RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 DUSP27Q5VZP5 1158 aa33■■■□□ 2.87
ZNF558-203ENST00000595786 DPY19L2Q6NUT2 758 aa33■■■□□ 2.87
ZNF558-203ENST00000595786 RRAGCQ9HB90 399 aa33■■■□□ 2.87
ZNF558-203ENST00000595786 TNRC6CQ9HCJ0 1690 aaKnown RBP32.99■■■□□ 2.87
ZNF558-203ENST00000595786 AIMP1Q12904 312 aaKnown RBP32.99■■■□□ 2.87
ZNF558-203ENST00000595786 RTKN2Q8IZC4 609 aa32.99■■■□□ 2.87
ZNF558-203ENST00000595786 UTP14AQ9BVJ6 771 aaKnown RBP32.99■■■□□ 2.87
ZNF558-203ENST00000595786 CHPF2Q9P2E5 772 aa32.99■■■□□ 2.87
ZNF558-203ENST00000595786 ANP32CO43423 234 aa32.98■■■□□ 2.87
ZNF558-203ENST00000595786 TCIRG1Q13488 830 aa32.98■■■□□ 2.87
ZNF558-203ENST00000595786 CCDC184Q52MB2 194 aa32.98■■■□□ 2.87
ZNF558-203ENST00000595786 SLC10A5Q5PT55 438 aa32.98■■■□□ 2.87
ZNF558-203ENST00000595786 CC2D2BQ6DHV5 1058 aa32.97■■■□□ 2.87
ZNF558-203ENST00000595786 RPGRQ92834 1020 aaKnown RBP32.97■■■□□ 2.87
ZNF558-203ENST00000595786 HYPKQ9NX55 129 aa32.97■■■□□ 2.87
ZNF558-203ENST00000595786 CHMP4AQ9BY43 222 aa32.96■■■□□ 2.87
ZNF558-203ENST00000595786 TIAM2Q8IVF5 1701 aa32.96■■■□□ 2.87
ZNF558-203ENST00000595786 VEGFAP15692 232 aaPredicted RBP32.95■■■□□ 2.87
ZNF558-203ENST00000595786 FKBP4Q02790 459 aaKnown RBP eCLIP32.95■■■□□ 2.87
ZNF558-203ENST00000595786 NCBP3Q53F19 620 aaKnown RBP32.95■■■□□ 2.87
ZNF558-203ENST00000595786 NLRP3Q96P20 1036 aa32.95■■■□□ 2.87
ZNF558-203ENST00000595786 CRAMP1Q96RY5 1269 aa32.95■■■□□ 2.87
ZNF558-203ENST00000595786 CCDC27Q2M243 656 aa32.94■■■□□ 2.86
ZNF558-203ENST00000595786 GRIPAP1Q4V328 841 aa32.94■■■□□ 2.86
ZNF558-203ENST00000595786 NLRP10Q86W26 655 aa32.94■■■□□ 2.86
ZNF558-203ENST00000595786 PLBD2Q8NHP8 589 aa32.94■■■□□ 2.86
ZNF558-203ENST00000595786 FSTL1Q12841 308 aa32.93■■■□□ 2.86
ZNF558-203ENST00000595786 ANKRD13DQ6ZTN6 518 aa32.93■■■□□ 2.86
ZNF558-203ENST00000595786 RBM17Q96I25 401 aaKnown RBP32.93■■■□□ 2.86
ZNF558-203ENST00000595786 ANKRD36CQ5JPF3 1778 aa32.91■■■□□ 2.86
ZNF558-203ENST00000595786 MRS2Q9HD23 443 aa32.9■■■□□ 2.86
ZNF558-203ENST00000595786 PSMD1Q99460 953 aa32.89■■■□□ 2.86
ZNF558-203ENST00000595786 APLP1P51693 650 aa32.88■■■□□ 2.85
ZNF558-203ENST00000595786 TRMT112Q9UI30 125 aaKnown RBP32.87■■■□□ 2.85
ZNF558-203ENST00000595786 WDR90Q96KV7 1748 aa32.86■■■□□ 2.85
ZNF558-203ENST00000595786 SH3TC1Q8TE82 1336 aa32.86■■■□□ 2.85
ZNF558-203ENST00000595786 CEP350Q5VT06 3117 aa32.86■■■□□ 2.85
ZNF558-203ENST00000595786 OLFM4Q6UX06 510 aa32.86■■■□□ 2.85
ZNF558-203ENST00000595786 C3orf67Q6ZVT6 689 aa32.85■■■□□ 2.85
ZNF558-203ENST00000595786 SYNE4Q8N205 404 aa32.85■■■□□ 2.85
ZNF558-203ENST00000595786 SMC1BQ8NDV3 1235 aa32.85■■■□□ 2.85
ZNF558-203ENST00000595786 ISCA1Q9BUE6 129 aa32.85■■■□□ 2.85
ZNF558-203ENST00000595786 SNED1Q8TER0 1413 aa32.85■■■□□ 2.85
ZNF558-203ENST00000595786 POTECB2RU33 542 aa32.84■■■□□ 2.85
ZNF558-203ENST00000595786 TRIM28Q13263 835 aaKnown RBP32.84■■■□□ 2.85
ZNF558-203ENST00000595786 WWC1Q8IX03 1113 aa32.84■■■□□ 2.85
ZNF558-203ENST00000595786 C8orf58Q8NAV2 365 aa32.84■■■□□ 2.85
ZNF558-203ENST00000595786 ZNF277Q9NRM2 450 aaPredicted RBP32.84■■■□□ 2.85
ZNF558-203ENST00000595786 ELL2O00472 640 aaPredicted RBP32.83■■■□□ 2.85
ZNF558-203ENST00000595786 IL16Q14005 1332 aa32.82■■■□□ 2.84
ZNF558-203ENST00000595786 PPEF1O14829 653 aaPredicted RBP32.82■■■□□ 2.84
ZNF558-203ENST00000595786 IARSP41252 1262 aaKnown RBP32.82■■■□□ 2.84
ZNF558-203ENST00000595786 CCDC30Q5VVM6 783 aa32.82■■■□□ 2.84
ZNF558-203ENST00000595786 TMX4Q9H1E5 349 aaPredicted RBP32.81■■■□□ 2.84
ZNF558-203ENST00000595786 BBOX1O75936 387 aa32.8■■■□□ 2.84
ZNF558-203ENST00000595786 GOLGA2Q08379 1002 aa32.8■■■□□ 2.84
ZNF558-203ENST00000595786 DDNO94850 711 aaPredicted RBP32.79■■■□□ 2.84
ZNF558-203ENST00000595786 HCLS1P14317 486 aaPredicted RBP32.79■■■□□ 2.84
ZNF558-203ENST00000595786 RIC3Q7Z5B4 369 aa32.78■■■□□ 2.84
ZNF558-203ENST00000595786 L3MBTL3Q96JM7 780 aaPredicted RBP32.78■■■□□ 2.84
ZNF558-203ENST00000595786 ATP6V0A2Q9Y487 856 aa32.78■■■□□ 2.84
ZNF558-203ENST00000595786 FZD9O00144 591 aa32.77■■■□□ 2.84
ZNF558-203ENST00000595786 ABCC4O15439 1325 aa32.77■■■□□ 2.84
ZNF558-203ENST00000595786 IQCA1LA6NCM1 817 aa32.76■■■□□ 2.83
ZNF558-203ENST00000595786 DDX46Q7L014 1031 aaKnown RBP32.76■■■□□ 2.83
ZNF558-203ENST00000595786 JDP2Q8WYK2 163 aa32.76■■■□□ 2.83
ZNF558-203ENST00000595786 VPS33BQ9H267 617 aa32.76■■■□□ 2.83
ZNF558-203ENST00000595786 PHAXQ9H814 394 aaKnown RBP32.76■■■□□ 2.83
ZNF558-203ENST00000595786 ATP5J2-PTCD1G3V325 749 aa32.75■■■□□ 2.83
ZNF558-203ENST00000595786 DDX58O95786 925 aaKnown RBP32.74■■■□□ 2.83
ZNF558-203ENST00000595786 SP8Q8IXZ3 490 aa32.74■■■□□ 2.83
ZNF558-203ENST00000595786 TSPYL6Q8N831 410 aa32.74■■■□□ 2.83
ZNF558-203ENST00000595786 TMC4Q7Z404 712 aa32.73■■■□□ 2.83
ZNF558-203ENST00000595786 WDR63Q8IWG1 891 aa32.73■■■□□ 2.83
ZNF558-203ENST00000595786 TSR2Q969E8 191 aaKnown RBP32.73■■■□□ 2.83
ZNF558-203ENST00000595786 LAMB2P55268 1798 aa32.73■■■□□ 2.83
ZNF558-203ENST00000595786 GRAPQ13588 217 aa32.72■■■□□ 2.83
ZNF558-203ENST00000595786 SF3B3Q15393 1217 aaKnown RBP32.72■■■□□ 2.83
ZNF558-203ENST00000595786 GRAPLQ8TC17 118 aaPredicted RBP32.72■■■□□ 2.83
ZNF558-203ENST00000595786 FAM89AQ96GI7 184 aa32.72■■■□□ 2.83
ZNF558-203ENST00000595786 TCERG1O14776 1098 aaKnown RBP32.71■■■□□ 2.83
ZNF558-203ENST00000595786 HSP90B1P14625 803 aaKnown RBP32.71■■■□□ 2.83
ZNF558-203ENST00000595786 SCN4AP35499 1836 aa32.7■■■□□ 2.83
ZNF558-203ENST00000595786 CCDC191Q8NCU4 936 aa32.7■■■□□ 2.83
ZNF558-203ENST00000595786 SUPT20HQ8NEM7 779 aa32.7■■■□□ 2.83
ZNF558-203ENST00000595786 ZNF541Q9H0D2 1346 aa32.7■■■□□ 2.82
ZNF558-203ENST00000595786 GPC2Q8N158 579 aa32.69■■■□□ 2.82
ZNF558-203ENST00000595786 LARGE2Q8N3Y3 721 aa32.69■■■□□ 2.82
ZNF558-203ENST00000595786 DNAJC5GQ8N7S2 189 aa32.69■■■□□ 2.82
ZNF558-203ENST00000595786 ZBTB38Q8NAP3 1195 aaPredicted RBP32.69■■■□□ 2.82
ZNF558-203ENST00000595786 STK31Q9BXU1 1019 aa32.69■■■□□ 2.82
ZNF558-203ENST00000595786 RTFDC1Q9BY42 306 aaPredicted RBP32.69■■■□□ 2.82
ZNF558-203ENST00000595786 TWISTNBQ3B726 338 aaPredicted RBP32.68■■■□□ 2.82
ZNF558-203ENST00000595786 METTL22Q9BUU2 404 aaPredicted RBP32.68■■■□□ 2.82
ZNF558-203ENST00000595786 EIF6P56537 245 aaKnown RBP32.67■■■□□ 2.82
ZNF558-203ENST00000595786 DDX60Q8IY21 1712 aaKnown RBP32.66■■■□□ 2.82
ZNF558-203ENST00000595786 IRS4O14654 1257 aaPredicted RBP32.66■■■□□ 2.82
ZNF558-203ENST00000595786 MYD88Q99836 296 aa32.66■■■□□ 2.82
ZNF558-203ENST00000595786 TAF1DQ9H5J8 278 aaPredicted RBP32.66■■■□□ 2.82
ZNF558-203ENST00000595786 CHADLQ6NUI6 762 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms