RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 AOC2O75106 756 aa13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 HOXA10P31260 410 aaPredicted RBP13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 HHIPL1Q96JK4 782 aa13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 BCORQ6W2J9 1755 aa13.62□□□□□ -0.23
SMCO4P1-201ENST00000592909 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
SMCO4P1-201ENST00000592909 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
SMCO4P1-201ENST00000592909 HLFQ16534 295 aa13.61□□□□□ -0.23
SMCO4P1-201ENST00000592909 LARGE2Q8N3Y3 721 aa13.61□□□□□ -0.23
SMCO4P1-201ENST00000592909 COL4A5P29400 1685 aa13.6□□□□□ -0.23
SMCO4P1-201ENST00000592909 LTBP1Q14766 1721 aa13.6□□□□□ -0.23
SMCO4P1-201ENST00000592909 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
SMCO4P1-201ENST00000592909 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
SMCO4P1-201ENST00000592909 ADARB2Q9NS39 739 aaKnown RBP13.6□□□□□ -0.23
SMCO4P1-201ENST00000592909 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
SMCO4P1-201ENST00000592909 CC2D1BQ5T0F9 858 aaKnown RBP13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 NIM1KQ8IY84 436 aa13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 VPS33BQ9H267 617 aa13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 PGAP2Q9UHJ9 254 aa13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 KIF7Q2M1P5 1343 aa13.59□□□□□ -0.23
SMCO4P1-201ENST00000592909 ABCC12Q96J65 1359 aa13.58□□□□□ -0.23
SMCO4P1-201ENST00000592909 ERVV-1B6SEH8 477 aa13.58□□□□□ -0.24
SMCO4P1-201ENST00000592909 CELF2O95319 508 aaKnown RBP13.58□□□□□ -0.24
SMCO4P1-201ENST00000592909 NUTM1Q86Y26 1132 aa13.58□□□□□ -0.24
SMCO4P1-201ENST00000592909 RPGRQ92834 1020 aaKnown RBP13.58□□□□□ -0.24
SMCO4P1-201ENST00000592909 CRAMP1Q96RY5 1269 aa13.58□□□□□ -0.24
SMCO4P1-201ENST00000592909 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
SMCO4P1-201ENST00000592909 DGKZQ13574 1117 aa13.57□□□□□ -0.24
SMCO4P1-201ENST00000592909 RBM17Q96I25 401 aaKnown RBP13.57□□□□□ -0.24
SMCO4P1-201ENST00000592909 RSPH6AQ9H0K4 717 aa13.57□□□□□ -0.24
SMCO4P1-201ENST00000592909 PPEF1O14829 653 aaPredicted RBP13.56□□□□□ -0.24
SMCO4P1-201ENST00000592909 PPIP5K2O43314 1243 aa13.56□□□□□ -0.24
SMCO4P1-201ENST00000592909 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
SMCO4P1-201ENST00000592909 ZC3H15Q8WU90 426 aaKnown RBP13.56□□□□□ -0.24
SMCO4P1-201ENST00000592909 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
SMCO4P1-201ENST00000592909 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
SMCO4P1-201ENST00000592909 PDE4DIPQ5VU43 2346 aa13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 CXCL9Q07325 125 aa13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 CIAPIN1Q6FI81 312 aa13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 MCM10Q7L590 875 aa13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 GLIS2Q9BZE0 524 aaPredicted RBP13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 ZNRF3Q9ULT6 936 aa13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 IBTKQ9P2D0 1353 aaPredicted RBP13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
SMCO4P1-201ENST00000592909 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
SMCO4P1-201ENST00000592909 NOGQ13253 232 aa13.54□□□□□ -0.24
SMCO4P1-201ENST00000592909 AOC3Q16853 763 aa13.54□□□□□ -0.24
SMCO4P1-201ENST00000592909 CDC37L1Q7L3B6 337 aa13.54□□□□□ -0.24
SMCO4P1-201ENST00000592909 SLC51AQ86UW1 340 aa13.54□□□□□ -0.24
SMCO4P1-201ENST00000592909 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
SMCO4P1-201ENST00000592909 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
SMCO4P1-201ENST00000592909 GMPSP49915 693 aaPredicted RBP13.53□□□□□ -0.24
SMCO4P1-201ENST00000592909 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
SMCO4P1-201ENST00000592909 SUPT20HQ8NEM7 779 aa13.53□□□□□ -0.24
SMCO4P1-201ENST00000592909 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
SMCO4P1-201ENST00000592909 TMX4Q9H1E5 349 aaPredicted RBP13.53□□□□□ -0.24
SMCO4P1-201ENST00000592909 ATP6V0A2Q9Y487 856 aa13.53□□□□□ -0.24
SMCO4P1-201ENST00000592909 TRPM7Q96QT4 1865 aa13.53□□□□□ -0.24
SMCO4P1-201ENST00000592909 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 TAF7Q15545 349 aaPredicted RBP13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 ZNF34Q8IZ26 560 aa13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 ZNF408Q9H9D4 720 aa13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 UBN2Q6ZU65 1347 aa13.52□□□□□ -0.25
SMCO4P1-201ENST00000592909 NTSR2O95665 410 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 GPTP24298 496 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 DCTN1Q14203 1278 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 KIF6Q6ZMV9 814 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 NLRP3Q96P20 1036 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 SAGE1Q9NXZ1 904 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
SMCO4P1-201ENST00000592909 HUNKP57058 714 aa13.5□□□□□ -0.25
SMCO4P1-201ENST00000592909 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
SMCO4P1-201ENST00000592909 TNIP1Q15025 636 aa13.5□□□□□ -0.25
SMCO4P1-201ENST00000592909 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
SMCO4P1-201ENST00000592909 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
SMCO4P1-201ENST00000592909 BCL2L13Q9BXK5 485 aa13.5□□□□□ -0.25
SMCO4P1-201ENST00000592909 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
SMCO4P1-201ENST00000592909 BBOX1O75936 387 aa13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 PPP1R42Q7Z4L9 355 aa13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 SP8Q8IXZ3 490 aa13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 TRPM4Q8TD43 1214 aa13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 ZBTB3Q9H5J0 574 aa13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 CNOT7Q9UIV1 285 aaKnown RBP13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
SMCO4P1-201ENST00000592909 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 H7C1D1 291 aa13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 RAD17O75943 681 aa13.48□□□□□ -0.25
SMCO4P1-201ENST00000592909 U2AF1L5P0DN76 240 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms