RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
CIRBP-242ENST00000593093 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-242ENST00000593093 TTC14Q96N46 770 aa16.81■□□□□ 0.28
CIRBP-242ENST00000593093 SDF4Q9BRK5 362 aa16.81■□□□□ 0.28
CIRBP-242ENST00000593093 BIN1O00499 593 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 FTOQ9C0B1 505 aaKnown RBP eCLIP16.8■□□□□ 0.288e-7■□□□□ 9.3
CIRBP-242ENST00000593093 TCHHQ07283 1943 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 GLRX3O76003 335 aaKnown RBP16.8■□□□□ 0.28
CIRBP-242ENST00000593093 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
CIRBP-242ENST00000593093 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 PDCP20941 246 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 TNNT3P45378 269 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-242ENST00000593093 KRT222Q8N1A0 295 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 TMEM87AQ8NBN3 555 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 ANKRD7Q92527 254 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 FUCA2Q9BTY2 467 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 DIP2BQ9P265 1576 aa16.8■□□□□ 0.28
CIRBP-242ENST00000593093 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
CIRBP-242ENST00000593093 CCDC69A6NI79 296 aa16.79■□□□□ 0.28
CIRBP-242ENST00000593093 CREB3L3Q68CJ9 461 aa16.79■□□□□ 0.28
CIRBP-242ENST00000593093 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-242ENST00000593093 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
CIRBP-242ENST00000593093 ME1P48163 572 aa16.79■□□□□ 0.28
CIRBP-242ENST00000593093 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-242ENST00000593093 GNL2Q13823 731 aaKnown RBP16.79■□□□□ 0.28
CIRBP-242ENST00000593093 LMOD2Q6P5Q4 547 aa16.79■□□□□ 0.28
CIRBP-242ENST00000593093 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
CIRBP-242ENST00000593093 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-242ENST00000593093 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
CIRBP-242ENST00000593093 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 TNRQ92752 1358 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 LEO1Q8WVC0 666 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-242ENST00000593093 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-242ENST00000593093 CCDC73Q6ZRK6 1079 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 PAXBP1Q9Y5B6 917 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 ACEP12821 1306 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 NLRP6P59044 892 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 SF3A1Q15459 793 aaKnown RBP16.78■□□□□ 0.28
CIRBP-242ENST00000593093 BRF1Q92994 677 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 EYA1Q99502 592 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
CIRBP-242ENST00000593093 CCT2P78371 535 aaKnown RBP16.77■□□□□ 0.28
CIRBP-242ENST00000593093 VPS53Q5VIR6 699 aa16.77■□□□□ 0.28
CIRBP-242ENST00000593093 TAF3Q5VWG9 929 aa16.77■□□□□ 0.28
CIRBP-242ENST00000593093 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.28
CIRBP-242ENST00000593093 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
CIRBP-242ENST00000593093 KINO60870 393 aaKnown RBP16.77■□□□□ 0.27
CIRBP-242ENST00000593093 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.27
CIRBP-242ENST00000593093 ECHDC1Q9NTX5 307 aa16.77■□□□□ 0.27
CIRBP-242ENST00000593093 PTPN21Q16825 1174 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 KIF18AQ8NI77 898 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
CIRBP-242ENST00000593093 GNAT3A8MTJ3 354 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 APPP05067 770 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 PSMA5P28066 241 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
CIRBP-242ENST00000593093 ERCC6LQ2NKX8 1250 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 KMT5BQ4FZB7 885 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 DNAJC2Q99543 621 aaKnown RBP16.76■□□□□ 0.27
CIRBP-242ENST00000593093 A2ML1A8K2U0 1454 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 RNF20Q5VTR2 975 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-242ENST00000593093 AOPEPQ8N6M6 819 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 SETBP1Q9Y6X0 1596 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
CIRBP-242ENST00000593093 IFT172Q9UG01 1749 aa16.75■□□□□ 0.27
CIRBP-242ENST00000593093 CCDC66A2RUB6 948 aa16.75■□□□□ 0.27
CIRBP-242ENST00000593093 TEFQ10587 303 aa16.75■□□□□ 0.27
CIRBP-242ENST00000593093 SYT10Q6XYQ8 523 aa16.75■□□□□ 0.27
CIRBP-242ENST00000593093 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
CIRBP-242ENST00000593093 SALL3Q9BXA9 1300 aa16.75■□□□□ 0.27
CIRBP-242ENST00000593093 FBXO38Q6PIJ6 1188 aa16.75■□□□□ 0.27
CIRBP-242ENST00000593093 PREX1Q8TCU6 1659 aa16.75■□□□□ 0.27
CIRBP-242ENST00000593093 CTIFO43310 598 aaKnown RBP16.75■□□□□ 0.27
CIRBP-242ENST00000593093 CWF19L2Q2TBE0 894 aaKnown RBP16.75■□□□□ 0.27
CIRBP-242ENST00000593093 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
CIRBP-242ENST00000593093 RAB11FIP4Q86YS3 637 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 SSH3Q8TE77 659 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 DDX41Q9UJV9 622 aaKnown RBP16.74■□□□□ 0.27
CIRBP-242ENST00000593093 NPHP3Q7Z494 1330 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 PTPRMP28827 1452 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 ZNF397Q8NF99 534 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-242ENST00000593093 KIAA0232Q92628 1395 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 LRRC8AQ8IWT6 810 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
CIRBP-242ENST00000593093 TMC6Q7Z403 805 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 ST3GAL1Q11201 340 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 CHST3Q7LGC8 479 aa16.73■□□□□ 0.27
CIRBP-242ENST00000593093 PGBD1Q96JS3 809 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms