RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 NPR1P16066 1061 aa27.17■■□□□ 1.94
PNKP-209ENST00000596726 ISCA1Q9BUE6 129 aa27.17■■□□□ 1.94
PNKP-209ENST00000596726 UTP14AQ9BVJ6 771 aaKnown RBP27.17■■□□□ 1.94
PNKP-209ENST00000596726 ADCY9O60503 1353 aa27.17■■□□□ 1.94
PNKP-209ENST00000596726 EXOSC9Q06265 439 aaKnown RBP27.16■■□□□ 1.94
PNKP-209ENST00000596726 CRY2Q49AN0 593 aa27.16■■□□□ 1.94
PNKP-209ENST00000596726 MYH16Q9H6N6 1097 aa27.16■■□□□ 1.94
PNKP-209ENST00000596726 RNF123Q5XPI4 1314 aa27.16■■□□□ 1.94
PNKP-209ENST00000596726 VAMP4O75379 141 aa27.15■■□□□ 1.94
PNKP-209ENST00000596726 SLC10A5Q5PT55 438 aa27.15■■□□□ 1.94
PNKP-209ENST00000596726 MIER1Q8N108 512 aa27.15■■□□□ 1.94
PNKP-209ENST00000596726 STK31Q9BXU1 1019 aa27.14■■□□□ 1.94
PNKP-209ENST00000596726 TRIM28Q13263 835 aaKnown RBP27.13■■□□□ 1.93
PNKP-209ENST00000596726 PRPF40BQ6NWY9 871 aaKnown RBP27.13■■□□□ 1.93
PNKP-209ENST00000596726 RIC3Q7Z5B4 369 aa27.13■■□□□ 1.93
PNKP-209ENST00000596726 FER1L6Q2WGJ9 1857 aa27.13■■□□□ 1.93
PNKP-209ENST00000596726 TCERG1O14776 1098 aaKnown RBP27.12■■□□□ 1.93
PNKP-209ENST00000596726 C21orf2O43822 256 aa27.11■■□□□ 1.93
PNKP-209ENST00000596726 CCDC88AQ3V6T2 1871 aa27.1■■□□□ 1.93
PNKP-209ENST00000596726 LAMB2P55268 1798 aa27.1■■□□□ 1.93
PNKP-209ENST00000596726 ATP5J2-PTCD1G3V325 749 aa27.1■■□□□ 1.93
PNKP-209ENST00000596726 DDX58O95786 925 aaKnown RBP27.1■■□□□ 1.93
PNKP-209ENST00000596726 SLC4A2P04920 1241 aa27.1■■□□□ 1.93
PNKP-209ENST00000596726 C7orf43Q8WVR3 580 aa27.1■■□□□ 1.93
PNKP-209ENST00000596726 TRMT112Q9UI30 125 aaKnown RBP27.1■■□□□ 1.93
PNKP-209ENST00000596726 HOXA10P31260 410 aaPredicted RBP27.09■■□□□ 1.93
PNKP-209ENST00000596726 C3orf67Q6ZVT6 689 aa27.09■■□□□ 1.93
PNKP-209ENST00000596726 G2E3Q7L622 706 aa27.09■■□□□ 1.93
PNKP-209ENST00000596726 SYNE4Q8N205 404 aa27.09■■□□□ 1.93
PNKP-209ENST00000596726 SH3TC1Q8TE82 1336 aa27.09■■□□□ 1.93
PNKP-209ENST00000596726 NFKBIEO00221 500 aa27.08■■□□□ 1.93
PNKP-209ENST00000596726 ALDH1B1P30837 517 aa27.08■■□□□ 1.93
PNKP-209ENST00000596726 C9orf131Q5VYM1 1079 aa27.08■■□□□ 1.93
PNKP-209ENST00000596726 NLRP3Q96P20 1036 aa27.08■■□□□ 1.93
PNKP-209ENST00000596726 ZNF219Q9P2Y4 722 aaPredicted RBP27.08■■□□□ 1.93
PNKP-209ENST00000596726 RASSF7Q02833 373 aa27.07■■□□□ 1.92
PNKP-209ENST00000596726 KSR2Q6VAB6 950 aa27.07■■□□□ 1.92
PNKP-209ENST00000596726 METTL22Q9BUU2 404 aaPredicted RBP27.07■■□□□ 1.92
PNKP-209ENST00000596726 DDX60Q8IY21 1712 aaKnown RBP27.07■■□□□ 1.92
PNKP-209ENST00000596726 PRELPP51888 382 aa27.06■■□□□ 1.92
PNKP-209ENST00000596726 MYD88Q99836 296 aa27.06■■□□□ 1.92
PNKP-209ENST00000596726 PI4KAP2A4QPH2 592 aa27.05■■□□□ 1.92
PNKP-209ENST00000596726 E9PSI1 815 aa27.05■■□□□ 1.92
PNKP-209ENST00000596726 SLFN5Q08AF3 891 aa27.05■■□□□ 1.92
PNKP-209ENST00000596726 SOGA3Q5TF21 947 aa27.05■■□□□ 1.92
PNKP-209ENST00000596726 PI4KAP1Q8N8J0 262 aa27.05■■□□□ 1.92
PNKP-209ENST00000596726 RPGRQ92834 1020 aaKnown RBP27.05■■□□□ 1.92
PNKP-209ENST00000596726 MAP3K2Q9Y2U5 619 aa27.05■■□□□ 1.92
PNKP-209ENST00000596726 HCLS1P14317 486 aaPredicted RBP27.04■■□□□ 1.92
PNKP-209ENST00000596726 ZNF428Q96B54 188 aa27.04■■□□□ 1.92
PNKP-209ENST00000596726 CRAMP1Q96RY5 1269 aa27.04■■□□□ 1.92
PNKP-209ENST00000596726 FLIIQ13045 1269 aa27.03■■□□□ 1.92
PNKP-209ENST00000596726 CCDC191Q8NCU4 936 aa27.03■■□□□ 1.92
PNKP-209ENST00000596726 FAM89AQ96GI7 184 aa27.03■■□□□ 1.92
PNKP-209ENST00000596726 RBM17Q96I25 401 aaKnown RBP27.03■■□□□ 1.92
PNKP-209ENST00000596726 LTBP3Q9NS15 1303 aa27.03■■□□□ 1.92
PNKP-209ENST00000596726 RNF181Q9P0P0 153 aa27.03■■□□□ 1.92
PNKP-209ENST00000596726 DICER1Q9UPY3 1922 aaKnown RBP27.02■■□□□ 1.92
PNKP-209ENST00000596726 LMNB1P20700 586 aa27.02■■□□□ 1.92
PNKP-209ENST00000596726 CCDC93Q567U6 631 aa27■■□□□ 1.91
PNKP-209ENST00000596726 TRMT2AQ8IZ69 625 aaKnown RBP27■■□□□ 1.91
PNKP-209ENST00000596726 ZBTB38Q8NAP3 1195 aaPredicted RBP27■■□□□ 1.91
PNKP-209ENST00000596726 CDCA7LQ96GN5 454 aa27■■□□□ 1.91
PNKP-209ENST00000596726 IGKV5-2P06315 115 aa26.99■■□□□ 1.91
PNKP-209ENST00000596726 OLFM4Q6UX06 510 aa26.99■■□□□ 1.91
PNKP-209ENST00000596726 CWC25Q9NXE8 425 aaPredicted RBP26.99■■□□□ 1.91
PNKP-209ENST00000596726 SNED1Q8TER0 1413 aa26.99■■□□□ 1.91
PNKP-209ENST00000596726 TAOK3Q9H2K8 898 aa26.98■■□□□ 1.91
PNKP-209ENST00000596726 TAF1P21675 1872 aa26.98■■□□□ 1.91
PNKP-209ENST00000596726 ZC3H4Q9UPT8 1303 aaKnown RBP26.97■■□□□ 1.91
PNKP-209ENST00000596726 PCCAP05165 728 aaPredicted RBP26.97■■□□□ 1.91
PNKP-209ENST00000596726 FKBP5Q13451 457 aaPredicted RBP26.97■■□□□ 1.91
PNKP-209ENST00000596726 SF3B3Q15393 1217 aaKnown RBP26.97■■□□□ 1.91
PNKP-209ENST00000596726 ABCC4O15439 1325 aa26.96■■□□□ 1.91
PNKP-209ENST00000596726 IRS4O14654 1257 aaPredicted RBP26.96■■□□□ 1.91
PNKP-209ENST00000596726 NEXNQ0ZGT2 675 aa26.96■■□□□ 1.91
PNKP-209ENST00000596726 RTL5Q5HYW3 569 aaPredicted RBP26.96■■□□□ 1.91
PNKP-209ENST00000596726 CC2D2BQ6DHV5 1058 aa26.96■■□□□ 1.91
PNKP-209ENST00000596726 RTKN2Q8IZC4 609 aa26.96■■□□□ 1.91
PNKP-209ENST00000596726 GPBP1L1Q9HC44 474 aaPredicted RBP26.96■■□□□ 1.91
PNKP-209ENST00000596726 TIAM2Q8IVF5 1701 aa26.96■■□□□ 1.91
PNKP-209ENST00000596726 ZNF526Q8TF50 670 aaPredicted RBP26.95■■□□□ 1.9
PNKP-209ENST00000596726 DNAAF4Q8WXU2 420 aa26.95■■□□□ 1.9
PNKP-209ENST00000596726 NEURL1BA8MQ27 555 aa26.94■■□□□ 1.9
PNKP-209ENST00000596726 PPEF1O14829 653 aaPredicted RBP26.94■■□□□ 1.9
PNKP-209ENST00000596726 FKBP4Q02790 459 aaKnown RBP eCLIP26.94■■□□□ 1.9
PNKP-209ENST00000596726 CWF19L2Q2TBE0 894 aaKnown RBP26.93■■□□□ 1.9
PNKP-209ENST00000596726 BBOX1O75936 387 aa26.92■■□□□ 1.9
PNKP-209ENST00000596726 GRIPAP1Q4V328 841 aa26.92■■□□□ 1.9
PNKP-209ENST00000596726 DDX46Q7L014 1031 aaKnown RBP26.92■■□□□ 1.9
PNKP-209ENST00000596726 CDHR2Q9BYE9 1310 aa26.91■■□□□ 1.9
PNKP-209ENST00000596726 HSP90B1P14625 803 aaKnown RBP26.91■■□□□ 1.9
PNKP-209ENST00000596726 GRAPQ13588 217 aa26.91■■□□□ 1.9
PNKP-209ENST00000596726 SLC51AQ86UW1 340 aa26.91■■□□□ 1.9
PNKP-209ENST00000596726 GRAPLQ8TC17 118 aaPredicted RBP26.91■■□□□ 1.9
PNKP-209ENST00000596726 JARID2Q92833 1246 aaPredicted RBP26.91■■□□□ 1.9
PNKP-209ENST00000596726 PSMD1Q99460 953 aa26.91■■□□□ 1.9
PNKP-209ENST00000596726 ATP6V0A2Q9Y487 856 aa26.91■■□□□ 1.9
PNKP-209ENST00000596726 LINS1Q8NG48 757 aa26.9■■□□□ 1.9
PNKP-209ENST00000596726 MYH3P11055 1940 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms