RNA–Protein interactions for RNA: ENST00000596941.5

GTPBP3-215, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-215ENST00000596941 CCDC27Q2M243 656 aa22.73■■□□□ 1.23
GTPBP3-215ENST00000596941 OLFM4Q6UX06 510 aa22.73■■□□□ 1.23
GTPBP3-215ENST00000596941 C8orf58Q8NAV2 365 aa22.73■■□□□ 1.23
GTPBP3-215ENST00000596941 TAOK3Q9H2K8 898 aa22.73■■□□□ 1.23
GTPBP3-215ENST00000596941 SNED1Q8TER0 1413 aa22.73■■□□□ 1.23
GTPBP3-215ENST00000596941 HSP90AB3PQ58FF7 597 aa22.72■■□□□ 1.23
GTPBP3-215ENST00000596941 PPP1R42Q7Z4L9 355 aa22.72■■□□□ 1.23
GTPBP3-215ENST00000596941 NLRP10Q86W26 655 aa22.72■■□□□ 1.23
GTPBP3-215ENST00000596941 WWC1Q8IX03 1113 aa22.72■■□□□ 1.23
GTPBP3-215ENST00000596941 TSR2Q969E8 191 aaKnown RBP22.72■■□□□ 1.23
GTPBP3-215ENST00000596941 TCIRG1Q13488 830 aa22.71■■□□□ 1.23
GTPBP3-215ENST00000596941 CCDC93Q567U6 631 aa22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 SOGA3Q5TF21 947 aa22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 SLC51AQ86UW1 340 aa22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 PLBD2Q8NHP8 589 aa22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 UTP14AQ9BVJ6 771 aaKnown RBP22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 HYPKQ9NX55 129 aa22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 KDM2BQ8NHM5 1336 aa22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 WDR90Q96KV7 1748 aa22.7■■□□□ 1.22
GTPBP3-215ENST00000596941 TSPYL6Q8N831 410 aa22.69■■□□□ 1.22
GTPBP3-215ENST00000596941 ZNF428Q96B54 188 aa22.69■■□□□ 1.22
GTPBP3-215ENST00000596941 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
GTPBP3-215ENST00000596941 HOXA10P31260 410 aaPredicted RBP22.68■■□□□ 1.22
GTPBP3-215ENST00000596941 SYNE4Q8N205 404 aa22.68■■□□□ 1.22
GTPBP3-215ENST00000596941 RPGRQ92834 1020 aaKnown RBP22.68■■□□□ 1.22
GTPBP3-215ENST00000596941 ALDH1B1P30837 517 aa22.67■■□□□ 1.22
GTPBP3-215ENST00000596941 ANKRD13DQ6ZTN6 518 aa22.67■■□□□ 1.22
GTPBP3-215ENST00000596941 PHAXQ9H814 394 aaKnown RBP22.67■■□□□ 1.22
GTPBP3-215ENST00000596941 SLC10A5Q5PT55 438 aa22.66■■□□□ 1.22
GTPBP3-215ENST00000596941 ISCA1Q9BUE6 129 aa22.66■■□□□ 1.22
GTPBP3-215ENST00000596941 CACNA1FO60840 1977 aa22.66■■□□□ 1.22
GTPBP3-215ENST00000596941 IL16Q14005 1332 aa22.65■■□□□ 1.22
GTPBP3-215ENST00000596941 GLTPD2A6NH11 291 aa22.65■■□□□ 1.22
GTPBP3-215ENST00000596941 ATP5J2-PTCD1G3V325 749 aa22.65■■□□□ 1.22
GTPBP3-215ENST00000596941 NCBP3Q53F19 620 aaKnown RBP22.65■■□□□ 1.22
GTPBP3-215ENST00000596941 RRAGCQ9HB90 399 aa22.65■■□□□ 1.22
GTPBP3-215ENST00000596941 SALL2Q9Y467 1007 aaPredicted RBP22.65■■□□□ 1.22
GTPBP3-215ENST00000596941 COL4A5P29400 1685 aa22.65■■□□□ 1.22
GTPBP3-215ENST00000596941 SH3TC1Q8TE82 1336 aa22.64■■□□□ 1.22
GTPBP3-215ENST00000596941 TOMM70O94826 608 aa22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 HCLS1P14317 486 aaPredicted RBP22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 FKBP4Q02790 459 aaKnown RBP eCLIP22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 NLRP3Q96P20 1036 aa22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 TRMT112Q9UI30 125 aaKnown RBP22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 LRRC37AA6NMS7 1700 aa22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 COL4A1P02462 1669 aa22.64■■□□□ 1.21
GTPBP3-215ENST00000596941 CRAMP1Q96RY5 1269 aa22.63■■□□□ 1.21
GTPBP3-215ENST00000596941 FANCIQ9NVI1 1328 aa22.62■■□□□ 1.21
GTPBP3-215ENST00000596941 GOLGA2Q08379 1002 aa22.62■■□□□ 1.21
GTPBP3-215ENST00000596941 RBM17Q96I25 401 aaKnown RBP22.62■■□□□ 1.21
GTPBP3-215ENST00000596941 ZNF277Q9NRM2 450 aaPredicted RBP22.62■■□□□ 1.21
GTPBP3-215ENST00000596941 ABCC4O15439 1325 aa22.61■■□□□ 1.21
GTPBP3-215ENST00000596941 PPEF1O14829 653 aaPredicted RBP22.61■■□□□ 1.21
GTPBP3-215ENST00000596941 CCDC30Q5VVM6 783 aa22.61■■□□□ 1.21
GTPBP3-215ENST00000596941 RTKN2Q8IZC4 609 aa22.61■■□□□ 1.21
GTPBP3-215ENST00000596941 TCERG1O14776 1098 aaKnown RBP22.6■■□□□ 1.21
GTPBP3-215ENST00000596941 HSPA6P17066 643 aa22.6■■□□□ 1.21
GTPBP3-215ENST00000596941 TWISTNBQ3B726 338 aaPredicted RBP22.6■■□□□ 1.21
GTPBP3-215ENST00000596941 RIC3Q7Z5B4 369 aa22.6■■□□□ 1.21
GTPBP3-215ENST00000596941 SCN4AP35499 1836 aa22.59■■□□□ 1.21
GTPBP3-215ENST00000596941 MYH3P11055 1940 aa22.59■■□□□ 1.21
GTPBP3-215ENST00000596941 POTECB2RU33 542 aa22.58■■□□□ 1.21
GTPBP3-215ENST00000596941 CC2D2BQ6DHV5 1058 aa22.58■■□□□ 1.21
GTPBP3-215ENST00000596941 C16orf71Q8IYS4 520 aaPredicted RBP22.58■■□□□ 1.21
GTPBP3-215ENST00000596941 RBM46Q8TBY0 533 aaKnown RBP22.58■■□□□ 1.21
GTPBP3-215ENST00000596941 FAM89AQ96GI7 184 aa22.58■■□□□ 1.21
GTPBP3-215ENST00000596941 PSMD1Q99460 953 aa22.58■■□□□ 1.21
GTPBP3-215ENST00000596941 IARSP41252 1262 aaKnown RBP22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 TRIM28Q13263 835 aaKnown RBP22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 MYD88Q99836 296 aa22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 SPINK5Q9NQ38 1064 aaPredicted RBP22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 DUOX1Q9NRD9 1551 aa22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 ZNF541Q9H0D2 1346 aa22.57■■□□□ 1.2
GTPBP3-215ENST00000596941 DDNO94850 711 aaPredicted RBP22.56■■□□□ 1.2
GTPBP3-215ENST00000596941 VEGFAP15692 232 aaPredicted RBP22.56■■□□□ 1.2
GTPBP3-215ENST00000596941 DPY19L2Q6NUT2 758 aa22.56■■□□□ 1.2
GTPBP3-215ENST00000596941 LTBP1Q14766 1721 aa22.55■■□□□ 1.2
GTPBP3-215ENST00000596941 G2E3Q7L622 706 aa22.55■■□□□ 1.2
GTPBP3-215ENST00000596941 CEP350Q5VT06 3117 aa22.55■■□□□ 1.2
GTPBP3-215ENST00000596941 METTL22Q9BUU2 404 aaPredicted RBP22.54■■□□□ 1.2
GTPBP3-215ENST00000596941 STK31Q9BXU1 1019 aa22.54■■□□□ 1.2
GTPBP3-215ENST00000596941 CHMP4AQ9BY43 222 aa22.54■■□□□ 1.2
GTPBP3-215ENST00000596941 ATP6V0A2Q9Y487 856 aa22.54■■□□□ 1.2
GTPBP3-215ENST00000596941 SPEF2Q9C093 1822 aa22.54■■□□□ 1.2
GTPBP3-215ENST00000596941 DDX58O95786 925 aaKnown RBP22.53■■□□□ 1.2
GTPBP3-215ENST00000596941 GRAPQ13588 217 aa22.53■■□□□ 1.2
GTPBP3-215ENST00000596941 GRAPLQ8TC17 118 aaPredicted RBP22.53■■□□□ 1.2
GTPBP3-215ENST00000596941 MAP3K2Q9Y2U5 619 aa22.53■■□□□ 1.2
GTPBP3-215ENST00000596941 IRS4O14654 1257 aaPredicted RBP22.52■■□□□ 1.2
GTPBP3-215ENST00000596941 EXOSC9Q06265 439 aaKnown RBP22.52■■□□□ 1.2
GTPBP3-215ENST00000596941 DDX46Q7L014 1031 aaKnown RBP22.52■■□□□ 1.2
GTPBP3-215ENST00000596941 PI4KAP2A4QPH2 592 aa22.51■■□□□ 1.19
GTPBP3-215ENST00000596941 SF3B3Q15393 1217 aaKnown RBP22.51■■□□□ 1.19
GTPBP3-215ENST00000596941 KSR2Q6VAB6 950 aa22.51■■□□□ 1.19
GTPBP3-215ENST00000596941 PI4KAP1Q8N8J0 262 aa22.51■■□□□ 1.19
GTPBP3-215ENST00000596941 ZBTB38Q8NAP3 1195 aaPredicted RBP22.51■■□□□ 1.19
GTPBP3-215ENST00000596941 CCDC191Q8NCU4 936 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms