RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MIER1Q8N108 512 aa14.19□□□□□ -0.14
SHKBP1-206ENST00000595523 ZNF622Q969S3 477 aaKnown RBP eCLIP14.19□□□□□ -0.142e-8■□□□□ 10.5
SHKBP1-206ENST00000595523 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-206ENST00000595523 EXOSC9Q06265 439 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-206ENST00000595523 CRY2Q49AN0 593 aa14.18□□□□□ -0.14
SHKBP1-206ENST00000595523 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
SHKBP1-206ENST00000595523 C3orf67Q6ZVT6 689 aa14.18□□□□□ -0.14
SHKBP1-206ENST00000595523 MASTLQ96GX5 879 aa14.18□□□□□ -0.14
SHKBP1-206ENST00000595523 VAMP4O75379 141 aa14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 GTF2E1P29083 439 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 PRELPP51888 382 aa14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 PRPF40BQ6NWY9 871 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 PPP1R42Q7Z4L9 355 aa14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 MYH3P11055 1940 aa14.17□□□□□ -0.14
SHKBP1-206ENST00000595523 ATP5J2-PTCD1G3V325 749 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 NPR1P16066 1061 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 RASSF7Q02833 373 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 G2E3Q7L622 706 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 C7orf43Q8WVR3 580 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 ZNF428Q96B54 188 aa14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 UTP14AQ9BVJ6 771 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-206ENST00000595523 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 COL4A1P02462 1669 aa14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 NFKBIEO00221 500 aa14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 C21orf2O43822 256 aa14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 MYH16Q9H6N6 1097 aa14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 SNED1Q8TER0 1413 aa14.15□□□□□ -0.14
SHKBP1-206ENST00000595523 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-206ENST00000595523 RIC3Q7Z5B4 369 aa14.14□□□□□ -0.15
SHKBP1-206ENST00000595523 STK31Q9BXU1 1019 aa14.14□□□□□ -0.15
SHKBP1-206ENST00000595523 CHMP4AQ9BY43 222 aa14.14□□□□□ -0.15
SHKBP1-206ENST00000595523 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
SHKBP1-206ENST00000595523 HOXA10P31260 410 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-206ENST00000595523 C9orf131Q5VYM1 1079 aa14.13□□□□□ -0.15
SHKBP1-206ENST00000595523 OLFM4Q6UX06 510 aa14.13□□□□□ -0.15
SHKBP1-206ENST00000595523 SLC51AQ86UW1 340 aa14.13□□□□□ -0.15
SHKBP1-206ENST00000595523 TRMT112Q9UI30 125 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-206ENST00000595523 SH3TC1Q8TE82 1336 aa14.13□□□□□ -0.15
SHKBP1-206ENST00000595523 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 PI4KAP2A4QPH2 592 aa14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 PI4KAP1Q8N8J0 262 aa14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 FAM89AQ96GI7 184 aa14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 CDCA7LQ96GN5 454 aa14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 MYD88Q99836 296 aa14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 MAP3K2Q9Y2U5 619 aa14.12□□□□□ -0.15
SHKBP1-206ENST00000595523 SLFN5Q08AF3 891 aa14.11□□□□□ -0.15
SHKBP1-206ENST00000595523 FLIIQ13045 1269 aa14.11□□□□□ -0.15
SHKBP1-206ENST00000595523 KSR2Q6VAB6 950 aa14.11□□□□□ -0.15
SHKBP1-206ENST00000595523 RNF181Q9P0P0 153 aa14.11□□□□□ -0.15
SHKBP1-206ENST00000595523 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
SHKBP1-206ENST00000595523 SPEF2Q9C093 1822 aa14.11□□□□□ -0.15
SHKBP1-206ENST00000595523 E9PSI1 815 aa14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 DDX58O95786 925 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 IGKV5-2P06315 115 aa14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 NLRP3Q96P20 1036 aa14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 CRAMP1Q96RY5 1269 aa14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 ABCC4O15439 1325 aa14.1□□□□□ -0.15
SHKBP1-206ENST00000595523 LMNB1P20700 586 aa14.09□□□□□ -0.15
SHKBP1-206ENST00000595523 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-206ENST00000595523 TRMT2AQ8IZ69 625 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-206ENST00000595523 CCDC191Q8NCU4 936 aa14.09□□□□□ -0.15
SHKBP1-206ENST00000595523 ZNF526Q8TF50 670 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-206ENST00000595523 LTBP1Q14766 1721 aa14.08□□□□□ -0.16
SHKBP1-206ENST00000595523 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
SHKBP1-206ENST00000595523 SOGA3Q5TF21 947 aa14.08□□□□□ -0.16
SHKBP1-206ENST00000595523 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-206ENST00000595523 RBM17Q96I25 401 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-206ENST00000595523 TAOK3Q9H2K8 898 aa14.08□□□□□ -0.16
SHKBP1-206ENST00000595523 COL4A5P29400 1685 aa14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 IRS4O14654 1257 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 PCCAP05165 728 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 CWF19L2Q2TBE0 894 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 JARID2Q92833 1246 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 CWC25Q9NXE8 425 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 DUOX1Q9NRD9 1551 aa14.07□□□□□ -0.16
SHKBP1-206ENST00000595523 NEURL1BA8MQ27 555 aa14.06□□□□□ -0.16
SHKBP1-206ENST00000595523 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-206ENST00000595523 DNAAF4Q8WXU2 420 aa14.06□□□□□ -0.16
SHKBP1-206ENST00000595523 GPBP1L1Q9HC44 474 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-206ENST00000595523 WDR90Q96KV7 1748 aa14.05□□□□□ -0.16
SHKBP1-206ENST00000595523 F6X3S4 739 aa14.05□□□□□ -0.16
SHKBP1-206ENST00000595523 FKBP4Q02790 459 aaKnown RBP eCLIP14.05□□□□□ -0.16
SHKBP1-206ENST00000595523 SF3B3Q15393 1217 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-206ENST00000595523 CDHR2Q9BYE9 1310 aa14.05□□□□□ -0.16
SHKBP1-206ENST00000595523 ZC3H4Q9UPT8 1303 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-206ENST00000595523 NEXNQ0ZGT2 675 aa14.04□□□□□ -0.16
SHKBP1-206ENST00000595523 GRAPQ13588 217 aa14.04□□□□□ -0.16
SHKBP1-206ENST00000595523 RTKN2Q8IZC4 609 aa14.04□□□□□ -0.16
SHKBP1-206ENST00000595523 GRAPLQ8TC17 118 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms