RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 KCNB2Q92953 911 aa23.61■■□□□ 1.37
GRAMD1A-207ENST00000598118 NECTIN1Q15223 517 aa23.61■■□□□ 1.37
GRAMD1A-207ENST00000598118 JAKMIP1Q96N16 626 aaKnown RBP23.61■■□□□ 1.37
GRAMD1A-207ENST00000598118 GADD45BO75293 160 aaPredicted RBP23.6■■□□□ 1.37
GRAMD1A-207ENST00000598118 NMIQ13287 307 aaPredicted RBP23.6■■□□□ 1.37
GRAMD1A-207ENST00000598118 BOLA2Q9H3K6 86 aa23.6■■□□□ 1.37
GRAMD1A-207ENST00000598118 CCDC171Q6TFL3 1326 aa23.6■■□□□ 1.37
GRAMD1A-207ENST00000598118 DTNBO60941 627 aa23.59■■□□□ 1.37
GRAMD1A-207ENST00000598118 ANKRD13DQ6ZTN6 518 aa23.59■■□□□ 1.37
GRAMD1A-207ENST00000598118 DDX54Q8TDD1 881 aaKnown RBP23.59■■□□□ 1.37
GRAMD1A-207ENST00000598118 AFDNP55196 1824 aaKnown RBP23.59■■□□□ 1.37
GRAMD1A-207ENST00000598118 SNRPA1P09661 255 aaKnown RBP23.58■■□□□ 1.37
GRAMD1A-207ENST00000598118 COL9A3Q14050 684 aaPredicted RBP23.58■■□□□ 1.37
GRAMD1A-207ENST00000598118 USP48Q86UV5 1035 aa23.58■■□□□ 1.37
GRAMD1A-207ENST00000598118 ANP32BQ92688 251 aaKnown RBP23.58■■□□□ 1.37
GRAMD1A-207ENST00000598118 ZSWIM6Q9HCJ5 1215 aa23.58■■□□□ 1.37
GRAMD1A-207ENST00000598118 MRC1P22897 1456 aa23.58■■□□□ 1.37
GRAMD1A-207ENST00000598118 DCAF5Q96JK2 942 aa23.58■■□□□ 1.36
GRAMD1A-207ENST00000598118 RBM8AQ9Y5S9 174 aaKnown RBP23.58■■□□□ 1.36
GRAMD1A-207ENST00000598118 SYT1P21579 422 aa23.57■■□□□ 1.36
GRAMD1A-207ENST00000598118 PDRG1Q9NUG6 133 aa23.57■■□□□ 1.36
GRAMD1A-207ENST00000598118 A0A0D9SFI3 127 aa23.57■■□□□ 1.36
GRAMD1A-207ENST00000598118 VPS53Q5VIR6 699 aa23.57■■□□□ 1.36
GRAMD1A-207ENST00000598118 TTC5Q8N0Z6 440 aa23.57■■□□□ 1.36
GRAMD1A-207ENST00000598118 MAP4K1Q92918 833 aa23.57■■□□□ 1.36
GRAMD1A-207ENST00000598118 TM6SF1Q9BZW5 370 aa23.57■■□□□ 1.36
GRAMD1A-207ENST00000598118 PKD1L3Q7Z443 1732 aa23.56■■□□□ 1.36
GRAMD1A-207ENST00000598118 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.56■■□□□ 1.36
GRAMD1A-207ENST00000598118 ZSCAN22P10073 491 aaPredicted RBP23.56■■□□□ 1.36
GRAMD1A-207ENST00000598118 CREB3L3Q68CJ9 461 aa23.56■■□□□ 1.36
GRAMD1A-207ENST00000598118 CCDC83Q8IWF9 413 aa23.56■■□□□ 1.36
GRAMD1A-207ENST00000598118 ABCC6O95255 1503 aa23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 ARFGEF2Q9Y6D5 1785 aa23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 STX6O43752 255 aa23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 RFX5P48382 616 aaPredicted RBP23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 ST3GAL1Q11201 340 aa23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 SNRKQ9NRH2 765 aa23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 SMC3Q9UQE7 1217 aa23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 CYP46A1Q9Y6A2 500 aa23.55■■□□□ 1.36
GRAMD1A-207ENST00000598118 EDC3Q96F86 508 aaKnown RBP23.54■■□□□ 1.36
GRAMD1A-207ENST00000598118 FMNL2Q96PY5 1086 aa23.54■■□□□ 1.36
GRAMD1A-207ENST00000598118 TNS3Q68CZ2 1445 aa23.54■■□□□ 1.36
GRAMD1A-207ENST00000598118 FSD1Q9BTV5 496 aa23.54■■□□□ 1.36
GRAMD1A-207ENST00000598118 CNPY2Q9Y2B0 182 aa23.54■■□□□ 1.36
GRAMD1A-207ENST00000598118 ATP5J2-PTCD1G3V325 749 aa23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 HIP1O00291 1037 aa23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 PTCD1O75127 700 aaKnown RBP23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 GLI3P10071 1580 aa23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 PTPN12Q05209 780 aaKnown RBP23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 UBE3BQ7Z3V4 1068 aa23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 PDLIM2Q96JY6 352 aa23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 COPRSQ9NQ92 184 aa23.53■■□□□ 1.36
GRAMD1A-207ENST00000598118 DCCP43146 1447 aa23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 SLC27A2O14975 620 aa23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 ME3Q16798 604 aa23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 TMEM87AQ8NBN3 555 aa23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 ZKSCAN1P17029 563 aaPredicted RBP23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 GJB2P29033 226 aa23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 CABP4P57796 275 aa23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 DBNLQ9UJU6 430 aaKnown RBP23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 TAF6LQ9Y6J9 622 aa23.52■■□□□ 1.36
GRAMD1A-207ENST00000598118 F13A1P00488 732 aa23.51■■□□□ 1.35
GRAMD1A-207ENST00000598118 KCNJ4P48050 445 aa23.51■■□□□ 1.35
GRAMD1A-207ENST00000598118 ZNF589Q86UQ0 364 aaPredicted RBP23.51■■□□□ 1.35
GRAMD1A-207ENST00000598118 MED23Q9ULK4 1368 aa23.51■■□□□ 1.35
GRAMD1A-207ENST00000598118 SPATA31A3Q5VYP0 1347 aa23.51■■□□□ 1.35
GRAMD1A-207ENST00000598118 TFCP2Q12800 502 aa23.5■■□□□ 1.35
GRAMD1A-207ENST00000598118 RABL6Q3YEC7 729 aaPredicted RBP23.5■■□□□ 1.35
GRAMD1A-207ENST00000598118 RNF214Q8ND24 703 aa23.5■■□□□ 1.35
GRAMD1A-207ENST00000598118 TPCN1Q9ULQ1 816 aa23.5■■□□□ 1.35
GRAMD1A-207ENST00000598118 NECAB1Q8N987 351 aa23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 ZSCAN31Q96LW9 406 aaPredicted RBP23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 NDUFB9Q9Y6M9 179 aa23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 A0A087WZG4 1122 aa23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 TNNI3KQ59H18 835 aa23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 ZSCAN30Q86W11 494 aa23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 SH2B1Q9NRF2 756 aaPredicted RBP23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 FPGT-TNNI3KV9GXZ4 949 aa23.49■■□□□ 1.35
GRAMD1A-207ENST00000598118 CASP7P55210 303 aa23.48■■□□□ 1.35
GRAMD1A-207ENST00000598118 CADPS2Q86UW7 1296 aa23.48■■□□□ 1.35
GRAMD1A-207ENST00000598118 MTMR6Q9Y217 621 aa23.48■■□□□ 1.35
GRAMD1A-207ENST00000598118 LAMB4A4D0S4 1761 aa23.48■■□□□ 1.35
GRAMD1A-207ENST00000598118 SYAP1Q96A49 352 aaPredicted RBP23.48■■□□□ 1.35
GRAMD1A-207ENST00000598118 TCEANC2Q96MN5 208 aa23.48■■□□□ 1.35
GRAMD1A-207ENST00000598118 NBPF26B4DH59 902 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 NBPF10Q6P3W6 841 aaKnown RBP23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 NBPF15Q8N660 670 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 PLEKHG2Q9H7P9 1386 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 CHGBP05060 677 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 ATP5JP18859 108 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 TPRNQ4KMQ1 711 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 NAP1L5Q96NT1 182 aaPredicted RBP23.47■■□□□ 1.35
GRAMD1A-207ENST00000598118 CPDO75976 1380 aa23.46■■□□□ 1.35
GRAMD1A-207ENST00000598118 COL15A1P39059 1388 aa23.46■■□□□ 1.35
GRAMD1A-207ENST00000598118 JCADQ9P266 1359 aa23.46■■□□□ 1.35
GRAMD1A-207ENST00000598118 TSPY26PQ9H489 355 aa23.46■■□□□ 1.35
GRAMD1A-207ENST00000598118 TAF5LO75529 589 aa23.45■■□□□ 1.34
GRAMD1A-207ENST00000598118 DBNDD2Q9BQY9 259 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms