RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 CST9Q5W186 159 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 MCOLN1Q9GZU1 580 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 CASP8AP2Q9UKL3 1982 aa11.44□□□□□ -0.58
SMG9-202ENST00000594081 U2SURPO15042 1029 aaKnown RBP11.43□□□□□ -0.58
SMG9-202ENST00000594081 MAP2K2P36507 400 aa11.43□□□□□ -0.58
SMG9-202ENST00000594081 CRY2Q49AN0 593 aa11.43□□□□□ -0.58
SMG9-202ENST00000594081 NUP98P52948 1817 aa11.43□□□□□ -0.58
SMG9-202ENST00000594081 NBPF26B4DH59 902 aa11.42□□□□□ -0.58
SMG9-202ENST00000594081 CA12O43570 354 aa11.42□□□□□ -0.58
SMG9-202ENST00000594081 NBPF10Q6P3W6 841 aaKnown RBP11.42□□□□□ -0.58
SMG9-202ENST00000594081 USP50Q70EL3 339 aaPredicted RBP11.42□□□□□ -0.58
SMG9-202ENST00000594081 SAPCD2Q86UD0 394 aa11.42□□□□□ -0.58
SMG9-202ENST00000594081 SLC51AQ86UW1 340 aa11.42□□□□□ -0.58
SMG9-202ENST00000594081 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
SMG9-202ENST00000594081 NBPF15Q8N660 670 aa11.42□□□□□ -0.58
SMG9-202ENST00000594081 PDE4DIPQ5VU43 2346 aa11.42□□□□□ -0.58
SMG9-202ENST00000594081 SNRPA1P09661 255 aaKnown RBP11.41□□□□□ -0.58
SMG9-202ENST00000594081 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
SMG9-202ENST00000594081 BRPF1P55201 1214 aaPredicted RBP11.41□□□□□ -0.58
SMG9-202ENST00000594081 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
SMG9-202ENST00000594081 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
SMG9-202ENST00000594081 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
SMG9-202ENST00000594081 TNRC18O15417 2968 aaPredicted RBP11.4□□□□□ -0.58
SMG9-202ENST00000594081 CELF2O95319 508 aaKnown RBP11.4□□□□□ -0.58
SMG9-202ENST00000594081 DGKZQ13574 1117 aa11.4□□□□□ -0.58
SMG9-202ENST00000594081 HLFQ16534 295 aa11.4□□□□□ -0.58
SMG9-202ENST00000594081 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
SMG9-202ENST00000594081 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
SMG9-202ENST00000594081 RPGRQ92834 1020 aaKnown RBP11.4□□□□□ -0.58
SMG9-202ENST00000594081 ADARB2Q9NS39 739 aaKnown RBP11.4□□□□□ -0.58
SMG9-202ENST00000594081 KDM3BQ7LBC6 1761 aa11.4□□□□□ -0.58
SMG9-202ENST00000594081 KIF7Q2M1P5 1343 aa11.39□□□□□ -0.59
SMG9-202ENST00000594081 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
SMG9-202ENST00000594081 PRKAR2BP31323 418 aa11.39□□□□□ -0.59
SMG9-202ENST00000594081 HHIPL1Q96JK4 782 aa11.39□□□□□ -0.59
SMG9-202ENST00000594081 NYXQ9GZU5 481 aa11.39□□□□□ -0.59
SMG9-202ENST00000594081 GPRC5DQ9NZD1 345 aa11.39□□□□□ -0.59
SMG9-202ENST00000594081 NPC1L1Q9UHC9 1359 aa11.39□□□□□ -0.59
SMG9-202ENST00000594081 CLSPNQ9HAW4 1339 aa11.38□□□□□ -0.59
SMG9-202ENST00000594081 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
SMG9-202ENST00000594081 AOC3Q16853 763 aa11.38□□□□□ -0.59
SMG9-202ENST00000594081 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
SMG9-202ENST00000594081 CIAPIN1Q6FI81 312 aa11.38□□□□□ -0.59
SMG9-202ENST00000594081 PHACTR3Q96KR7 559 aa11.38□□□□□ -0.59
SMG9-202ENST00000594081 GLIS2Q9BZE0 524 aaPredicted RBP11.38□□□□□ -0.59
SMG9-202ENST00000594081 ZNF408Q9H9D4 720 aa11.38□□□□□ -0.59
SMG9-202ENST00000594081 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
SMG9-202ENST00000594081 LAMB2P55268 1798 aa11.37□□□□□ -0.59
SMG9-202ENST00000594081 HOXA10P31260 410 aaPredicted RBP11.37□□□□□ -0.59
SMG9-202ENST00000594081 MCM10Q7L590 875 aa11.37□□□□□ -0.59
SMG9-202ENST00000594081 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
SMG9-202ENST00000594081 CDHR2Q9BYE9 1310 aa11.36□□□□□ -0.59
SMG9-202ENST00000594081 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
SMG9-202ENST00000594081 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
SMG9-202ENST00000594081 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
SMG9-202ENST00000594081 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
SMG9-202ENST00000594081 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 GPTP24298 496 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 GMPSP49915 693 aaPredicted RBP11.35□□□□□ -0.59
SMG9-202ENST00000594081 SOX10P56693 466 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 CXCL9Q07325 125 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 NOGQ13253 232 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 RBM17Q96I25 401 aaKnown RBP11.35□□□□□ -0.59
SMG9-202ENST00000594081 DUOX1Q9NRD9 1551 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 DLG5Q8TDM6 1919 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 LRRC37AA6NMS7 1700 aa11.35□□□□□ -0.59
SMG9-202ENST00000594081 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 NTSR2O95665 410 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 CNGB1Q14028 1251 aaPredicted RBP11.34□□□□□ -0.59
SMG9-202ENST00000594081 DCTN1Q14203 1278 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 NGEFQ8N5V2 710 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 TRPM4Q8TD43 1214 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 PGAP2Q9UHJ9 254 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 ZNRF3Q9ULT6 936 aa11.34□□□□□ -0.59
SMG9-202ENST00000594081 DDX60Q8IY21 1712 aaKnown RBP11.33□□□□□ -0.6
SMG9-202ENST00000594081 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
SMG9-202ENST00000594081 TTLL7Q6ZT98 887 aa11.33□□□□□ -0.6
SMG9-202ENST00000594081 CDC37L1Q7L3B6 337 aa11.33□□□□□ -0.6
SMG9-202ENST00000594081 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
SMG9-202ENST00000594081 VPS33BQ9H267 617 aa11.33□□□□□ -0.6
SMG9-202ENST00000594081 ZBTB3Q9H5J0 574 aa11.33□□□□□ -0.6
SMG9-202ENST00000594081 AKAP11Q9UKA4 1901 aa11.33□□□□□ -0.6
SMG9-202ENST00000594081 ABCC4O15439 1325 aa11.33□□□□□ -0.6
SMG9-202ENST00000594081 HIRAP54198 1017 aaPredicted RBP11.32□□□□□ -0.6
SMG9-202ENST00000594081 HUNKP57058 714 aa11.32□□□□□ -0.6
SMG9-202ENST00000594081 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
SMG9-202ENST00000594081 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
SMG9-202ENST00000594081 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
SMG9-202ENST00000594081 BCL2L13Q9BXK5 485 aa11.32□□□□□ -0.6
SMG9-202ENST00000594081 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
SMG9-202ENST00000594081 TMX4Q9H1E5 349 aaPredicted RBP11.32□□□□□ -0.6
SMG9-202ENST00000594081 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
SMG9-202ENST00000594081 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
SMG9-202ENST00000594081 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
SMG9-202ENST00000594081 FAM155AB1AL88 458 aaPredicted RBP11.31□□□□□ -0.6
SMG9-202ENST00000594081 RAD17O75943 681 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms