RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 RIC3Q7Z5B4 369 aa25.83■■□□□ 1.73
COPE-204ENST00000593827 NLRP10Q86W26 655 aa25.83■■□□□ 1.73
COPE-204ENST00000593827 ZNF526Q8TF50 670 aaPredicted RBP25.83■■□□□ 1.73
COPE-204ENST00000593827 ZNF219Q9P2Y4 722 aaPredicted RBP25.83■■□□□ 1.73
COPE-204ENST00000593827 NUP98P52948 1817 aa25.83■■□□□ 1.73
COPE-204ENST00000593827 ABCC12Q96J65 1359 aa25.82■■□□□ 1.72
COPE-204ENST00000593827 TWISTNBQ3B726 338 aaPredicted RBP25.82■■□□□ 1.72
COPE-204ENST00000593827 CCDC93Q567U6 631 aa25.82■■□□□ 1.72
COPE-204ENST00000593827 RBM17Q96I25 401 aaKnown RBP25.82■■□□□ 1.72
COPE-204ENST00000593827 MYH16Q9H6N6 1097 aa25.82■■□□□ 1.72
COPE-204ENST00000593827 TRMT112Q9UI30 125 aaKnown RBP25.82■■□□□ 1.72
COPE-204ENST00000593827 RASSF7Q02833 373 aa25.81■■□□□ 1.72
COPE-204ENST00000593827 SLC10A5Q5PT55 438 aa25.81■■□□□ 1.72
COPE-204ENST00000593827 TAOK3Q9H2K8 898 aa25.81■■□□□ 1.72
COPE-204ENST00000593827 LTBP3Q9NS15 1303 aa25.81■■□□□ 1.72
COPE-204ENST00000593827 HOXA10P31260 410 aaPredicted RBP25.8■■□□□ 1.72
COPE-204ENST00000593827 GRIPAP1Q4V328 841 aa25.8■■□□□ 1.72
COPE-204ENST00000593827 RTKN2Q8IZC4 609 aa25.8■■□□□ 1.72
COPE-204ENST00000593827 TMX4Q9H1E5 349 aaPredicted RBP25.8■■□□□ 1.72
COPE-204ENST00000593827 KDM2BQ8NHM5 1336 aa25.8■■□□□ 1.72
COPE-204ENST00000593827 SH3TC1Q8TE82 1336 aa25.8■■□□□ 1.72
COPE-204ENST00000593827 NFKBIEO00221 500 aa25.79■■□□□ 1.72
COPE-204ENST00000593827 HSP90B1P14625 803 aaKnown RBP25.79■■□□□ 1.72
COPE-204ENST00000593827 CC2D2BQ6DHV5 1058 aa25.79■■□□□ 1.72
COPE-204ENST00000593827 COL11A2P13942 1736 aaPredicted RBP25.78■■□□□ 1.72
COPE-204ENST00000593827 CCER2I3L3R5 266 aa25.78■■□□□ 1.72
COPE-204ENST00000593827 TRIM28Q13263 835 aaKnown RBP25.78■■□□□ 1.72
COPE-204ENST00000593827 TSPYL6Q8N831 410 aa25.78■■□□□ 1.72
COPE-204ENST00000593827 CRAMP1Q96RY5 1269 aa25.78■■□□□ 1.72
COPE-204ENST00000593827 FANCIQ9NVI1 1328 aa25.78■■□□□ 1.72
COPE-204ENST00000593827 ISCA1Q9BUE6 129 aa25.77■■□□□ 1.72
COPE-204ENST00000593827 C7orf43Q8WVR3 580 aa25.76■■□□□ 1.71
COPE-204ENST00000593827 PHAXQ9H814 394 aaKnown RBP25.76■■□□□ 1.71
COPE-204ENST00000593827 ATP5J2-PTCD1G3V325 749 aa25.73■■□□□ 1.71
COPE-204ENST00000593827 FKBP4Q02790 459 aaKnown RBP eCLIP25.73■■□□□ 1.712e-7■■■■□ 22.6
COPE-204ENST00000593827 DPY19L2Q6NUT2 758 aa25.73■■□□□ 1.71
COPE-204ENST00000593827 NEXNQ0ZGT2 675 aa25.72■■□□□ 1.71
COPE-204ENST00000593827 CCDC191Q8NCU4 936 aa25.72■■□□□ 1.71
COPE-204ENST00000593827 SLC4A2P04920 1241 aa25.71■■□□□ 1.71
COPE-204ENST00000593827 HCLS1P14317 486 aaPredicted RBP25.71■■□□□ 1.71
COPE-204ENST00000593827 KSR2Q6VAB6 950 aa25.71■■□□□ 1.71
COPE-204ENST00000593827 DDX46Q7L014 1031 aaKnown RBP25.71■■□□□ 1.71
COPE-204ENST00000593827 METTL22Q9BUU2 404 aaPredicted RBP25.71■■□□□ 1.71
COPE-204ENST00000593827 PPEF1O14829 653 aaPredicted RBP25.7■■□□□ 1.7
COPE-204ENST00000593827 BBOX1O75936 387 aa25.7■■□□□ 1.7
COPE-204ENST00000593827 C16orf71Q8IYS4 520 aaPredicted RBP25.7■■□□□ 1.7
COPE-204ENST00000593827 MYD88Q99836 296 aa25.7■■□□□ 1.7
COPE-204ENST00000593827 SLX4Q8IY92 1834 aa25.7■■□□□ 1.7
COPE-204ENST00000593827 ARFGEF2Q9Y6D5 1785 aa25.69■■□□□ 1.7
COPE-204ENST00000593827 GLTPD2A6NH11 291 aa25.69■■□□□ 1.7
COPE-204ENST00000593827 EXOSC9Q06265 439 aaKnown RBP25.69■■□□□ 1.7
COPE-204ENST00000593827 ZBTB38Q8NAP3 1195 aaPredicted RBP25.69■■□□□ 1.7
COPE-204ENST00000593827 CWC25Q9NXE8 425 aaPredicted RBP25.69■■□□□ 1.7
COPE-204ENST00000593827 MAP3K2Q9Y2U5 619 aa25.69■■□□□ 1.7
COPE-204ENST00000593827 ANKRD36CQ5JPF3 1778 aa25.69■■□□□ 1.7
COPE-204ENST00000593827 VAMP4O75379 141 aa25.68■■□□□ 1.7
COPE-204ENST00000593827 TMC4Q7Z404 712 aa25.68■■□□□ 1.7
COPE-204ENST00000593827 FAM89AQ96GI7 184 aa25.68■■□□□ 1.7
COPE-204ENST00000593827 PSMD1Q99460 953 aa25.68■■□□□ 1.7
COPE-204ENST00000593827 TNRC6CQ9HCJ0 1690 aaKnown RBP25.68■■□□□ 1.7
COPE-204ENST00000593827 PI4KAP2A4QPH2 592 aa25.67■■□□□ 1.7
COPE-204ENST00000593827 KIF3CO14782 793 aa25.67■■□□□ 1.7
COPE-204ENST00000593827 C3orf67Q6ZVT6 689 aa25.67■■□□□ 1.7
COPE-204ENST00000593827 PI4KAP1Q8N8J0 262 aa25.67■■□□□ 1.7
COPE-204ENST00000593827 IRS4O14654 1257 aaPredicted RBP25.66■■□□□ 1.7
COPE-204ENST00000593827 PRELPP51888 382 aa25.66■■□□□ 1.7
COPE-204ENST00000593827 E9PSI1 815 aa25.65■■□□□ 1.7
COPE-204ENST00000593827 TCERG1O14776 1098 aaKnown RBP25.65■■□□□ 1.7
COPE-204ENST00000593827 TOMM70O94826 608 aa25.65■■□□□ 1.7
COPE-204ENST00000593827 PCCAP05165 728 aaPredicted RBP25.65■■□□□ 1.7
COPE-204ENST00000593827 FLIIQ13045 1269 aa25.65■■□□□ 1.7
COPE-204ENST00000593827 SF3B3Q15393 1217 aaKnown RBP25.65■■□□□ 1.7
COPE-204ENST00000593827 SYNE4Q8N205 404 aa25.65■■□□□ 1.7
COPE-204ENST00000593827 NMRK2Q9NPI5 230 aa25.65■■□□□ 1.7
COPE-204ENST00000593827 ATP6V0A2Q9Y487 856 aa25.65■■□□□ 1.7
COPE-204ENST00000593827 CEP350Q5VT06 3117 aa25.65■■□□□ 1.7
COPE-204ENST00000593827 ABCC4O15439 1325 aa25.64■■□□□ 1.7
COPE-204ENST00000593827 ZNF521Q96K83 1311 aa25.64■■□□□ 1.7
COPE-204ENST00000593827 GRAPQ13588 217 aa25.64■■□□□ 1.7
COPE-204ENST00000593827 GRAPLQ8TC17 118 aaPredicted RBP25.64■■□□□ 1.7
COPE-204ENST00000593827 SBF1O95248 1867 aa25.64■■□□□ 1.69
COPE-204ENST00000593827 FKBP5Q13451 457 aaPredicted RBP25.63■■□□□ 1.69
COPE-204ENST00000593827 SUPT20HQ8NEM7 779 aa25.63■■□□□ 1.69
COPE-204ENST00000593827 JDP2Q8WYK2 163 aa25.63■■□□□ 1.69
COPE-204ENST00000593827 SPINK5Q9NQ38 1064 aaPredicted RBP25.63■■□□□ 1.69
COPE-204ENST00000593827 ZNF277Q9NRM2 450 aaPredicted RBP25.63■■□□□ 1.69
COPE-204ENST00000593827 FER1L6Q2WGJ9 1857 aa25.63■■□□□ 1.69
COPE-204ENST00000593827 VEGFAP15692 232 aaPredicted RBP25.62■■□□□ 1.69
COPE-204ENST00000593827 IARSP41252 1262 aaKnown RBP25.62■■□□□ 1.69
COPE-204ENST00000593827 IFFO2Q5TF58 517 aa25.62■■□□□ 1.69
COPE-204ENST00000593827 OLFM4Q6UX06 510 aa25.62■■□□□ 1.69
COPE-204ENST00000593827 VPS33BQ9H267 617 aa25.62■■□□□ 1.69
COPE-204ENST00000593827 RTL5Q5HYW3 569 aaPredicted RBP25.61■■□□□ 1.69
COPE-204ENST00000593827 SP8Q8IXZ3 490 aa25.61■■□□□ 1.69
COPE-204ENST00000593827 RRAGCQ9HB90 399 aa25.61■■□□□ 1.69
COPE-204ENST00000593827 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
COPE-204ENST00000593827 ZNF428Q96B54 188 aa25.6■■□□□ 1.69
COPE-204ENST00000593827 PDE8AO60658 829 aa25.59■■□□□ 1.69
COPE-204ENST00000593827 CCDC152Q4G0S7 254 aa25.59■■□□□ 1.69
COPE-204ENST00000593827 RBM46Q8TBY0 533 aaKnown RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms