RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 RIC3Q7Z5B4 369 aa22.37■■□□□ 1.17
IRF3-208ENST00000594387 WDR63Q8IWG1 891 aa22.37■■□□□ 1.17
IRF3-208ENST00000594387 C8orf58Q8NAV2 365 aa22.37■■□□□ 1.17
IRF3-208ENST00000594387 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
IRF3-208ENST00000594387 NLRP3Q96P20 1036 aa22.37■■□□□ 1.17
IRF3-208ENST00000594387 STK31Q9BXU1 1019 aa22.37■■□□□ 1.17
IRF3-208ENST00000594387 RASSF7Q02833 373 aa22.36■■□□□ 1.17
IRF3-208ENST00000594387 TRMT112Q9UI30 125 aaKnown RBP22.36■■□□□ 1.17
IRF3-208ENST00000594387 NTSR2O95665 410 aa22.35■■□□□ 1.17
IRF3-208ENST00000594387 DDX58O95786 925 aaKnown RBP22.35■■□□□ 1.17
IRF3-208ENST00000594387 RBM17Q96I25 401 aaKnown RBP22.35■■□□□ 1.17
IRF3-208ENST00000594387 TMX4Q9H1E5 349 aaPredicted RBP22.35■■□□□ 1.17
IRF3-208ENST00000594387 KDM2BQ8NHM5 1336 aa22.34■■□□□ 1.17
IRF3-208ENST00000594387 TNRC6CQ9HCJ0 1690 aaKnown RBP22.34■■□□□ 1.17
IRF3-208ENST00000594387 NLRP10Q86W26 655 aa22.34■■□□□ 1.17
IRF3-208ENST00000594387 TAOK3Q9H2K8 898 aa22.34■■□□□ 1.17
IRF3-208ENST00000594387 UTRNP46939 3433 aa22.34■■□□□ 1.17
IRF3-208ENST00000594387 ZC3H4Q9UPT8 1303 aaKnown RBP22.33■■□□□ 1.17
IRF3-208ENST00000594387 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
IRF3-208ENST00000594387 C1QTNF8P60827 252 aa22.33■■□□□ 1.17
IRF3-208ENST00000594387 TWISTNBQ3B726 338 aaPredicted RBP22.33■■□□□ 1.17
IRF3-208ENST00000594387 CCDC93Q567U6 631 aa22.33■■□□□ 1.17
IRF3-208ENST00000594387 ABCC12Q96J65 1359 aa22.33■■□□□ 1.17
IRF3-208ENST00000594387 TIAM2Q8IVF5 1701 aa22.32■■□□□ 1.16
IRF3-208ENST00000594387 CRY2Q49AN0 593 aa22.32■■□□□ 1.16
IRF3-208ENST00000594387 RTKN2Q8IZC4 609 aa22.32■■□□□ 1.16
IRF3-208ENST00000594387 GOLGB1Q14789 3259 aaKnown RBP22.32■■□□□ 1.16
IRF3-208ENST00000594387 SH3TC1Q8TE82 1336 aa22.31■■□□□ 1.16
IRF3-208ENST00000594387 SLC10A5Q5PT55 438 aa22.31■■□□□ 1.16
IRF3-208ENST00000594387 MYH16Q9H6N6 1097 aa22.31■■□□□ 1.16
IRF3-208ENST00000594387 PHAXQ9H814 394 aaKnown RBP22.31■■□□□ 1.16
IRF3-208ENST00000594387 LAMB2P55268 1798 aa22.3■■□□□ 1.16
IRF3-208ENST00000594387 NFKBIEO00221 500 aa22.3■■□□□ 1.16
IRF3-208ENST00000594387 CC2D2BQ6DHV5 1058 aa22.3■■□□□ 1.16
IRF3-208ENST00000594387 DPY19L2Q6NUT2 758 aa22.3■■□□□ 1.16
IRF3-208ENST00000594387 TSPYL6Q8N831 410 aa22.3■■□□□ 1.16
IRF3-208ENST00000594387 LTBP3Q9NS15 1303 aa22.3■■□□□ 1.16
IRF3-208ENST00000594387 ATP5J2-PTCD1G3V325 749 aa22.29■■□□□ 1.16
IRF3-208ENST00000594387 HOXA10P31260 410 aaPredicted RBP22.29■■□□□ 1.16
IRF3-208ENST00000594387 GRIPAP1Q4V328 841 aa22.29■■□□□ 1.16
IRF3-208ENST00000594387 C16orf71Q8IYS4 520 aaPredicted RBP22.29■■□□□ 1.16
IRF3-208ENST00000594387 CRAMP1Q96RY5 1269 aa22.29■■□□□ 1.16
IRF3-208ENST00000594387 HSP90B1P14625 803 aaKnown RBP22.28■■□□□ 1.16
IRF3-208ENST00000594387 ISCA1Q9BUE6 129 aa22.28■■□□□ 1.16
IRF3-208ENST00000594387 FANCIQ9NVI1 1328 aa22.28■■□□□ 1.16
IRF3-208ENST00000594387 HCLS1P14317 486 aaPredicted RBP22.26■■□□□ 1.15
IRF3-208ENST00000594387 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
IRF3-208ENST00000594387 NEXNQ0ZGT2 675 aa22.26■■□□□ 1.15
IRF3-208ENST00000594387 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
IRF3-208ENST00000594387 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
IRF3-208ENST00000594387 MYD88Q99836 296 aa22.26■■□□□ 1.15
IRF3-208ENST00000594387 SLC4A2P04920 1241 aa22.25■■□□□ 1.15
IRF3-208ENST00000594387 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
IRF3-208ENST00000594387 DDX60Q8IY21 1712 aaKnown RBP22.24■■□□□ 1.15
IRF3-208ENST00000594387 GLTPD2A6NH11 291 aa22.24■■□□□ 1.15
IRF3-208ENST00000594387 CCER2I3L3R5 266 aa22.24■■□□□ 1.15
IRF3-208ENST00000594387 TCERG1O14776 1098 aaKnown RBP22.24■■□□□ 1.15
IRF3-208ENST00000594387 PPEF1O14829 653 aaPredicted RBP22.24■■□□□ 1.15
IRF3-208ENST00000594387 KSR2Q6VAB6 950 aa22.24■■□□□ 1.15
IRF3-208ENST00000594387 FAM89AQ96GI7 184 aa22.24■■□□□ 1.15
IRF3-208ENST00000594387 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
IRF3-208ENST00000594387 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
IRF3-208ENST00000594387 ZNF428Q96B54 188 aa22.23■■□□□ 1.15
IRF3-208ENST00000594387 METTL22Q9BUU2 404 aaPredicted RBP22.23■■□□□ 1.15
IRF3-208ENST00000594387 RRAGCQ9HB90 399 aa22.23■■□□□ 1.15
IRF3-208ENST00000594387 NMRK2Q9NPI5 230 aa22.23■■□□□ 1.15
IRF3-208ENST00000594387 MAP3K2Q9Y2U5 619 aa22.23■■□□□ 1.15
IRF3-208ENST00000594387 KIF3CO14782 793 aa22.22■■□□□ 1.15
IRF3-208ENST00000594387 BBOX1O75936 387 aa22.22■■□□□ 1.15
IRF3-208ENST00000594387 SYNE4Q8N205 404 aa22.22■■□□□ 1.15
IRF3-208ENST00000594387 CWC25Q9NXE8 425 aaPredicted RBP22.22■■□□□ 1.15
IRF3-208ENST00000594387 TAF1P21675 1872 aa22.22■■□□□ 1.15
IRF3-208ENST00000594387 TOMM70O94826 608 aa22.21■■□□□ 1.15
IRF3-208ENST00000594387 PRELPP51888 382 aa22.21■■□□□ 1.15
IRF3-208ENST00000594387 RTL5Q5HYW3 569 aaPredicted RBP22.21■■□□□ 1.15
IRF3-208ENST00000594387 C3orf67Q6ZVT6 689 aa22.21■■□□□ 1.15
IRF3-208ENST00000594387 ZBTB38Q8NAP3 1195 aaPredicted RBP22.21■■□□□ 1.15
IRF3-208ENST00000594387 PI4KAP2A4QPH2 592 aa22.2■■□□□ 1.14
IRF3-208ENST00000594387 IRS4O14654 1257 aaPredicted RBP22.2■■□□□ 1.14
IRF3-208ENST00000594387 VAMP4O75379 141 aa22.2■■□□□ 1.14
IRF3-208ENST00000594387 OLFM4Q6UX06 510 aa22.2■■□□□ 1.14
IRF3-208ENST00000594387 PI4KAP1Q8N8J0 262 aa22.2■■□□□ 1.14
IRF3-208ENST00000594387 JDP2Q8WYK2 163 aa22.2■■□□□ 1.14
IRF3-208ENST00000594387 PSMD1Q99460 953 aa22.2■■□□□ 1.14
IRF3-208ENST00000594387 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
IRF3-208ENST00000594387 IARSP41252 1262 aaKnown RBP22.19■■□□□ 1.14
IRF3-208ENST00000594387 ZNF277Q9NRM2 450 aaPredicted RBP22.19■■□□□ 1.14
IRF3-208ENST00000594387 ABCC4O15439 1325 aa22.19■■□□□ 1.14
IRF3-208ENST00000594387 MYH3P11055 1940 aa22.19■■□□□ 1.14
IRF3-208ENST00000594387 FKBP5Q13451 457 aaPredicted RBP22.18■■□□□ 1.14
IRF3-208ENST00000594387 TMC4Q7Z404 712 aa22.18■■□□□ 1.14
IRF3-208ENST00000594387 SUPT20HQ8NEM7 779 aa22.18■■□□□ 1.14
IRF3-208ENST00000594387 ATP6V0A2Q9Y487 856 aa22.18■■□□□ 1.14
IRF3-208ENST00000594387 PCCAP05165 728 aaPredicted RBP22.17■■□□□ 1.14
IRF3-208ENST00000594387 FLIIQ13045 1269 aa22.17■■□□□ 1.14
IRF3-208ENST00000594387 GRAPQ13588 217 aa22.17■■□□□ 1.14
IRF3-208ENST00000594387 SP8Q8IXZ3 490 aa22.17■■□□□ 1.14
IRF3-208ENST00000594387 GRAPLQ8TC17 118 aaPredicted RBP22.17■■□□□ 1.14
IRF3-208ENST00000594387 SF3B3Q15393 1217 aaKnown RBP22.16■■□□□ 1.14
IRF3-208ENST00000594387 G2E3Q7L622 706 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms