RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 NLRP3Q96P20 1036 aa18.89■□□□□ 0.61
XRCC1-208ENST00000598422 NMRK2Q9NPI5 230 aa18.89■□□□□ 0.61
XRCC1-208ENST00000598422 LTBP3Q9NS15 1303 aa18.89■□□□□ 0.61
XRCC1-208ENST00000598422 PRELPP51888 382 aa18.88■□□□□ 0.61
XRCC1-208ENST00000598422 CCDC30Q5VVM6 783 aa18.88■□□□□ 0.61
XRCC1-208ENST00000598422 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
XRCC1-208ENST00000598422 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
XRCC1-208ENST00000598422 C8orf58Q8NAV2 365 aa18.88■□□□□ 0.61
XRCC1-208ENST00000598422 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
XRCC1-208ENST00000598422 RBM17Q96I25 401 aaKnown RBP18.88■□□□□ 0.61
XRCC1-208ENST00000598422 TRMT112Q9UI30 125 aaKnown RBP18.88■□□□□ 0.61
XRCC1-208ENST00000598422 SALL2Q9Y467 1007 aaPredicted RBP18.88■□□□□ 0.61
XRCC1-208ENST00000598422 IL16Q14005 1332 aa18.87■□□□□ 0.61
XRCC1-208ENST00000598422 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
XRCC1-208ENST00000598422 RTKN2Q8IZC4 609 aa18.87■□□□□ 0.61
XRCC1-208ENST00000598422 SH3TC1Q8TE82 1336 aa18.86■□□□□ 0.61
XRCC1-208ENST00000598422 C7orf43Q8WVR3 580 aa18.86■□□□□ 0.61
XRCC1-208ENST00000598422 TNRC6CQ9HCJ0 1690 aaKnown RBP18.85■□□□□ 0.61
XRCC1-208ENST00000598422 HOXA10P31260 410 aaPredicted RBP18.85■□□□□ 0.61
XRCC1-208ENST00000598422 FKBP4Q02790 459 aaKnown RBP eCLIP18.85■□□□□ 0.61
XRCC1-208ENST00000598422 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
XRCC1-208ENST00000598422 RIC3Q7Z5B4 369 aa18.85■□□□□ 0.61
XRCC1-208ENST00000598422 TMX4Q9H1E5 349 aaPredicted RBP18.85■□□□□ 0.61
XRCC1-208ENST00000598422 GLTPD2A6NH11 291 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 ATP5J2-PTCD1G3V325 749 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 DDX58O95786 925 aaKnown RBP18.84■□□□□ 0.61
XRCC1-208ENST00000598422 SLC10A5Q5PT55 438 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 CC2D2BQ6DHV5 1058 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 STK31Q9BXU1 1019 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 NUP98P52948 1817 aa18.84■□□□□ 0.61
XRCC1-208ENST00000598422 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
XRCC1-208ENST00000598422 TOMM70O94826 608 aa18.83■□□□□ 0.6
XRCC1-208ENST00000598422 HCLS1P14317 486 aaPredicted RBP18.83■□□□□ 0.6
XRCC1-208ENST00000598422 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
XRCC1-208ENST00000598422 OLFM4Q6UX06 510 aa18.83■□□□□ 0.6
XRCC1-208ENST00000598422 TSPYL6Q8N831 410 aa18.83■□□□□ 0.6
XRCC1-208ENST00000598422 PHAXQ9H814 394 aaKnown RBP18.83■□□□□ 0.6
XRCC1-208ENST00000598422 RRAGCQ9HB90 399 aa18.83■□□□□ 0.6
XRCC1-208ENST00000598422 SLX4Q8IY92 1834 aa18.82■□□□□ 0.6
XRCC1-208ENST00000598422 ZNF428Q96B54 188 aa18.82■□□□□ 0.6
XRCC1-208ENST00000598422 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
XRCC1-208ENST00000598422 ZNF277Q9NRM2 450 aaPredicted RBP18.82■□□□□ 0.6
XRCC1-208ENST00000598422 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
XRCC1-208ENST00000598422 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
XRCC1-208ENST00000598422 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
XRCC1-208ENST00000598422 GRIPAP1Q4V328 841 aa18.8■□□□□ 0.6
XRCC1-208ENST00000598422 DDX46Q7L014 1031 aaKnown RBP18.8■□□□□ 0.6
XRCC1-208ENST00000598422 SYNE4Q8N205 404 aa18.8■□□□□ 0.6
XRCC1-208ENST00000598422 ARFGEF2Q9Y6D5 1785 aa18.8■□□□□ 0.6
XRCC1-208ENST00000598422 ABCC4O15439 1325 aa18.79■□□□□ 0.6
XRCC1-208ENST00000598422 VEGFAP15692 232 aaPredicted RBP18.79■□□□□ 0.6
XRCC1-208ENST00000598422 RBM46Q8TBY0 533 aaKnown RBP18.79■□□□□ 0.6
XRCC1-208ENST00000598422 FAM89AQ96GI7 184 aa18.79■□□□□ 0.6
XRCC1-208ENST00000598422 PSMD1Q99460 953 aa18.79■□□□□ 0.6
XRCC1-208ENST00000598422 MYD88Q99836 296 aa18.79■□□□□ 0.6
XRCC1-208ENST00000598422 TIAM2Q8IVF5 1701 aa18.78■□□□□ 0.6
XRCC1-208ENST00000598422 HSPA6P17066 643 aa18.78■□□□□ 0.6
XRCC1-208ENST00000598422 IARSP41252 1262 aaKnown RBP18.78■□□□□ 0.6
XRCC1-208ENST00000598422 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
XRCC1-208ENST00000598422 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
XRCC1-208ENST00000598422 HSP90B1P14625 803 aaKnown RBP18.77■□□□□ 0.6
XRCC1-208ENST00000598422 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
XRCC1-208ENST00000598422 JDP2Q8WYK2 163 aa18.77■□□□□ 0.6
XRCC1-208ENST00000598422 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
XRCC1-208ENST00000598422 FER1L6Q2WGJ9 1857 aa18.76■□□□□ 0.59
XRCC1-208ENST00000598422 IRS4O14654 1257 aaPredicted RBP18.76■□□□□ 0.59
XRCC1-208ENST00000598422 BBOX1O75936 387 aa18.76■□□□□ 0.59
XRCC1-208ENST00000598422 GRAPQ13588 217 aa18.76■□□□□ 0.59
XRCC1-208ENST00000598422 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
XRCC1-208ENST00000598422 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
XRCC1-208ENST00000598422 CWC25Q9NXE8 425 aaPredicted RBP18.76■□□□□ 0.59
XRCC1-208ENST00000598422 MAP3K2Q9Y2U5 619 aa18.76■□□□□ 0.59
XRCC1-208ENST00000598422 ATP6V0A2Q9Y487 856 aa18.76■□□□□ 0.59
XRCC1-208ENST00000598422 CACNA1SQ13698 1873 aa18.75■□□□□ 0.59
XRCC1-208ENST00000598422 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
XRCC1-208ENST00000598422 NEXNQ0ZGT2 675 aa18.75■□□□□ 0.59
XRCC1-208ENST00000598422 ZBTB38Q8NAP3 1195 aaPredicted RBP18.75■□□□□ 0.59
XRCC1-208ENST00000598422 CCDC191Q8NCU4 936 aa18.75■□□□□ 0.59
XRCC1-208ENST00000598422 SBF1O95248 1867 aa18.75■□□□□ 0.59
XRCC1-208ENST00000598422 DDNO94850 711 aaPredicted RBP18.74■□□□□ 0.59
XRCC1-208ENST00000598422 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
XRCC1-208ENST00000598422 FSTL1Q12841 308 aa18.74■□□□□ 0.59
XRCC1-208ENST00000598422 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
XRCC1-208ENST00000598422 LARGE2Q8N3Y3 721 aa18.74■□□□□ 0.59
XRCC1-208ENST00000598422 SMC1BQ8NDV3 1235 aa18.74■□□□□ 0.59
XRCC1-208ENST00000598422 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
XRCC1-208ENST00000598422 PI4KAP2A4QPH2 592 aa18.73■□□□□ 0.59
XRCC1-208ENST00000598422 TMC4Q7Z404 712 aa18.73■□□□□ 0.59
XRCC1-208ENST00000598422 PI4KAP1Q8N8J0 262 aa18.73■□□□□ 0.59
XRCC1-208ENST00000598422 ZNF541Q9H0D2 1346 aa18.73■□□□□ 0.59
XRCC1-208ENST00000598422 IQCA1LA6NCM1 817 aa18.72■□□□□ 0.59
XRCC1-208ENST00000598422 EIF6P56537 245 aaKnown RBP18.72■□□□□ 0.59
XRCC1-208ENST00000598422 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
XRCC1-208ENST00000598422 DPP8Q6V1X1 898 aaPredicted RBP18.72■□□□□ 0.59
XRCC1-208ENST00000598422 SLC51AQ86UW1 340 aa18.72■□□□□ 0.59
XRCC1-208ENST00000598422 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
XRCC1-208ENST00000598422 NIM1KQ8IY84 436 aa18.72■□□□□ 0.59
XRCC1-208ENST00000598422 SUPT20HQ8NEM7 779 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms