RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 FOXN1O15353 648 aa20.14■□□□□ 0.81
CXXC1-217ENST00000592078 RIPK4P57078 832 aa20.14■□□□□ 0.81
CXXC1-217ENST00000592078 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
CXXC1-217ENST00000592078 DEFB115Q30KQ5 88 aa20.14■□□□□ 0.81
CXXC1-217ENST00000592078 WBP1LQ9NX94 342 aa20.14■□□□□ 0.81
CXXC1-217ENST00000592078 KCNQ3O43525 872 aa20.13■□□□□ 0.81
CXXC1-217ENST00000592078 VEGFBP49765 207 aa20.13■□□□□ 0.81
CXXC1-217ENST00000592078 EIF6P56537 245 aaKnown RBP20.13■□□□□ 0.81
CXXC1-217ENST00000592078 CNTROBQ8N137 903 aa20.13■□□□□ 0.81
CXXC1-217ENST00000592078 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
CXXC1-217ENST00000592078 ZNF277Q9NRM2 450 aaPredicted RBP20.13■□□□□ 0.81
CXXC1-217ENST00000592078 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
CXXC1-217ENST00000592078 CRY2Q49AN0 593 aa20.12■□□□□ 0.81
CXXC1-217ENST00000592078 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
CXXC1-217ENST00000592078 TMX4Q9H1E5 349 aaPredicted RBP20.12■□□□□ 0.81
CXXC1-217ENST00000592078 VPS33BQ9H267 617 aa20.12■□□□□ 0.81
CXXC1-217ENST00000592078 RRP7AQ9Y3A4 280 aaKnown RBP20.11■□□□□ 0.81
CXXC1-217ENST00000592078 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
CXXC1-217ENST00000592078 IBTKQ9P2D0 1353 aaPredicted RBP20.1■□□□□ 0.81
CXXC1-217ENST00000592078 CACNA1SQ13698 1873 aa20.1■□□□□ 0.81
CXXC1-217ENST00000592078 ECE1P42892 770 aa20.1■□□□□ 0.81
CXXC1-217ENST00000592078 LMOD3Q0VAK6 560 aa20.1■□□□□ 0.81
CXXC1-217ENST00000592078 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
CXXC1-217ENST00000592078 ZNF541Q9H0D2 1346 aa20.09■□□□□ 0.81
CXXC1-217ENST00000592078 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
CXXC1-217ENST00000592078 HOXA10P31260 410 aaPredicted RBP20.09■□□□□ 0.81
CXXC1-217ENST00000592078 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
CXXC1-217ENST00000592078 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
CXXC1-217ENST00000592078 MCM10Q7L590 875 aa20.08■□□□□ 0.81
CXXC1-217ENST00000592078 RPGRQ92834 1020 aaKnown RBP20.08■□□□□ 0.81
CXXC1-217ENST00000592078 BEGAINQ9BUH8 593 aa20.08■□□□□ 0.81
CXXC1-217ENST00000592078 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
CXXC1-217ENST00000592078 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
CXXC1-217ENST00000592078 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
CXXC1-217ENST00000592078 USP50Q70EL3 339 aaPredicted RBP20.07■□□□□ 0.8
CXXC1-217ENST00000592078 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
CXXC1-217ENST00000592078 CRAMP1Q96RY5 1269 aa20.07■□□□□ 0.8
CXXC1-217ENST00000592078 ADAMTSL1Q8N6G6 1762 aa20.07■□□□□ 0.8
CXXC1-217ENST00000592078 IL16Q14005 1332 aa20.06■□□□□ 0.8
CXXC1-217ENST00000592078 WDR33Q9C0J8 1336 aaKnown RBP20.06■□□□□ 0.8
CXXC1-217ENST00000592078 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
CXXC1-217ENST00000592078 PIP4K2AP48426 406 aaPredicted RBP20.06■□□□□ 0.8
CXXC1-217ENST00000592078 YTHDC1Q96MU7 727 aaKnown RBP20.06■□□□□ 0.8
CXXC1-217ENST00000592078 DDX21Q9NR30 783 aaKnown RBP eCLIP20.06■□□□□ 0.8
CXXC1-217ENST00000592078 ABT1Q9ULW3 272 aaKnown RBP20.06■□□□□ 0.8
CXXC1-217ENST00000592078 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
CXXC1-217ENST00000592078 MAP3K15Q6ZN16 1313 aa20.05■□□□□ 0.8
CXXC1-217ENST00000592078 LBX1P52954 281 aa20.05■□□□□ 0.8
CXXC1-217ENST00000592078 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
CXXC1-217ENST00000592078 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
CXXC1-217ENST00000592078 HLFQ16534 295 aa20.04■□□□□ 0.8
CXXC1-217ENST00000592078 MAP1SQ66K74 1059 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-217ENST00000592078 PPP1R42Q7Z4L9 355 aa20.04■□□□□ 0.8
CXXC1-217ENST00000592078 TRMT2AQ8IZ69 625 aaKnown RBP20.04■□□□□ 0.8
CXXC1-217ENST00000592078 SUPT20HQ8NEM7 779 aa20.04■□□□□ 0.8
CXXC1-217ENST00000592078 PARP10Q53GL7 1025 aa20.03■□□□□ 0.8
CXXC1-217ENST00000592078 LARGE2Q8N3Y3 721 aa20.03■□□□□ 0.8
CXXC1-217ENST00000592078 SNED1Q8TER0 1413 aa20.02■□□□□ 0.8
CXXC1-217ENST00000592078 CA12O43570 354 aa20.02■□□□□ 0.8
CXXC1-217ENST00000592078 ZNF853P0CG23 659 aa20.02■□□□□ 0.8
CXXC1-217ENST00000592078 MAP2K2P36507 400 aa20.02■□□□□ 0.8
CXXC1-217ENST00000592078 CALD1Q05682 793 aaKnown RBP20.02■□□□□ 0.8
CXXC1-217ENST00000592078 GOLGA2Q08379 1002 aa20.02■□□□□ 0.8
CXXC1-217ENST00000592078 GJA3Q9Y6H8 435 aa20.02■□□□□ 0.8
CXXC1-217ENST00000592078 HSPA8P11142 646 aaKnown RBP20.01■□□□□ 0.79
CXXC1-217ENST00000592078 DCTN1Q14203 1278 aa20.01■□□□□ 0.79
CXXC1-217ENST00000592078 NIM1KQ8IY84 436 aa20.01■□□□□ 0.79
CXXC1-217ENST00000592078 NLRP3Q96P20 1036 aa20.01■□□□□ 0.79
CXXC1-217ENST00000592078 CDHR2Q9BYE9 1310 aa20.01■□□□□ 0.79
CXXC1-217ENST00000592078 SLFN5Q08AF3 891 aa20■□□□□ 0.79
CXXC1-217ENST00000592078 OLFM4Q6UX06 510 aa20■□□□□ 0.79
CXXC1-217ENST00000592078 GIGYF2Q6Y7W6 1299 aaKnown RBP20■□□□□ 0.79
CXXC1-217ENST00000592078 HHIPL1Q96JK4 782 aa20■□□□□ 0.79
CXXC1-217ENST00000592078 BABAM1Q9NWV8 329 aa20■□□□□ 0.79
CXXC1-217ENST00000592078 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
CXXC1-217ENST00000592078 PPEF1O14829 653 aaPredicted RBP19.99■□□□□ 0.79
CXXC1-217ENST00000592078 ZNF34Q8IZ26 560 aa19.99■□□□□ 0.79
CXXC1-217ENST00000592078 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
CXXC1-217ENST00000592078 ADARB2Q9NS39 739 aaKnown RBP19.99■□□□□ 0.79
CXXC1-217ENST00000592078 E9PSI1 815 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 CHL1O00533 1208 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 SCNN1DP51172 638 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 EIF4A1P60842 406 aaKnown RBP19.98■□□□□ 0.79
CXXC1-217ENST00000592078 NUTM1Q86Y26 1132 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 ZC3H15Q8WU90 426 aaKnown RBP19.98■□□□□ 0.79
CXXC1-217ENST00000592078 ABHD8Q96I13 439 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 CAPNS2Q96L46 248 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 CFAP44Q96MT7 982 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 GPR101Q96P66 508 aaPredicted RBP19.98■□□□□ 0.79
CXXC1-217ENST00000592078 THUMPD2Q9BTF0 503 aaKnown RBP19.98■□□□□ 0.79
CXXC1-217ENST00000592078 IFT57Q9NWB7 429 aa19.98■□□□□ 0.79
CXXC1-217ENST00000592078 BBOX1O75936 387 aa19.97■□□□□ 0.79
CXXC1-217ENST00000592078 SLC10A5Q5PT55 438 aa19.97■□□□□ 0.79
CXXC1-217ENST00000592078 CDCA7LQ96GN5 454 aa19.97■□□□□ 0.79
CXXC1-217ENST00000592078 ATP6V0A2Q9Y487 856 aa19.97■□□□□ 0.79
CXXC1-217ENST00000592078 TLL2Q9Y6L7 1015 aa19.97■□□□□ 0.79
CXXC1-217ENST00000592078 ABCC12Q96J65 1359 aa19.96■□□□□ 0.79
CXXC1-217ENST00000592078 DLG5Q8TDM6 1919 aa19.96■□□□□ 0.79
CXXC1-217ENST00000592078 PPIP5K2O43314 1243 aa19.96■□□□□ 0.79
CXXC1-217ENST00000592078 EPS15P42566 896 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms