RNA–Protein interactions for RNA: ENST00000592871.1

LIN37-208, Transcript of lin-37 DREAM MuvB core complex component, humanhuman

TSL 4

Gene LIN37, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN37-208ENST00000592871 NLRP10Q86W26 655 aa13.26□□□□□ -0.29
LIN37-208ENST00000592871 MASTLQ96GX5 879 aa13.26□□□□□ -0.29
LIN37-208ENST00000592871 UTP14AQ9BVJ6 771 aaKnown RBP13.26□□□□□ -0.29
LIN37-208ENST00000592871 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
LIN37-208ENST00000592871 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
LIN37-208ENST00000592871 CNKSR1Q969H4 720 aa13.25□□□□□ -0.29
LIN37-208ENST00000592871 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
LIN37-208ENST00000592871 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
LIN37-208ENST00000592871 VAMP4O75379 141 aa13.24□□□□□ -0.29
LIN37-208ENST00000592871 DDX58O95786 925 aaKnown RBP13.24□□□□□ -0.29
LIN37-208ENST00000592871 NPR1P16066 1061 aa13.24□□□□□ -0.29
LIN37-208ENST00000592871 PRPF40BQ6NWY9 871 aaKnown RBP13.24□□□□□ -0.29
LIN37-208ENST00000592871 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
LIN37-208ENST00000592871 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
LIN37-208ENST00000592871 SBF1O95248 1867 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 ADCY9O60503 1353 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 LAMB2P55268 1798 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 RASSF7Q02833 373 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 CRY2Q49AN0 593 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 G2E3Q7L622 706 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
LIN37-208ENST00000592871 MYD88Q99836 296 aa13.23□□□□□ -0.29
LIN37-208ENST00000592871 TRMT112Q9UI30 125 aaKnown RBP13.23□□□□□ -0.29
LIN37-208ENST00000592871 SH3TC1Q8TE82 1336 aa13.22□□□□□ -0.29
LIN37-208ENST00000592871 E9PSI1 815 aa13.22□□□□□ -0.29
LIN37-208ENST00000592871 C21orf2O43822 256 aa13.22□□□□□ -0.29
LIN37-208ENST00000592871 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
LIN37-208ENST00000592871 SYNE4Q8N205 404 aa13.22□□□□□ -0.29
LIN37-208ENST00000592871 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
LIN37-208ENST00000592871 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
LIN37-208ENST00000592871 FER1L6Q2WGJ9 1857 aa13.22□□□□□ -0.29
LIN37-208ENST00000592871 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
LIN37-208ENST00000592871 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
LIN37-208ENST00000592871 PI4KAP2A4QPH2 592 aa13.21□□□□□ -0.29
LIN37-208ENST00000592871 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
LIN37-208ENST00000592871 FLIIQ13045 1269 aa13.21□□□□□ -0.29
LIN37-208ENST00000592871 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
LIN37-208ENST00000592871 SLC10A5Q5PT55 438 aa13.21□□□□□ -0.29
LIN37-208ENST00000592871 KSR2Q6VAB6 950 aa13.21□□□□□ -0.29
LIN37-208ENST00000592871 PI4KAP1Q8N8J0 262 aa13.21□□□□□ -0.29
LIN37-208ENST00000592871 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.29
LIN37-208ENST00000592871 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
LIN37-208ENST00000592871 FKBP5Q13451 457 aaPredicted RBP13.2□□□□□ -0.3
LIN37-208ENST00000592871 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
LIN37-208ENST00000592871 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
LIN37-208ENST00000592871 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
LIN37-208ENST00000592871 RNF181Q9P0P0 153 aa13.2□□□□□ -0.3
LIN37-208ENST00000592871 NFKBIEO00221 500 aa13.19□□□□□ -0.3
LIN37-208ENST00000592871 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
LIN37-208ENST00000592871 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
LIN37-208ENST00000592871 SOGA3Q5TF21 947 aa13.19□□□□□ -0.3
LIN37-208ENST00000592871 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
LIN37-208ENST00000592871 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
LIN37-208ENST00000592871 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
LIN37-208ENST00000592871 NEXNQ0ZGT2 675 aa13.18□□□□□ -0.3
LIN37-208ENST00000592871 CCDC93Q567U6 631 aa13.18□□□□□ -0.3
LIN37-208ENST00000592871 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
LIN37-208ENST00000592871 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
LIN37-208ENST00000592871 ZNF526Q8TF50 670 aaPredicted RBP13.18□□□□□ -0.3
LIN37-208ENST00000592871 C7orf43Q8WVR3 580 aa13.18□□□□□ -0.3
LIN37-208ENST00000592871 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
LIN37-208ENST00000592871 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
LIN37-208ENST00000592871 TAF1P21675 1872 aa13.17□□□□□ -0.3
LIN37-208ENST00000592871 IRS4O14654 1257 aaPredicted RBP13.17□□□□□ -0.3
LIN37-208ENST00000592871 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
LIN37-208ENST00000592871 LMNB1P20700 586 aa13.17□□□□□ -0.3
LIN37-208ENST00000592871 PRELPP51888 382 aa13.17□□□□□ -0.3
LIN37-208ENST00000592871 OLFM4Q6UX06 510 aa13.17□□□□□ -0.3
LIN37-208ENST00000592871 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
LIN37-208ENST00000592871 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
LIN37-208ENST00000592871 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
LIN37-208ENST00000592871 ABCC4O15439 1325 aa13.16□□□□□ -0.3
LIN37-208ENST00000592871 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
LIN37-208ENST00000592871 PCCAP05165 728 aaPredicted RBP13.16□□□□□ -0.3
LIN37-208ENST00000592871 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
LIN37-208ENST00000592871 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
LIN37-208ENST00000592871 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
LIN37-208ENST00000592871 LTBP3Q9NS15 1303 aa13.15□□□□□ -0.3
LIN37-208ENST00000592871 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
LIN37-208ENST00000592871 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIN37-208ENST00000592871 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
LIN37-208ENST00000592871 SLC51AQ86UW1 340 aa13.15□□□□□ -0.3
LIN37-208ENST00000592871 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
LIN37-208ENST00000592871 MYH3P11055 1940 aa13.15□□□□□ -0.3
LIN37-208ENST00000592871 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
LIN37-208ENST00000592871 F6X3S4 739 aa13.14□□□□□ -0.31
LIN37-208ENST00000592871 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
LIN37-208ENST00000592871 FKBP4Q02790 459 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIN37-208ENST00000592871 RTKN2Q8IZC4 609 aa13.14□□□□□ -0.31
LIN37-208ENST00000592871 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
LIN37-208ENST00000592871 GRAPQ13588 217 aa13.13□□□□□ -0.31
LIN37-208ENST00000592871 SF3B3Q15393 1217 aaKnown RBP13.13□□□□□ -0.31
LIN37-208ENST00000592871 CC2D2BQ6DHV5 1058 aa13.13□□□□□ -0.31
LIN37-208ENST00000592871 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
LIN37-208ENST00000592871 LINS1Q8NG48 757 aa13.13□□□□□ -0.31
LIN37-208ENST00000592871 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
LIN37-208ENST00000592871 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
LIN37-208ENST00000592871 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
LIN37-208ENST00000592871 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms