RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 KIF3CO14782 793 aa19.66■□□□□ 0.74
ERCC1-213ENST00000592023 SOGA3Q5TF21 947 aa19.66■□□□□ 0.74
ERCC1-213ENST00000592023 NLRP10Q86W26 655 aa19.66■□□□□ 0.74
ERCC1-213ENST00000592023 PLBD2Q8NHP8 589 aa19.66■□□□□ 0.74
ERCC1-213ENST00000592023 RPGRQ92834 1020 aaKnown RBP19.66■□□□□ 0.74
ERCC1-213ENST00000592023 UTP14AQ9BVJ6 771 aaKnown RBP19.66■□□□□ 0.74
ERCC1-213ENST00000592023 NMRK2Q9NPI5 230 aa19.66■□□□□ 0.74
ERCC1-213ENST00000592023 HYPKQ9NX55 129 aa19.66■□□□□ 0.74
ERCC1-213ENST00000592023 TCIRG1Q13488 830 aa19.65■□□□□ 0.74
ERCC1-213ENST00000592023 CCDC93Q567U6 631 aa19.65■□□□□ 0.74
ERCC1-213ENST00000592023 ZNF428Q96B54 188 aa19.65■□□□□ 0.74
ERCC1-213ENST00000592023 LTBP3Q9NS15 1303 aa19.65■□□□□ 0.74
ERCC1-213ENST00000592023 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.74
ERCC1-213ENST00000592023 OLFM4Q6UX06 510 aa19.64■□□□□ 0.73
ERCC1-213ENST00000592023 C3orf67Q6ZVT6 689 aa19.64■□□□□ 0.73
ERCC1-213ENST00000592023 TSPYL6Q8N831 410 aa19.64■□□□□ 0.73
ERCC1-213ENST00000592023 RNF123Q5XPI4 1314 aa19.64■□□□□ 0.73
ERCC1-213ENST00000592023 KDM2BQ8NHM5 1336 aa19.64■□□□□ 0.73
ERCC1-213ENST00000592023 ZC3H4Q9UPT8 1303 aaKnown RBP19.64■□□□□ 0.73
ERCC1-213ENST00000592023 ALDH1B1P30837 517 aa19.63■□□□□ 0.73
ERCC1-213ENST00000592023 ANKRD13DQ6ZTN6 518 aa19.63■□□□□ 0.73
ERCC1-213ENST00000592023 C7orf43Q8WVR3 580 aa19.63■□□□□ 0.73
ERCC1-213ENST00000592023 PHAXQ9H814 394 aaKnown RBP19.63■□□□□ 0.73
ERCC1-213ENST00000592023 IL16Q14005 1332 aa19.62■□□□□ 0.73
ERCC1-213ENST00000592023 GOLGA2Q08379 1002 aa19.62■□□□□ 0.73
ERCC1-213ENST00000592023 TRMT112Q9UI30 125 aaKnown RBP19.62■□□□□ 0.73
ERCC1-213ENST00000592023 DDX60Q8IY21 1712 aaKnown RBP19.62■□□□□ 0.73
ERCC1-213ENST00000592023 FANCIQ9NVI1 1328 aa19.61■□□□□ 0.73
ERCC1-213ENST00000592023 ATP5J2-PTCD1G3V325 749 aa19.61■□□□□ 0.73
ERCC1-213ENST00000592023 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
ERCC1-213ENST00000592023 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
ERCC1-213ENST00000592023 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
ERCC1-213ENST00000592023 SH3TC1Q8TE82 1336 aa19.6■□□□□ 0.73
ERCC1-213ENST00000592023 HCLS1P14317 486 aaPredicted RBP19.6■□□□□ 0.73
ERCC1-213ENST00000592023 HOXA10P31260 410 aaPredicted RBP19.6■□□□□ 0.73
ERCC1-213ENST00000592023 RIC3Q7Z5B4 369 aa19.6■□□□□ 0.73
ERCC1-213ENST00000592023 SYNE4Q8N205 404 aa19.6■□□□□ 0.73
ERCC1-213ENST00000592023 RBM17Q96I25 401 aaKnown RBP19.6■□□□□ 0.73
ERCC1-213ENST00000592023 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
ERCC1-213ENST00000592023 FKBP4Q02790 459 aaKnown RBP eCLIP19.59■□□□□ 0.73
ERCC1-213ENST00000592023 TWISTNBQ3B726 338 aaPredicted RBP19.59■□□□□ 0.73
ERCC1-213ENST00000592023 SLC10A5Q5PT55 438 aa19.59■□□□□ 0.73
ERCC1-213ENST00000592023 SLC51AQ86UW1 340 aa19.59■□□□□ 0.73
ERCC1-213ENST00000592023 ISCA1Q9BUE6 129 aa19.59■□□□□ 0.73
ERCC1-213ENST00000592023 SNED1Q8TER0 1413 aa19.59■□□□□ 0.73
ERCC1-213ENST00000592023 PPEF1O14829 653 aaPredicted RBP19.58■□□□□ 0.72
ERCC1-213ENST00000592023 CRAMP1Q96RY5 1269 aa19.58■□□□□ 0.72
ERCC1-213ENST00000592023 GLTPD2A6NH11 291 aa19.57■□□□□ 0.72
ERCC1-213ENST00000592023 WDR63Q8IWG1 891 aa19.57■□□□□ 0.72
ERCC1-213ENST00000592023 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
ERCC1-213ENST00000592023 STK31Q9BXU1 1019 aa19.57■□□□□ 0.72
ERCC1-213ENST00000592023 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
ERCC1-213ENST00000592023 RRAGCQ9HB90 399 aa19.57■□□□□ 0.72
ERCC1-213ENST00000592023 ZNF277Q9NRM2 450 aaPredicted RBP19.57■□□□□ 0.72
ERCC1-213ENST00000592023 ABCC4O15439 1325 aa19.56■□□□□ 0.72
ERCC1-213ENST00000592023 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-213ENST00000592023 C16orf71Q8IYS4 520 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-213ENST00000592023 FAM89AQ96GI7 184 aa19.56■□□□□ 0.72
ERCC1-213ENST00000592023 MYD88Q99836 296 aa19.56■□□□□ 0.72
ERCC1-213ENST00000592023 TOMM70O94826 608 aa19.55■□□□□ 0.72
ERCC1-213ENST00000592023 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
ERCC1-213ENST00000592023 WDR90Q96KV7 1748 aa19.55■□□□□ 0.72
ERCC1-213ENST00000592023 IARSP41252 1262 aaKnown RBP19.53■□□□□ 0.72
ERCC1-213ENST00000592023 CC2D2BQ6DHV5 1058 aa19.53■□□□□ 0.72
ERCC1-213ENST00000592023 DPY19L2Q6NUT2 758 aa19.53■□□□□ 0.72
ERCC1-213ENST00000592023 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
ERCC1-213ENST00000592023 MAP3K2Q9Y2U5 619 aa19.53■□□□□ 0.72
ERCC1-213ENST00000592023 TAF1P21675 1872 aa19.53■□□□□ 0.72
ERCC1-213ENST00000592023 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
ERCC1-213ENST00000592023 TRIM28Q13263 835 aaKnown RBP19.52■□□□□ 0.72
ERCC1-213ENST00000592023 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.72
ERCC1-213ENST00000592023 PSMD1Q99460 953 aa19.52■□□□□ 0.72
ERCC1-213ENST00000592023 METTL22Q9BUU2 404 aaPredicted RBP19.52■□□□□ 0.72
ERCC1-213ENST00000592023 G2E3Q7L622 706 aa19.51■□□□□ 0.71
ERCC1-213ENST00000592023 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
ERCC1-213ENST00000592023 COL4A1P02462 1669 aa19.51■□□□□ 0.71
ERCC1-213ENST00000592023 COL4A5P29400 1685 aa19.51■□□□□ 0.71
ERCC1-213ENST00000592023 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
ERCC1-213ENST00000592023 ZNF541Q9H0D2 1346 aa19.51■□□□□ 0.71
ERCC1-213ENST00000592023 PI4KAP2A4QPH2 592 aa19.5■□□□□ 0.71
ERCC1-213ENST00000592023 IRS4O14654 1257 aaPredicted RBP19.5■□□□□ 0.71
ERCC1-213ENST00000592023 DDNO94850 711 aaPredicted RBP19.5■□□□□ 0.71
ERCC1-213ENST00000592023 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
ERCC1-213ENST00000592023 HSPA6P17066 643 aa19.5■□□□□ 0.71
ERCC1-213ENST00000592023 GRAPQ13588 217 aa19.5■□□□□ 0.71
ERCC1-213ENST00000592023 KSR2Q6VAB6 950 aa19.5■□□□□ 0.71
ERCC1-213ENST00000592023 PI4KAP1Q8N8J0 262 aa19.5■□□□□ 0.71
ERCC1-213ENST00000592023 RBM46Q8TBY0 533 aaKnown RBP19.5■□□□□ 0.71
ERCC1-213ENST00000592023 GRAPLQ8TC17 118 aaPredicted RBP19.5■□□□□ 0.71
ERCC1-213ENST00000592023 TMX4Q9H1E5 349 aaPredicted RBP19.5■□□□□ 0.71
ERCC1-213ENST00000592023 ATP6V0A2Q9Y487 856 aa19.5■□□□□ 0.71
ERCC1-213ENST00000592023 VEGFAP15692 232 aaPredicted RBP19.49■□□□□ 0.71
ERCC1-213ENST00000592023 ZBTB38Q8NAP3 1195 aaPredicted RBP19.49■□□□□ 0.71
ERCC1-213ENST00000592023 CCDC191Q8NCU4 936 aa19.49■□□□□ 0.71
ERCC1-213ENST00000592023 CWC25Q9NXE8 425 aaPredicted RBP19.49■□□□□ 0.71
ERCC1-213ENST00000592023 VAMP4O75379 141 aa19.48■□□□□ 0.71
ERCC1-213ENST00000592023 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
ERCC1-213ENST00000592023 JARID2Q92833 1246 aaPredicted RBP19.48■□□□□ 0.71
ERCC1-213ENST00000592023 BBOX1O75936 387 aa19.47■□□□□ 0.71
ERCC1-213ENST00000592023 PCCAP05165 728 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms