RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 GOLGB1Q14789 3259 aaKnown RBP28.14■■■□□ 2.1
HOMER3-206ENST00000594439 UTP14AQ9BVJ6 771 aaKnown RBP28.14■■■□□ 2.1
HOMER3-206ENST00000594439 UTRNP46939 3433 aa28.14■■■□□ 2.1
HOMER3-206ENST00000594439 DDX58O95786 925 aaKnown RBP28.13■■■□□ 2.09
HOMER3-206ENST00000594439 TRMT2AQ8IZ69 625 aaKnown RBP28.13■■■□□ 2.09
HOMER3-206ENST00000594439 TTLL6Q8N841 843 aa28.13■■■□□ 2.09
HOMER3-206ENST00000594439 ZNF622Q969S3 477 aaKnown RBP eCLIP28.13■■■□□ 2.09
HOMER3-206ENST00000594439 ATP5J2-PTCD1G3V325 749 aa28.12■■■□□ 2.09
HOMER3-206ENST00000594439 STYK1Q6J9G0 422 aa28.12■■■□□ 2.09
HOMER3-206ENST00000594439 RNF123Q5XPI4 1314 aa28.12■■■□□ 2.09
HOMER3-206ENST00000594439 TRIM28Q13263 835 aaKnown RBP28.11■■■□□ 2.09
HOMER3-206ENST00000594439 MASTLQ96GX5 879 aa28.11■■■□□ 2.09
HOMER3-206ENST00000594439 ADCY9O60503 1353 aa28.11■■■□□ 2.09
HOMER3-206ENST00000594439 CACNA1SQ13698 1873 aa28.1■■■□□ 2.09
HOMER3-206ENST00000594439 YY1P25490 414 aa28.1■■■□□ 2.09
HOMER3-206ENST00000594439 KSR2Q6VAB6 950 aa28.1■■■□□ 2.09
HOMER3-206ENST00000594439 FLIIQ13045 1269 aa28.09■■■□□ 2.09
HOMER3-206ENST00000594439 SLC10A5Q5PT55 438 aa28.09■■■□□ 2.09
HOMER3-206ENST00000594439 METTL22Q9BUU2 404 aaPredicted RBP28.09■■■□□ 2.09
HOMER3-206ENST00000594439 TRMT112Q9UI30 125 aaKnown RBP28.09■■■□□ 2.09
HOMER3-206ENST00000594439 MAP3K2Q9Y2U5 619 aa28.09■■■□□ 2.09
HOMER3-206ENST00000594439 SLX4Q8IY92 1834 aa28.08■■■□□ 2.09
HOMER3-206ENST00000594439 PI4KAP2A4QPH2 592 aa28.08■■■□□ 2.09
HOMER3-206ENST00000594439 NPR1P16066 1061 aa28.08■■■□□ 2.09
HOMER3-206ENST00000594439 CRY2Q49AN0 593 aa28.08■■■□□ 2.09
HOMER3-206ENST00000594439 PI4KAP1Q8N8J0 262 aa28.08■■■□□ 2.09
HOMER3-206ENST00000594439 CNKSR1Q969H4 720 aa28.08■■■□□ 2.09
HOMER3-206ENST00000594439 MYD88Q99836 296 aa28.08■■■□□ 2.09
HOMER3-206ENST00000594439 ARHGAP27Q6ZUM4 889 aa28.07■■■□□ 2.08
HOMER3-206ENST00000594439 SYNE4Q8N205 404 aa28.07■■■□□ 2.08
HOMER3-206ENST00000594439 ZNF428Q96B54 188 aa28.07■■■□□ 2.08
HOMER3-206ENST00000594439 HNRNPUQ00839 825 aaKnown RBP eCLIP28.06■■■□□ 2.08
HOMER3-206ENST00000594439 C3orf67Q6ZVT6 689 aa28.06■■■□□ 2.08
HOMER3-206ENST00000594439 SH3TC1Q8TE82 1336 aa28.06■■■□□ 2.08
HOMER3-206ENST00000594439 LAMB2P55268 1798 aa28.06■■■□□ 2.08
HOMER3-206ENST00000594439 DDX60Q8IY21 1712 aaKnown RBP28.04■■■□□ 2.08
HOMER3-206ENST00000594439 FKBP5Q13451 457 aaPredicted RBP28.03■■■□□ 2.08
HOMER3-206ENST00000594439 PRPF40BQ6NWY9 871 aaKnown RBP28.03■■■□□ 2.08
HOMER3-206ENST00000594439 CCDC191Q8NCU4 936 aa28.03■■■□□ 2.08
HOMER3-206ENST00000594439 HCLS1P14317 486 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-206ENST00000594439 HOXA10P31260 410 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-206ENST00000594439 FAM89AQ96GI7 184 aa28.02■■■□□ 2.08
HOMER3-206ENST00000594439 NLRP3Q96P20 1036 aa28.02■■■□□ 2.08
HOMER3-206ENST00000594439 IGKV5-2P06315 115 aa28.01■■■□□ 2.07
HOMER3-206ENST00000594439 C21orf2O43822 256 aa28■■■□□ 2.07
HOMER3-206ENST00000594439 CWC25Q9NXE8 425 aaPredicted RBP28■■■□□ 2.07
HOMER3-206ENST00000594439 ZNF219Q9P2Y4 722 aaPredicted RBP28■■■□□ 2.07
HOMER3-206ENST00000594439 ALDH1B1P30837 517 aa27.99■■■□□ 2.07
HOMER3-206ENST00000594439 NEXNQ0ZGT2 675 aa27.99■■■□□ 2.07
HOMER3-206ENST00000594439 ZBTB38Q8NAP3 1195 aaPredicted RBP27.99■■■□□ 2.07
HOMER3-206ENST00000594439 C7orf43Q8WVR3 580 aa27.99■■■□□ 2.07
HOMER3-206ENST00000594439 DNAAF4Q8WXU2 420 aa27.99■■■□□ 2.07
HOMER3-206ENST00000594439 RPGRQ92834 1020 aaKnown RBP27.99■■■□□ 2.07
HOMER3-206ENST00000594439 SBF1O95248 1867 aa27.99■■■□□ 2.07
HOMER3-206ENST00000594439 FER1L6Q2WGJ9 1857 aa27.99■■■□□ 2.07
HOMER3-206ENST00000594439 MRPL50Q8N5N7 158 aaKnown RBP27.98■■■□□ 2.07
HOMER3-206ENST00000594439 PCCAP05165 728 aaPredicted RBP27.97■■■□□ 2.07
HOMER3-206ENST00000594439 RTL5Q5HYW3 569 aaPredicted RBP27.97■■■□□ 2.07
HOMER3-206ENST00000594439 SSH1Q8WYL5 1049 aa27.97■■■□□ 2.07
HOMER3-206ENST00000594439 CRAMP1Q96RY5 1269 aa27.97■■■□□ 2.07
HOMER3-206ENST00000594439 NEURL1BA8MQ27 555 aa27.96■■■□□ 2.07
HOMER3-206ENST00000594439 CWF19L2Q2TBE0 894 aaKnown RBP27.96■■■□□ 2.07
HOMER3-206ENST00000594439 RBM17Q96I25 401 aaKnown RBP27.96■■■□□ 2.07
HOMER3-206ENST00000594439 F6X3S4 739 aa27.95■■■□□ 2.06
HOMER3-206ENST00000594439 NFKBIEO00221 500 aa27.95■■■□□ 2.06
HOMER3-206ENST00000594439 IRS4O14654 1257 aaPredicted RBP27.95■■■□□ 2.06
HOMER3-206ENST00000594439 CT47B1P0C2W7 299 aaPredicted RBP27.95■■■□□ 2.06
HOMER3-206ENST00000594439 RASSF7Q02833 373 aa27.95■■■□□ 2.06
HOMER3-206ENST00000594439 ALDH1L2Q3SY69 923 aa27.94■■■□□ 2.06
HOMER3-206ENST00000594439 JARID2Q92833 1246 aaPredicted RBP27.94■■■□□ 2.06
HOMER3-206ENST00000594439 SOGA3Q5TF21 947 aa27.93■■■□□ 2.06
HOMER3-206ENST00000594439 LINS1Q8NG48 757 aa27.93■■■□□ 2.06
HOMER3-206ENST00000594439 ZBED9Q6R2W3 1325 aa27.92■■■□□ 2.06
HOMER3-206ENST00000594439 CCDC88AQ3V6T2 1871 aa27.92■■■□□ 2.06
HOMER3-206ENST00000594439 SF3B3Q15393 1217 aaKnown RBP27.92■■■□□ 2.06
HOMER3-206ENST00000594439 ABCC4O15439 1325 aa27.92■■■□□ 2.06
HOMER3-206ENST00000594439 CDHR2Q9BYE9 1310 aa27.92■■■□□ 2.06
HOMER3-206ENST00000594439 PRELPP51888 382 aa27.91■■■□□ 2.06
HOMER3-206ENST00000594439 C9orf131Q5VYM1 1079 aa27.91■■■□□ 2.06
HOMER3-206ENST00000594439 OLFM4Q6UX06 510 aa27.91■■■□□ 2.06
HOMER3-206ENST00000594439 BCL2L13Q9BXK5 485 aa27.91■■■□□ 2.06
HOMER3-206ENST00000594439 TAF1P21675 1872 aa27.91■■■□□ 2.06
HOMER3-206ENST00000594439 GCKRQ14397 625 aa27.9■■■□□ 2.06
HOMER3-206ENST00000594439 CCDC93Q567U6 631 aa27.9■■■□□ 2.06
HOMER3-206ENST00000594439 BEND3Q5T5X7 828 aa27.9■■■□□ 2.06
HOMER3-206ENST00000594439 ZNF784Q8NCA9 323 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-206ENST00000594439 H7C1W4 665 aa27.89■■■□□ 2.06
HOMER3-206ENST00000594439 HSP90B1P14625 803 aaKnown RBP27.89■■■□□ 2.06
HOMER3-206ENST00000594439 DDX46Q7L014 1031 aaKnown RBP27.89■■■□□ 2.06
HOMER3-206ENST00000594439 SNED1Q8TER0 1413 aa27.89■■■□□ 2.06
HOMER3-206ENST00000594439 LTBP3Q9NS15 1303 aa27.89■■■□□ 2.05
HOMER3-206ENST00000594439 SMC4Q9NTJ3 1288 aa27.88■■■□□ 2.05
HOMER3-206ENST00000594439 RNF181Q9P0P0 153 aa27.88■■■□□ 2.05
HOMER3-206ENST00000594439 PPEF1O14829 653 aaPredicted RBP27.87■■■□□ 2.05
HOMER3-206ENST00000594439 PDE8AO60658 829 aa27.87■■■□□ 2.05
HOMER3-206ENST00000594439 LMNB1P20700 586 aa27.87■■■□□ 2.05
HOMER3-206ENST00000594439 PTPRCP08575 1304 aa27.87■■■□□ 2.05
HOMER3-206ENST00000594439 GRAPQ13588 217 aa27.86■■■□□ 2.05
HOMER3-206ENST00000594439 SLC51AQ86UW1 340 aa27.86■■■□□ 2.05
HOMER3-206ENST00000594439 GRAPLQ8TC17 118 aaPredicted RBP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms