RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 TIAM2Q8IVF5 1701 aa15.58■□□□□ 0.08
SOD3-202ENST00000593742 ELL2O00472 640 aaPredicted RBP15.58■□□□□ 0.08
SOD3-202ENST00000593742 DUSP27Q5VZP5 1158 aa15.58■□□□□ 0.08
SOD3-202ENST00000593742 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
SOD3-202ENST00000593742 C16orf71Q8IYS4 520 aaPredicted RBP15.58■□□□□ 0.08
SOD3-202ENST00000593742 ZNF34Q8IZ26 560 aa15.58■□□□□ 0.08
SOD3-202ENST00000593742 DDX21Q9NR30 783 aaKnown RBP eCLIP15.58■□□□□ 0.08
SOD3-202ENST00000593742 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
SOD3-202ENST00000593742 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
SOD3-202ENST00000593742 RRAGCQ9HB90 399 aa15.57■□□□□ 0.08
SOD3-202ENST00000593742 IFT57Q9NWB7 429 aa15.57■□□□□ 0.08
SOD3-202ENST00000593742 FER1L6Q2WGJ9 1857 aa15.57■□□□□ 0.08
SOD3-202ENST00000593742 NTSR2O95665 410 aa15.56■□□□□ 0.08
SOD3-202ENST00000593742 GNAI1P63096 354 aa15.56■□□□□ 0.08
SOD3-202ENST00000593742 PARP10Q53GL7 1025 aa15.56■□□□□ 0.08
SOD3-202ENST00000593742 CCDC93Q567U6 631 aa15.56■□□□□ 0.08
SOD3-202ENST00000593742 SOGA3Q5TF21 947 aa15.56■□□□□ 0.08
SOD3-202ENST00000593742 PPP1R42Q7Z4L9 355 aa15.56■□□□□ 0.08
SOD3-202ENST00000593742 RPGRQ92834 1020 aaKnown RBP15.56■□□□□ 0.08
SOD3-202ENST00000593742 UTP14AQ9BVJ6 771 aaKnown RBP15.56■□□□□ 0.08
SOD3-202ENST00000593742 IBTKQ9P2D0 1353 aaPredicted RBP15.55■□□□□ 0.08
SOD3-202ENST00000593742 KLRG2A4D1S0 409 aaPredicted RBP15.55■□□□□ 0.08
SOD3-202ENST00000593742 TCERG1O14776 1098 aaKnown RBP15.55■□□□□ 0.08
SOD3-202ENST00000593742 HSP90AB3PQ58FF7 597 aa15.55■□□□□ 0.08
SOD3-202ENST00000593742 ZC3H4Q9UPT8 1303 aaKnown RBP15.54■□□□□ 0.08
SOD3-202ENST00000593742 TOMM70O94826 608 aa15.54■□□□□ 0.08
SOD3-202ENST00000593742 HOXB7P09629 217 aa15.54■□□□□ 0.08
SOD3-202ENST00000593742 ZNF853P0CG23 659 aa15.54■□□□□ 0.08
SOD3-202ENST00000593742 ALDH1B1P30837 517 aa15.54■□□□□ 0.08
SOD3-202ENST00000593742 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
SOD3-202ENST00000593742 DBF4Q9UBU7 674 aaPredicted RBP15.54■□□□□ 0.08
SOD3-202ENST00000593742 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
SOD3-202ENST00000593742 HSPA6P17066 643 aa15.53■□□□□ 0.08
SOD3-202ENST00000593742 TSR2Q969E8 191 aaKnown RBP15.53■□□□□ 0.08
SOD3-202ENST00000593742 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
SOD3-202ENST00000593742 ANKRD36CQ5JPF3 1778 aa15.53■□□□□ 0.08
SOD3-202ENST00000593742 GLTPD2A6NH11 291 aa15.52■□□□□ 0.08
SOD3-202ENST00000593742 TCIRG1Q13488 830 aa15.52■□□□□ 0.08
SOD3-202ENST00000593742 CRY2Q49AN0 593 aa15.52■□□□□ 0.08
SOD3-202ENST00000593742 NLRP10Q86W26 655 aa15.52■□□□□ 0.08
SOD3-202ENST00000593742 C7orf43Q8WVR3 580 aa15.52■□□□□ 0.08
SOD3-202ENST00000593742 RBM17Q96I25 401 aaKnown RBP15.52■□□□□ 0.08
SOD3-202ENST00000593742 TRMT112Q9UI30 125 aaKnown RBP15.52■□□□□ 0.08
SOD3-202ENST00000593742 CEP350Q5VT06 3117 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 DICER1Q9UPY3 1922 aaKnown RBP15.51■□□□□ 0.07
SOD3-202ENST00000593742 LTBP3Q9NS15 1303 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 ATP5J2-PTCD1G3V325 749 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
SOD3-202ENST00000593742 FKBP4Q02790 459 aaKnown RBP eCLIP15.51■□□□□ 0.07
SOD3-202ENST00000593742 DPY19L2Q6NUT2 758 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 ANKRD13DQ6ZTN6 518 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 SLC51AQ86UW1 340 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 SYNE4Q8N205 404 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 C8orf58Q8NAV2 365 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 PLBD2Q8NHP8 589 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
SOD3-202ENST00000593742 PPEF1O14829 653 aaPredicted RBP15.5■□□□□ 0.07
SOD3-202ENST00000593742 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
SOD3-202ENST00000593742 RTKN2Q8IZC4 609 aa15.5■□□□□ 0.07
SOD3-202ENST00000593742 PHAXQ9H814 394 aaKnown RBP15.5■□□□□ 0.07
SOD3-202ENST00000593742 RTL5Q5HYW3 569 aaPredicted RBP15.49■□□□□ 0.07
SOD3-202ENST00000593742 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
SOD3-202ENST00000593742 WWC1Q8IX03 1113 aa15.49■□□□□ 0.07
SOD3-202ENST00000593742 FAM9BQ8IZU0 186 aa15.49■□□□□ 0.07
SOD3-202ENST00000593742 RBM46Q8TBY0 533 aaKnown RBP15.49■□□□□ 0.07
SOD3-202ENST00000593742 RIC1Q4ADV7 1423 aa15.49■□□□□ 0.07
SOD3-202ENST00000593742 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
SOD3-202ENST00000593742 DDNO94850 711 aaPredicted RBP15.48■□□□□ 0.07
SOD3-202ENST00000593742 VEGFAP15692 232 aaPredicted RBP15.48■□□□□ 0.07
SOD3-202ENST00000593742 TSPYL6Q8N831 410 aa15.48■□□□□ 0.07
SOD3-202ENST00000593742 ABCC4O15439 1325 aa15.47■□□□□ 0.07
SOD3-202ENST00000593742 HOXA10P31260 410 aaPredicted RBP15.47■□□□□ 0.07
SOD3-202ENST00000593742 IARSP41252 1262 aaKnown RBP15.47■□□□□ 0.07
SOD3-202ENST00000593742 CRAMP1Q96RY5 1269 aa15.47■□□□□ 0.07
SOD3-202ENST00000593742 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
SOD3-202ENST00000593742 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
SOD3-202ENST00000593742 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
SOD3-202ENST00000593742 SLC10A5Q5PT55 438 aa15.46■□□□□ 0.07
SOD3-202ENST00000593742 CCDC30Q5VVM6 783 aa15.46■□□□□ 0.07
SOD3-202ENST00000593742 FAM89AQ96GI7 184 aa15.46■□□□□ 0.07
SOD3-202ENST00000593742 MYD88Q99836 296 aa15.46■□□□□ 0.07
SOD3-202ENST00000593742 ZNF541Q9H0D2 1346 aa15.45■□□□□ 0.06
SOD3-202ENST00000593742 LAMB2P55268 1798 aa15.45■□□□□ 0.06
SOD3-202ENST00000593742 DDX46Q7L014 1031 aaKnown RBP15.45■□□□□ 0.06
SOD3-202ENST00000593742 SMC1BQ8NDV3 1235 aa15.45■□□□□ 0.06
SOD3-202ENST00000593742 ISCA1Q9BUE6 129 aa15.45■□□□□ 0.06
SOD3-202ENST00000593742 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
SOD3-202ENST00000593742 APLP1P51693 650 aa15.44■□□□□ 0.06
SOD3-202ENST00000593742 HTRA3P83110 453 aa15.44■□□□□ 0.06
SOD3-202ENST00000593742 FSTL1Q12841 308 aa15.44■□□□□ 0.06
SOD3-202ENST00000593742 CC2D2BQ6DHV5 1058 aa15.44■□□□□ 0.06
SOD3-202ENST00000593742 JDP2Q8WYK2 163 aa15.44■□□□□ 0.06
SOD3-202ENST00000593742 PSMD1Q99460 953 aa15.44■□□□□ 0.06
SOD3-202ENST00000593742 POTECB2RU33 542 aa15.43■□□□□ 0.06
SOD3-202ENST00000593742 TWISTNBQ3B726 338 aaPredicted RBP15.43■□□□□ 0.06
SOD3-202ENST00000593742 LARGE2Q8N3Y3 721 aa15.43■□□□□ 0.06
SOD3-202ENST00000593742 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
SOD3-202ENST00000593742 STK31Q9BXU1 1019 aa15.43■□□□□ 0.06
SOD3-202ENST00000593742 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms