RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 RNF123Q5XPI4 1314 aa12.6□□□□□ -0.39
PRKCSH-215ENST00000592435 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 PLBD2Q8NHP8 589 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 RPGRQ92834 1020 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 CRAMP1Q96RY5 1269 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 NUP98P52948 1817 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 SLX4Q8IY92 1834 aa12.59□□□□□ -0.39
PRKCSH-215ENST00000592435 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRKCSH-215ENST00000592435 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
PRKCSH-215ENST00000592435 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
PRKCSH-215ENST00000592435 FSTL1Q12841 308 aa12.57□□□□□ -0.4
PRKCSH-215ENST00000592435 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
PRKCSH-215ENST00000592435 MRS2Q9HD23 443 aa12.57□□□□□ -0.4
PRKCSH-215ENST00000592435 FER1L6Q2WGJ9 1857 aa12.57□□□□□ -0.4
PRKCSH-215ENST00000592435 CEP350Q5VT06 3117 aa12.56□□□□□ -0.4
PRKCSH-215ENST00000592435 TRIM28Q13263 835 aaKnown RBP12.56□□□□□ -0.4
PRKCSH-215ENST00000592435 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
PRKCSH-215ENST00000592435 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
PRKCSH-215ENST00000592435 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
PRKCSH-215ENST00000592435 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
PRKCSH-215ENST00000592435 POTECB2RU33 542 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 APLP1P51693 650 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 PSMD1Q99460 953 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
PRKCSH-215ENST00000592435 BBOX1O75936 387 aa12.54□□□□□ -0.4
PRKCSH-215ENST00000592435 CCDC30Q5VVM6 783 aa12.54□□□□□ -0.4
PRKCSH-215ENST00000592435 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
PRKCSH-215ENST00000592435 ZNF277Q9NRM2 450 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-215ENST00000592435 IL16Q14005 1332 aa12.54□□□□□ -0.4
PRKCSH-215ENST00000592435 TNRC6CQ9HCJ0 1690 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-215ENST00000592435 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 DDNO94850 711 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 IARSP41252 1262 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 SNED1Q8TER0 1413 aa12.53□□□□□ -0.4
PRKCSH-215ENST00000592435 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
PRKCSH-215ENST00000592435 FZD9O00144 591 aa12.52□□□□□ -0.41
PRKCSH-215ENST00000592435 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
PRKCSH-215ENST00000592435 TSPYL6Q8N831 410 aa12.52□□□□□ -0.41
PRKCSH-215ENST00000592435 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
PRKCSH-215ENST00000592435 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 JDP2Q8WYK2 163 aa12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 FAM89AQ96GI7 184 aa12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 L3MBTL3Q96JM7 780 aaPredicted RBP12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
PRKCSH-215ENST00000592435 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 SF3B3Q15393 1217 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 TMC4Q7Z404 712 aa12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 DNAJC5GQ8N7S2 189 aa12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 ABCC4O15439 1325 aa12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 WDR90Q96KV7 1748 aa12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 CACNA1SQ13698 1873 aa12.5□□□□□ -0.41
PRKCSH-215ENST00000592435 HSP90B1P14625 803 aaKnown RBP12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 GRAPQ13588 217 aa12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 GPC2Q8N158 579 aa12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 SUPT20HQ8NEM7 779 aa12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 RTFDC1Q9BY42 306 aaPredicted RBP12.49□□□□□ -0.41
PRKCSH-215ENST00000592435 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
PRKCSH-215ENST00000592435 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
PRKCSH-215ENST00000592435 KSR2Q6VAB6 950 aa12.48□□□□□ -0.41
PRKCSH-215ENST00000592435 LARGE2Q8N3Y3 721 aa12.48□□□□□ -0.41
PRKCSH-215ENST00000592435 MYD88Q99836 296 aa12.48□□□□□ -0.41
PRKCSH-215ENST00000592435 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
PRKCSH-215ENST00000592435 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
PRKCSH-215ENST00000592435 EIF6P56537 245 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-215ENST00000592435 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
PRKCSH-215ENST00000592435 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
PRKCSH-215ENST00000592435 DPP8Q6V1X1 898 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms