RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PATL2C9JE40 543 aaKnown RBP8.9□□□□□ -0.98
SMAD4-216ENST00000593223 H3BRB1 525 aa8.9□□□□□ -0.98
SMAD4-216ENST00000593223 EFSO43281 561 aa8.9□□□□□ -0.98
SMAD4-216ENST00000593223 CTBSQ01459 385 aa8.9□□□□□ -0.98
SMAD4-216ENST00000593223 GLYCTKQ8IVS8 523 aa8.9□□□□□ -0.98
SMAD4-216ENST00000593223 KCTD17Q8N5Z5 321 aa8.9□□□□□ -0.98
SMAD4-216ENST00000593223 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
SMAD4-216ENST00000593223 STRN4Q9NRL3 753 aa8.9□□□□□ -0.98
SMAD4-216ENST00000593223 EGFL7Q9UHF1 273 aa8.9□□□□□ -0.98
SMAD4-216ENST00000593223 FAM13AO94988 1023 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 MPSTP25325 297 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 INPP5BP32019 993 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 ZAP70P43403 619 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 NOM1Q5C9Z4 860 aaKnown RBP8.89□□□□□ -0.99
SMAD4-216ENST00000593223 RGL4Q8IZJ4 473 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 FAM13BQ9NYF5 915 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 PRR12Q9ULL5 1215 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 IVNS1ABPQ9Y6Y0 642 aa8.89□□□□□ -0.99
SMAD4-216ENST00000593223 ICMTO60725 284 aa8.88□□□□□ -0.99
SMAD4-216ENST00000593223 KRT76Q01546 638 aa8.88□□□□□ -0.99
SMAD4-216ENST00000593223 FAM26DQ5JW98 314 aa8.88□□□□□ -0.99
SMAD4-216ENST00000593223 CMTR1Q8N1G2 835 aaKnown RBP8.88□□□□□ -0.99
SMAD4-216ENST00000593223 IGF1RP08069 1367 aa8.87□□□□□ -0.99
SMAD4-216ENST00000593223 OPLAHO14841 1288 aa8.87□□□□□ -0.99
SMAD4-216ENST00000593223 ZBTB39O15060 712 aa8.87□□□□□ -0.99
SMAD4-216ENST00000593223 MAP2K3P46734 347 aa8.87□□□□□ -0.99
SMAD4-216ENST00000593223 SRSF11Q05519 484 aaKnown RBP8.87□□□□□ -0.99
SMAD4-216ENST00000593223 ALKBH2Q6NS38 261 aa8.87□□□□□ -0.99
SMAD4-216ENST00000593223 GPR152Q8TDT2 470 aa8.87□□□□□ -0.99
SMAD4-216ENST00000593223 GNEQ9Y223 722 aaKnown RBP8.87□□□□□ -0.99
SMAD4-216ENST00000593223 USP20Q9Y2K6 914 aa8.87□□□□□ -0.99
SMAD4-216ENST00000593223 RTCBQ9Y3I0 505 aaKnown RBP8.87□□□□□ -0.99
SMAD4-216ENST00000593223 EIF1AXP47813 144 aaKnown RBP8.86□□□□□ -0.99
SMAD4-216ENST00000593223 KCNQ4P56696 695 aa8.86□□□□□ -0.99
SMAD4-216ENST00000593223 SPEM2Q0P670 501 aa8.86□□□□□ -0.99
SMAD4-216ENST00000593223 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
SMAD4-216ENST00000593223 FAM182BQ5T319 152 aa8.86□□□□□ -0.99
SMAD4-216ENST00000593223 ATCAYQ86WG3 371 aa8.86□□□□□ -0.99
SMAD4-216ENST00000593223 PIK3R5Q8WYR1 880 aa8.86□□□□□ -0.99
SMAD4-216ENST00000593223 PNMA5Q96PV4 448 aa8.86□□□□□ -0.99
SMAD4-216ENST00000593223 BIN2Q9UBW5 565 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-216ENST00000593223 ADAMTS2O95450 1211 aa8.85□□□□□ -0.99
SMAD4-216ENST00000593223 DNM1Q05193 864 aaKnown RBP8.85□□□□□ -0.99
SMAD4-216ENST00000593223 GRIN2CQ14957 1233 aa8.85□□□□□ -0.99
SMAD4-216ENST00000593223 HCN2Q9UL51 889 aa8.85□□□□□ -0.99
SMAD4-216ENST00000593223 C2CD2LO14523 706 aa8.84□□□□□ -0.99
SMAD4-216ENST00000593223 PCSK2P16519 638 aa8.84□□□□□ -0.99
SMAD4-216ENST00000593223 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-216ENST00000593223 TTC16Q8NEE8 873 aa8.84□□□□□ -0.99
SMAD4-216ENST00000593223 SLC30A3Q99726 388 aa8.84□□□□□ -0.99
SMAD4-216ENST00000593223 SOWAHDA6NJG2 315 aa8.83□□□□□ -1
SMAD4-216ENST00000593223 NPR3P17342 541 aa8.83□□□□□ -1
SMAD4-216ENST00000593223 CCINQ13939 588 aa8.83□□□□□ -1
SMAD4-216ENST00000593223 EDEM1Q92611 657 aa8.83□□□□□ -1
SMAD4-216ENST00000593223 BHMTQ93088 406 aa8.83□□□□□ -1
SMAD4-216ENST00000593223 XYLBO75191 536 aa8.82□□□□□ -1
SMAD4-216ENST00000593223 KRT25Q7Z3Z0 450 aa8.82□□□□□ -1
SMAD4-216ENST00000593223 NUDT16Q96DE0 195 aaKnown RBP8.82□□□□□ -1
SMAD4-216ENST00000593223 OXCT2Q9BYC2 517 aaPredicted RBP8.82□□□□□ -1
SMAD4-216ENST00000593223 FNDC3AQ9Y2H6 1198 aaKnown RBP8.82□□□□□ -1
SMAD4-216ENST00000593223 UBAP1LF5GYI3 381 aa8.81□□□□□ -1
SMAD4-216ENST00000593223 GRNP28799 593 aaKnown RBP8.81□□□□□ -1
SMAD4-216ENST00000593223 PCBP4P57723 403 aaKnown RBP8.81□□□□□ -1
SMAD4-216ENST00000593223 SYT9Q86SS6 491 aa8.81□□□□□ -1
SMAD4-216ENST00000593223 GSX2Q9BZM3 304 aa8.81□□□□□ -1
SMAD4-216ENST00000593223 SASH3O75995 380 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 RPLP1P05386 114 aaKnown RBP8.8□□□□□ -1
SMAD4-216ENST00000593223 ARAFP10398 606 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 NFKB1P19838 968 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
SMAD4-216ENST00000593223 MZF1P28698 734 aaPredicted RBP8.8□□□□□ -1
SMAD4-216ENST00000593223 C8orf34Q49A92 452 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 ZNF468Q5VIY5 522 aaPredicted RBP8.8□□□□□ -1
SMAD4-216ENST00000593223 IGFLR1Q9H665 355 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 GGA1Q9UJY5 639 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 GDF2Q9UK05 429 aaPredicted RBP8.8□□□□□ -1
SMAD4-216ENST00000593223 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 POLIQ9UNA4 740 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.8□□□□□ -1
SMAD4-216ENST00000593223 KCNMB2Q9Y691 235 aa8.8□□□□□ -1
SMAD4-216ENST00000593223 NEURL1BA8MQ27 555 aa8.79□□□□□ -1
SMAD4-216ENST00000593223 PDGFAP04085 211 aa8.79□□□□□ -1
SMAD4-216ENST00000593223 SLURP2P0DP57 97 aa8.79□□□□□ -1
SMAD4-216ENST00000593223 ADH6P28332 368 aa8.79□□□□□ -1
SMAD4-216ENST00000593223 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
SMAD4-216ENST00000593223 GOLGA6L1Q8N7Z2 621 aa8.79□□□□□ -1
SMAD4-216ENST00000593223 C11orf16Q9NQ32 467 aa8.79□□□□□ -1
SMAD4-216ENST00000593223 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
SMAD4-216ENST00000593223 NDUFB5O43674 189 aa8.78□□□□□ -1
SMAD4-216ENST00000593223 RARAP10276 462 aa8.78□□□□□ -1
SMAD4-216ENST00000593223 TARSP26639 723 aaKnown RBP8.78□□□□□ -1
SMAD4-216ENST00000593223 MAP3K10Q02779 954 aa8.78□□□□□ -1
SMAD4-216ENST00000593223 ACDQ96AP0 544 aa8.78□□□□□ -1
SMAD4-216ENST00000593223 EFCC1Q9HA90 598 aa8.78□□□□□ -1
SMAD4-216ENST00000593223 CCDC87Q9NVE4 849 aa8.78□□□□□ -1
SMAD4-216ENST00000593223 ZBTB7CA1YPR0 619 aa8.77□□□□□ -1.01
SMAD4-216ENST00000593223 FZD6O60353 706 aa8.77□□□□□ -1.01
SMAD4-216ENST00000593223 USP5P45974 858 aa8.77□□□□□ -1.01
SMAD4-216ENST00000593223 ARHGAP4P98171 946 aa8.77□□□□□ -1.01
SMAD4-216ENST00000593223 TRIP4Q15650 581 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms