RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 TCIRG1Q13488 830 aa18.05■□□□□ 0.48
ARHGEF1-208ENST00000594417 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
ARHGEF1-208ENST00000594417 DBF4Q9UBU7 674 aaPredicted RBP18.05■□□□□ 0.48
ARHGEF1-208ENST00000594417 CEP350Q5VT06 3117 aa18.05■□□□□ 0.48
ARHGEF1-208ENST00000594417 ANKRD31Q8N7Z5 1873 aa18.05■□□□□ 0.48
ARHGEF1-208ENST00000594417 SLC10A5Q5PT55 438 aa18.04■□□□□ 0.48
ARHGEF1-208ENST00000594417 CRAMP1Q96RY5 1269 aa18.04■□□□□ 0.48
ARHGEF1-208ENST00000594417 MBIPQ9NS73 344 aa18.04■□□□□ 0.48
ARHGEF1-208ENST00000594417 TRMT112Q9UI30 125 aaKnown RBP18.04■□□□□ 0.48
ARHGEF1-208ENST00000594417 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
ARHGEF1-208ENST00000594417 POTECB2RU33 542 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 GNAI1P63096 354 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 GRIPAP1Q4V328 841 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 ANKRD13DQ6ZTN6 518 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 NLRP10Q86W26 655 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 DLEC1Q9Y238 1755 aa18.03■□□□□ 0.48
ARHGEF1-208ENST00000594417 IQCA1LA6NCM1 817 aa18.02■□□□□ 0.48
ARHGEF1-208ENST00000594417 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
ARHGEF1-208ENST00000594417 IARSP41252 1262 aaKnown RBP18.02■□□□□ 0.48
ARHGEF1-208ENST00000594417 IFT57Q9NWB7 429 aa18.02■□□□□ 0.48
ARHGEF1-208ENST00000594417 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.47
ARHGEF1-208ENST00000594417 RNF123Q5XPI4 1314 aa18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 ELL2O00472 640 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 HCLS1P14317 486 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 HTRA3P83110 453 aa18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 C3orf67Q6ZVT6 689 aa18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 DNAJC5GQ8N7S2 189 aa18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 PSMD1Q99460 953 aa18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 COL11A2P13942 1736 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF1-208ENST00000594417 ZNF853P0CG23 659 aa18■□□□□ 0.47
ARHGEF1-208ENST00000594417 SLX4Q8IY92 1834 aa18■□□□□ 0.47
ARHGEF1-208ENST00000594417 SH3TC1Q8TE82 1336 aa17.99■□□□□ 0.47
ARHGEF1-208ENST00000594417 RIC1Q4ADV7 1423 aa17.99■□□□□ 0.47
ARHGEF1-208ENST00000594417 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
ARHGEF1-208ENST00000594417 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
ARHGEF1-208ENST00000594417 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 ATP5J2-PTCD1G3V325 749 aa17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 ANP32CO43423 234 aa17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 BBOX1O75936 387 aa17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 EIF6P56537 245 aaKnown RBP17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 DDX46Q7L014 1031 aaKnown RBP17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 LARGE2Q8N3Y3 721 aa17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 SBF1O95248 1867 aa17.98■□□□□ 0.47
ARHGEF1-208ENST00000594417 FZD9O00144 591 aa17.97■□□□□ 0.47
ARHGEF1-208ENST00000594417 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
ARHGEF1-208ENST00000594417 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
ARHGEF1-208ENST00000594417 L3MBTL3Q96JM7 780 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF1-208ENST00000594417 ATP6V0A2Q9Y487 856 aa17.97■□□□□ 0.47
ARHGEF1-208ENST00000594417 ZNF541Q9H0D2 1346 aa17.97■□□□□ 0.47
ARHGEF1-208ENST00000594417 KLRG1Q96E93 195 aa17.96■□□□□ 0.47
ARHGEF1-208ENST00000594417 TAF1DQ9H5J8 278 aaPredicted RBP17.96■□□□□ 0.47
ARHGEF1-208ENST00000594417 HACL1Q9UJ83 578 aa17.96■□□□□ 0.47
ARHGEF1-208ENST00000594417 CLEC11AQ9Y240 323 aa17.96■□□□□ 0.47
ARHGEF1-208ENST00000594417 GJA3Q9Y6H8 435 aa17.96■□□□□ 0.47
ARHGEF1-208ENST00000594417 EAPPQ56P03 285 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 GPC2Q8N158 579 aa17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 ISCA1Q9BUE6 129 aa17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 TNRC6CQ9HCJ0 1690 aaKnown RBP17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 ABCC4O15439 1325 aa17.95■□□□□ 0.46
ARHGEF1-208ENST00000594417 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 DPP8Q6V1X1 898 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 LDHDQ86WU2 507 aa17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 NIM1KQ8IY84 436 aa17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
ARHGEF1-208ENST00000594417 POTEIP0CG38 1075 aa17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 POTEJP0CG39 1038 aa17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 EPHX2P34913 555 aa17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 GRAPQ13588 217 aa17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 MPNDQ8N594 471 aa17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 GRAPLQ8TC17 118 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 PHAXQ9H814 394 aaKnown RBP17.93■□□□□ 0.46
ARHGEF1-208ENST00000594417 FER1L6Q2WGJ9 1857 aa17.92■□□□□ 0.46
ARHGEF1-208ENST00000594417 DDX58O95786 925 aaKnown RBP17.92■□□□□ 0.46
ARHGEF1-208ENST00000594417 LMOD1P29536 600 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF1-208ENST00000594417 TRIM28Q13263 835 aaKnown RBP17.92■□□□□ 0.46
ARHGEF1-208ENST00000594417 SLC51AQ86UW1 340 aa17.92■□□□□ 0.46
ARHGEF1-208ENST00000594417 HSP90B1P14625 803 aaKnown RBP17.91■□□□□ 0.46
ARHGEF1-208ENST00000594417 AOC3Q16853 763 aa17.91■□□□□ 0.46
ARHGEF1-208ENST00000594417 TMC4Q7Z404 712 aa17.91■□□□□ 0.46
ARHGEF1-208ENST00000594417 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
ARHGEF1-208ENST00000594417 MYD88Q99836 296 aa17.91■□□□□ 0.46
ARHGEF1-208ENST00000594417 NUP98P52948 1817 aa17.91■□□□□ 0.46
ARHGEF1-208ENST00000594417 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
ARHGEF1-208ENST00000594417 WDR90Q96KV7 1748 aa17.9■□□□□ 0.46
ARHGEF1-208ENST00000594417 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF1-208ENST00000594417 CCDC27Q2M243 656 aa17.9■□□□□ 0.46
ARHGEF1-208ENST00000594417 WWC1Q8IX03 1113 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms