RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 NYXQ9GZU5 481 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-206ENST00000597047 UBN2Q6ZU65 1347 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
ZNF548-206ENST00000597047 NEURL1BA8MQ27 555 aa11.76□□□□□ -0.53
ZNF548-206ENST00000597047 IGKV5-2P06315 115 aa11.76□□□□□ -0.53
ZNF548-206ENST00000597047 HCLS1P14317 486 aaPredicted RBP11.76□□□□□ -0.53
ZNF548-206ENST00000597047 TRIM27P14373 513 aa11.76□□□□□ -0.53
ZNF548-206ENST00000597047 PARP10Q53GL7 1025 aa11.76□□□□□ -0.53
ZNF548-206ENST00000597047 BEND3Q5T5X7 828 aa11.76□□□□□ -0.53
ZNF548-206ENST00000597047 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
ZNF548-206ENST00000597047 LINS1Q8NG48 757 aa11.76□□□□□ -0.53
ZNF548-206ENST00000597047 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
ZNF548-206ENST00000597047 ANKRD36CQ5JPF3 1778 aa11.75□□□□□ -0.53
ZNF548-206ENST00000597047 PTGER2P43116 358 aa11.75□□□□□ -0.53
ZNF548-206ENST00000597047 IRX6P78412 446 aaPredicted RBP11.75□□□□□ -0.53
ZNF548-206ENST00000597047 PRR5LQ6MZQ0 368 aa11.75□□□□□ -0.53
ZNF548-206ENST00000597047 ITPRIPQ8IWB1 547 aa11.75□□□□□ -0.53
ZNF548-206ENST00000597047 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
ZNF548-206ENST00000597047 CCDC191Q8NCU4 936 aa11.75□□□□□ -0.53
ZNF548-206ENST00000597047 CCDC85AQ96PX6 553 aaPredicted RBP11.75□□□□□ -0.53
ZNF548-206ENST00000597047 MS4A1P11836 297 aa11.74□□□□□ -0.53
ZNF548-206ENST00000597047 CCT4P50991 539 aaKnown RBP11.74□□□□□ -0.53
ZNF548-206ENST00000597047 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
ZNF548-206ENST00000597047 RRP1P56182 461 aaKnown RBP11.74□□□□□ -0.53
ZNF548-206ENST00000597047 GCKRQ14397 625 aa11.74□□□□□ -0.53
ZNF548-206ENST00000597047 C20orf194Q5TEA3 1177 aa11.74□□□□□ -0.53
ZNF548-206ENST00000597047 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
ZNF548-206ENST00000597047 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
ZNF548-206ENST00000597047 ARHGAP45Q92619 1136 aa11.74□□□□□ -0.53
ZNF548-206ENST00000597047 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
ZNF548-206ENST00000597047 IRS4O14654 1257 aaPredicted RBP11.73□□□□□ -0.53
ZNF548-206ENST00000597047 NTSR2O95665 410 aa11.73□□□□□ -0.53
ZNF548-206ENST00000597047 RLBP1P12271 317 aa11.73□□□□□ -0.53
ZNF548-206ENST00000597047 SH3TC1Q8TE82 1336 aa11.73□□□□□ -0.53
ZNF548-206ENST00000597047 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.53
ZNF548-206ENST00000597047 ATP10DQ9P241 1426 aa11.73□□□□□ -0.53
ZNF548-206ENST00000597047 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
ZNF548-206ENST00000597047 A0A0G2JLW4 131 aa11.72□□□□□ -0.53
ZNF548-206ENST00000597047 ALDH1L1O75891 902 aa11.72□□□□□ -0.53
ZNF548-206ENST00000597047 CHRNA5P30532 468 aa11.72□□□□□ -0.53
ZNF548-206ENST00000597047 C2CD5Q86YS7 1000 aa11.72□□□□□ -0.53
ZNF548-206ENST00000597047 ZBTB38Q8NAP3 1195 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-206ENST00000597047 NLRP3Q96P20 1036 aa11.72□□□□□ -0.53
ZNF548-206ENST00000597047 SGIP1Q9BQI5 828 aa11.72□□□□□ -0.53
ZNF548-206ENST00000597047 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-206ENST00000597047 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-206ENST00000597047 ABCC4O15439 1325 aa11.71□□□□□ -0.53
ZNF548-206ENST00000597047 H0YIN7 160 aa11.71□□□□□ -0.53
ZNF548-206ENST00000597047 GRM8O00222 908 aa11.71□□□□□ -0.53
ZNF548-206ENST00000597047 RGL2O15211 777 aa11.71□□□□□ -0.53
ZNF548-206ENST00000597047 PCCAP05165 728 aaPredicted RBP11.71□□□□□ -0.53
ZNF548-206ENST00000597047 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
ZNF548-206ENST00000597047 ABCC12Q96J65 1359 aa11.7□□□□□ -0.54
ZNF548-206ENST00000597047 H7C1W4 665 aa11.7□□□□□ -0.54
ZNF548-206ENST00000597047 NBPF7P0C2Y1 421 aaPredicted RBP11.7□□□□□ -0.54
ZNF548-206ENST00000597047 UBTFL1P0CB47 393 aaPredicted RBP11.7□□□□□ -0.54
ZNF548-206ENST00000597047 DPEP1P16444 411 aa11.7□□□□□ -0.54
ZNF548-206ENST00000597047 PDE6BP35913 854 aa11.7□□□□□ -0.54
ZNF548-206ENST00000597047 INTS3Q68E01 1043 aaKnown RBP11.7□□□□□ -0.54
ZNF548-206ENST00000597047 C3orf67Q6ZVT6 689 aa11.7□□□□□ -0.54
ZNF548-206ENST00000597047 NLGN2Q8NFZ4 835 aa11.7□□□□□ -0.54
ZNF548-206ENST00000597047 RPGRQ92834 1020 aaKnown RBP11.7□□□□□ -0.54
ZNF548-206ENST00000597047 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
ZNF548-206ENST00000597047 SUCLG2Q96I99 432 aa11.69□□□□□ -0.54
ZNF548-206ENST00000597047 MEIS3Q99687 375 aa11.69□□□□□ -0.54
ZNF548-206ENST00000597047 USP44Q9H0E7 712 aa11.69□□□□□ -0.54
ZNF548-206ENST00000597047 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
ZNF548-206ENST00000597047 PDE8AO60658 829 aa11.68□□□□□ -0.54
ZNF548-206ENST00000597047 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
ZNF548-206ENST00000597047 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
ZNF548-206ENST00000597047 CD2APQ9Y5K6 639 aa11.68□□□□□ -0.54
ZNF548-206ENST00000597047 N4BP2Q86UW6 1770 aaPredicted RBP11.68□□□□□ -0.54
ZNF548-206ENST00000597047 COL24A1Q17RW2 1714 aa11.68□□□□□ -0.54
ZNF548-206ENST00000597047 GNAI3P08754 354 aa11.67□□□□□ -0.54
ZNF548-206ENST00000597047 PDE3AQ14432 1141 aa11.67□□□□□ -0.54
ZNF548-206ENST00000597047 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
ZNF548-206ENST00000597047 TAF7LQ5H9L4 462 aa11.67□□□□□ -0.54
ZNF548-206ENST00000597047 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
ZNF548-206ENST00000597047 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
ZNF548-206ENST00000597047 SYT17Q9BSW7 474 aa11.67□□□□□ -0.54
ZNF548-206ENST00000597047 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
ZNF548-206ENST00000597047 PXDNLA1KZ92 1463 aa11.67□□□□□ -0.54
ZNF548-206ENST00000597047 RNF123Q5XPI4 1314 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 ANKRD31Q8N7Z5 1873 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 GNAI2P04899 355 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 TGFB2P61812 414 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 CCDC152Q4G0S7 254 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 EPHA10Q5JZY3 1008 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 SLC10A5Q5PT55 438 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
ZNF548-206ENST00000597047 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 BICC1Q9H694 974 aaKnown RBP11.66□□□□□ -0.54
ZNF548-206ENST00000597047 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 C10orf71Q711Q0 1435 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 CACNA1SQ13698 1873 aa11.66□□□□□ -0.54
ZNF548-206ENST00000597047 TNRC6CQ9HCJ0 1690 aaKnown RBP11.65□□□□□ -0.54
ZNF548-206ENST00000597047 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 NPR1P16066 1061 aa11.65□□□□□ -0.54
ZNF548-206ENST00000597047 CASP7P55210 303 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms