RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZNF428Q96B54 188 aa12.9□□□□□ -0.34
BRCA1-227ENST00000591849 MYD88Q99836 296 aa12.9□□□□□ -0.34
BRCA1-227ENST00000591849 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-227ENST00000591849 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-227ENST00000591849 C21orf2O43822 256 aa12.89□□□□□ -0.35
BRCA1-227ENST00000591849 NTSR2O95665 410 aa12.89□□□□□ -0.35
BRCA1-227ENST00000591849 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
BRCA1-227ENST00000591849 RBM17Q96I25 401 aaKnown RBP12.89□□□□□ -0.35
BRCA1-227ENST00000591849 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-227ENST00000591849 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
BRCA1-227ENST00000591849 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
BRCA1-227ENST00000591849 KSR2Q6VAB6 950 aa12.88□□□□□ -0.35
BRCA1-227ENST00000591849 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
BRCA1-227ENST00000591849 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
BRCA1-227ENST00000591849 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
BRCA1-227ENST00000591849 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-227ENST00000591849 KLRG2A4D1S0 409 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-227ENST00000591849 PI4KAP2A4QPH2 592 aa12.87□□□□□ -0.35
BRCA1-227ENST00000591849 HCLS1P14317 486 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-227ENST00000591849 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
BRCA1-227ENST00000591849 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-227ENST00000591849 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-227ENST00000591849 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
BRCA1-227ENST00000591849 PI4KAP1Q8N8J0 262 aa12.87□□□□□ -0.35
BRCA1-227ENST00000591849 ISCA1Q9BUE6 129 aa12.87□□□□□ -0.35
BRCA1-227ENST00000591849 METTL22Q9BUU2 404 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-227ENST00000591849 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
BRCA1-227ENST00000591849 BCORQ6W2J9 1755 aa12.86□□□□□ -0.35
BRCA1-227ENST00000591849 AFDNP55196 1824 aaKnown RBP12.86□□□□□ -0.35
BRCA1-227ENST00000591849 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
BRCA1-227ENST00000591849 FLIIQ13045 1269 aa12.86□□□□□ -0.35
BRCA1-227ENST00000591849 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
BRCA1-227ENST00000591849 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
BRCA1-227ENST00000591849 G2E3Q7L622 706 aa12.86□□□□□ -0.35
BRCA1-227ENST00000591849 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
BRCA1-227ENST00000591849 CWC25Q9NXE8 425 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-227ENST00000591849 ZNF521Q96K83 1311 aa12.86□□□□□ -0.35
BRCA1-227ENST00000591849 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 DLEC1Q9Y238 1755 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 RASSF7Q02833 373 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
BRCA1-227ENST00000591849 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-227ENST00000591849 NRXN2Q9P2S2 1712 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 SBF1O95248 1867 aa12.85□□□□□ -0.35
BRCA1-227ENST00000591849 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-227ENST00000591849 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
BRCA1-227ENST00000591849 CRY2Q49AN0 593 aa12.84□□□□□ -0.35
BRCA1-227ENST00000591849 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
BRCA1-227ENST00000591849 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
BRCA1-227ENST00000591849 LMNB1P20700 586 aa12.83□□□□□ -0.36
BRCA1-227ENST00000591849 HOXA10P31260 410 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-227ENST00000591849 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
BRCA1-227ENST00000591849 ZBTB38Q8NAP3 1195 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-227ENST00000591849 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
BRCA1-227ENST00000591849 TAOK3Q9H2K8 898 aa12.83□□□□□ -0.36
BRCA1-227ENST00000591849 TNRC6CQ9HCJ0 1690 aaKnown RBP12.83□□□□□ -0.36
BRCA1-227ENST00000591849 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-227ENST00000591849 PCCAP05165 728 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-227ENST00000591849 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
BRCA1-227ENST00000591849 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
BRCA1-227ENST00000591849 JARID2Q92833 1246 aaPredicted RBP12.82□□□□□ -0.36
BRCA1-227ENST00000591849 NUP98P52948 1817 aa12.81□□□□□ -0.36
BRCA1-227ENST00000591849 BBOX1O75936 387 aa12.81□□□□□ -0.36
BRCA1-227ENST00000591849 HSPA6P17066 643 aa12.81□□□□□ -0.36
BRCA1-227ENST00000591849 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
BRCA1-227ENST00000591849 SLC4A10Q6U841 1118 aa12.81□□□□□ -0.36
BRCA1-227ENST00000591849 RIC1Q4ADV7 1423 aa12.8□□□□□ -0.36
BRCA1-227ENST00000591849 NFKBIEO00221 500 aa12.8□□□□□ -0.36
BRCA1-227ENST00000591849 PDE8AO60658 829 aa12.8□□□□□ -0.36
BRCA1-227ENST00000591849 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
BRCA1-227ENST00000591849 LINS1Q8NG48 757 aa12.8□□□□□ -0.36
BRCA1-227ENST00000591849 C7orf43Q8WVR3 580 aa12.8□□□□□ -0.36
BRCA1-227ENST00000591849 WDR90Q96KV7 1748 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 F6X3S4 739 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 IGKV5-2P06315 115 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRCA1-227ENST00000591849 GRAPQ13588 217 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 SF3B3Q15393 1217 aaKnown RBP12.79□□□□□ -0.36
BRCA1-227ENST00000591849 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 DPY19L2Q6NUT2 758 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 OLFM4Q6UX06 510 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 GRAPLQ8TC17 118 aaPredicted RBP12.79□□□□□ -0.36
BRCA1-227ENST00000591849 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
BRCA1-227ENST00000591849 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 KIF3CO14782 793 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-227ENST00000591849 UBE3BQ7Z3V4 1068 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
BRCA1-227ENST00000591849 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-227ENST00000591849 BCL2L13Q9BXK5 485 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 ZNF277Q9NRM2 450 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-227ENST00000591849 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 ABCC4O15439 1325 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
BRCA1-227ENST00000591849 LTBP3Q9NS15 1303 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms