RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
TMEM38A-202ENST00000595452 ERFEQ4G0M1 354 aa17.52■□□□□ 0.4
TMEM38A-202ENST00000595452 ZNF784Q8NCA9 323 aaPredicted RBP17.52■□□□□ 0.4
TMEM38A-202ENST00000595452 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
TMEM38A-202ENST00000595452 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
TMEM38A-202ENST00000595452 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
TMEM38A-202ENST00000595452 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
TMEM38A-202ENST00000595452 PRPF40BQ6NWY9 871 aaKnown RBP17.51■□□□□ 0.39
TMEM38A-202ENST00000595452 NLRP10Q86W26 655 aa17.51■□□□□ 0.39
TMEM38A-202ENST00000595452 TSPYL6Q8N831 410 aa17.51■□□□□ 0.39
TMEM38A-202ENST00000595452 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
TMEM38A-202ENST00000595452 SLX4Q8IY92 1834 aa17.51■□□□□ 0.39
TMEM38A-202ENST00000595452 SBF1O95248 1867 aa17.5■□□□□ 0.39
TMEM38A-202ENST00000595452 NEXNQ0ZGT2 675 aa17.5■□□□□ 0.39
TMEM38A-202ENST00000595452 ADCY9O60503 1353 aa17.5■□□□□ 0.39
TMEM38A-202ENST00000595452 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
TMEM38A-202ENST00000595452 LAMB2P55268 1798 aa17.49■□□□□ 0.39
TMEM38A-202ENST00000595452 E9PSI1 815 aa17.49■□□□□ 0.39
TMEM38A-202ENST00000595452 C21orf2O43822 256 aa17.49■□□□□ 0.39
TMEM38A-202ENST00000595452 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
TMEM38A-202ENST00000595452 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
TMEM38A-202ENST00000595452 RBM17Q96I25 401 aaKnown RBP17.49■□□□□ 0.39
TMEM38A-202ENST00000595452 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
TMEM38A-202ENST00000595452 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 LMNB1P20700 586 aa17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 CCDC93Q567U6 631 aa17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 RNF181Q9P0P0 153 aa17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
TMEM38A-202ENST00000595452 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
TMEM38A-202ENST00000595452 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
TMEM38A-202ENST00000595452 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
TMEM38A-202ENST00000595452 C9orf131Q5VYM1 1079 aa17.47■□□□□ 0.39
TMEM38A-202ENST00000595452 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
TMEM38A-202ENST00000595452 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
TMEM38A-202ENST00000595452 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 GRIPAP1Q4V328 841 aa17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 SLC10A5Q5PT55 438 aa17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 CC2D2BQ6DHV5 1058 aa17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 CCDC191Q8NCU4 936 aa17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 MYD88Q99836 296 aa17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 DICER1Q9UPY3 1922 aaKnown RBP17.46■□□□□ 0.39
TMEM38A-202ENST00000595452 LTBP3Q9NS15 1303 aa17.46■□□□□ 0.38
TMEM38A-202ENST00000595452 DDX60Q8IY21 1712 aaKnown RBP17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 VAMP4O75379 141 aa17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 RASSF7Q02833 373 aa17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 FKBP5Q13451 457 aaPredicted RBP17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 RTKN2Q8IZC4 609 aa17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 METTL22Q9BUU2 404 aaPredicted RBP17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
TMEM38A-202ENST00000595452 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
TMEM38A-202ENST00000595452 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
TMEM38A-202ENST00000595452 FLIIQ13045 1269 aa17.44■□□□□ 0.38
TMEM38A-202ENST00000595452 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
TMEM38A-202ENST00000595452 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
TMEM38A-202ENST00000595452 PPEF1O14829 653 aaPredicted RBP17.43■□□□□ 0.38
TMEM38A-202ENST00000595452 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
TMEM38A-202ENST00000595452 ZNF526Q8TF50 670 aaPredicted RBP17.43■□□□□ 0.38
TMEM38A-202ENST00000595452 NFKBIEO00221 500 aa17.42■□□□□ 0.38
TMEM38A-202ENST00000595452 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
TMEM38A-202ENST00000595452 MIER1Q8N108 512 aa17.42■□□□□ 0.38
TMEM38A-202ENST00000595452 ZNF428Q96B54 188 aa17.42■□□□□ 0.38
TMEM38A-202ENST00000595452 FAM89AQ96GI7 184 aa17.42■□□□□ 0.38
TMEM38A-202ENST00000595452 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
TMEM38A-202ENST00000595452 MYH3P11055 1940 aa17.42■□□□□ 0.38
TMEM38A-202ENST00000595452 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
TMEM38A-202ENST00000595452 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
TMEM38A-202ENST00000595452 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
TMEM38A-202ENST00000595452 BBOX1O75936 387 aa17.4■□□□□ 0.38
TMEM38A-202ENST00000595452 PCCAP05165 728 aaPredicted RBP17.4■□□□□ 0.38
TMEM38A-202ENST00000595452 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
TMEM38A-202ENST00000595452 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
TMEM38A-202ENST00000595452 C7orf43Q8WVR3 580 aa17.39■□□□□ 0.37
TMEM38A-202ENST00000595452 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
TMEM38A-202ENST00000595452 ABCC4O15439 1325 aa17.39■□□□□ 0.37
TMEM38A-202ENST00000595452 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
TMEM38A-202ENST00000595452 GRAPQ13588 217 aa17.38■□□□□ 0.37
TMEM38A-202ENST00000595452 DPY19L2Q6NUT2 758 aa17.38■□□□□ 0.37
TMEM38A-202ENST00000595452 GRAPLQ8TC17 118 aaPredicted RBP17.38■□□□□ 0.37
TMEM38A-202ENST00000595452 PDE8AO60658 829 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 SF3B3Q15393 1217 aaKnown RBP17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 CCDC152Q4G0S7 254 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 G2E3Q7L622 706 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 PSMD1Q99460 953 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 CDHR2Q9BYE9 1310 aa17.37■□□□□ 0.37
TMEM38A-202ENST00000595452 NEURL1BA8MQ27 555 aa17.36■□□□□ 0.37
TMEM38A-202ENST00000595452 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
TMEM38A-202ENST00000595452 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
TMEM38A-202ENST00000595452 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms