RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ZAP70P43403 619 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 ARSDP51689 593 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 CTBSQ01459 385 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 SF3B2Q13435 895 aaKnown RBP6.35□□□□□ -1.39
VMP1-212ENST00000591782 GRIN2CQ14957 1233 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 ATCAYQ86WG3 371 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 CNTNAP3BQ96NU0 1288 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 CNTNAP3Q9BZ76 1288 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 MARK1Q9P0L2 795 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 USP20Q9Y2K6 914 aa6.35□□□□□ -1.39
VMP1-212ENST00000591782 NPR3P17342 541 aa6.34□□□□□ -1.39
VMP1-212ENST00000591782 EIF1AXP47813 144 aaKnown RBP6.34□□□□□ -1.39
VMP1-212ENST00000591782 KCNQ4P56696 695 aa6.34□□□□□ -1.39
VMP1-212ENST00000591782 LAMC2Q13753 1193 aa6.34□□□□□ -1.39
VMP1-212ENST00000591782 GLYCTKQ8IVS8 523 aa6.34□□□□□ -1.39
VMP1-212ENST00000591782 RGL4Q8IZJ4 473 aa6.34□□□□□ -1.39
VMP1-212ENST00000591782 MBIPQ9NS73 344 aa6.34□□□□□ -1.39
VMP1-212ENST00000591782 SOWAHDA6NJG2 315 aa6.33□□□□□ -1.4
VMP1-212ENST00000591782 PATL2C9JE40 543 aaKnown RBP6.33□□□□□ -1.4
VMP1-212ENST00000591782 FAM13AO94988 1023 aa6.33□□□□□ -1.4
VMP1-212ENST00000591782 ECM1Q16610 540 aa6.33□□□□□ -1.4
VMP1-212ENST00000591782 NOM1Q5C9Z4 860 aaKnown RBP6.33□□□□□ -1.4
VMP1-212ENST00000591782 KCNH4Q9UQ05 1017 aa6.33□□□□□ -1.4
VMP1-212ENST00000591782 RTCBQ9Y3I0 505 aaKnown RBP6.33□□□□□ -1.4
VMP1-212ENST00000591782 C2CD2LO14523 706 aa6.32□□□□□ -1.4
VMP1-212ENST00000591782 BMP4P12644 408 aa6.32□□□□□ -1.4
VMP1-212ENST00000591782 EPB42P16452 691 aa6.32□□□□□ -1.4
VMP1-212ENST00000591782 FAM182BQ5T319 152 aa6.32□□□□□ -1.4
VMP1-212ENST00000591782 GPR152Q8TDT2 470 aa6.32□□□□□ -1.4
VMP1-212ENST00000591782 SLC30A3Q99726 388 aa6.32□□□□□ -1.4
VMP1-212ENST00000591782 IGF1RP08069 1367 aa6.31□□□□□ -1.4
VMP1-212ENST00000591782 SRSF11Q05519 484 aaKnown RBP6.31□□□□□ -1.4
VMP1-212ENST00000591782 AAMPQ13685 434 aa6.31□□□□□ -1.4
VMP1-212ENST00000591782 ALKBH2Q6NS38 261 aa6.31□□□□□ -1.4
VMP1-212ENST00000591782 RAB44Q7Z6P3 723 aaPredicted RBP6.31□□□□□ -1.4
VMP1-212ENST00000591782 CMTR1Q8N1G2 835 aaKnown RBP6.31□□□□□ -1.4
VMP1-212ENST00000591782 EDEM1Q92611 657 aa6.31□□□□□ -1.4
VMP1-212ENST00000591782 KCNMB2Q9Y691 235 aa6.31□□□□□ -1.4
VMP1-212ENST00000591782 FZD6O60353 706 aa6.3□□□□□ -1.4
VMP1-212ENST00000591782 ADAMTS2O95450 1211 aa6.3□□□□□ -1.4
VMP1-212ENST00000591782 ARHGAP4P98171 946 aa6.3□□□□□ -1.4
VMP1-212ENST00000591782 DNM1Q05193 864 aaKnown RBP6.3□□□□□ -1.4
VMP1-212ENST00000591782 SPEM2Q0P670 501 aa6.3□□□□□ -1.4
VMP1-212ENST00000591782 PIK3R5Q8WYR1 880 aa6.3□□□□□ -1.4
VMP1-212ENST00000591782 NUDT16Q96DE0 195 aaKnown RBP6.3□□□□□ -1.4
VMP1-212ENST00000591782 GSX2Q9BZM3 304 aa6.3□□□□□ -1.4
VMP1-212ENST00000591782 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
VMP1-212ENST00000591782 BIN2Q9UBW5 565 aaPredicted RBP6.3□□□□□ -1.4
VMP1-212ENST00000591782 NSFL1CQ9UNZ2 370 aaKnown RBP6.3□□□□□ -1.4
VMP1-212ENST00000591782 PDGFAP04085 211 aa6.29□□□□□ -1.4
VMP1-212ENST00000591782 MAP2K3P46734 347 aa6.29□□□□□ -1.4
VMP1-212ENST00000591782 TRIP4Q15650 581 aaPredicted RBP6.29□□□□□ -1.4
VMP1-212ENST00000591782 CCDC87Q9NVE4 849 aa6.29□□□□□ -1.4
VMP1-212ENST00000591782 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
VMP1-212ENST00000591782 POLIQ9UNA4 740 aa6.29□□□□□ -1.4
VMP1-212ENST00000591782 WIPF1O43516 503 aa6.28□□□□□ -1.4
VMP1-212ENST00000591782 XYLBO75191 536 aa6.28□□□□□ -1.4
VMP1-212ENST00000591782 SLURP2P0DP57 97 aa6.28□□□□□ -1.4
VMP1-212ENST00000591782 MZF1P28698 734 aaPredicted RBP6.28□□□□□ -1.4
VMP1-212ENST00000591782 CCINQ13939 588 aa6.28□□□□□ -1.4
VMP1-212ENST00000591782 ZNF468Q5VIY5 522 aaPredicted RBP6.28□□□□□ -1.4
VMP1-212ENST00000591782 KRT25Q7Z3Z0 450 aa6.28□□□□□ -1.4
VMP1-212ENST00000591782 BHMTQ93088 406 aa6.28□□□□□ -1.4
VMP1-212ENST00000591782 A6NHS1 94 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 UBAP1LF5GYI3 381 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 SASH3O75995 380 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 EGFRP00533 1210 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 ARAFP10398 606 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 TARSP26639 723 aaKnown RBP6.27□□□□□ -1.41
VMP1-212ENST00000591782 PCBP4P57723 403 aaKnown RBP6.27□□□□□ -1.41
VMP1-212ENST00000591782 SYT9Q86SS6 491 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 ACDQ96AP0 544 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 PNMA5Q96PV4 448 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
VMP1-212ENST00000591782 ZFATQ9P243 1243 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 KLF15Q9UIH9 416 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 GGA1Q9UJY5 639 aa6.27□□□□□ -1.41
VMP1-212ENST00000591782 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.27□□□□□ -1.41
VMP1-212ENST00000591782 NEURL1BA8MQ27 555 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 PCSK2P16519 638 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 NFKB1P19838 968 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 NEUROD1Q13562 356 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 C8orf34Q49A92 452 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 GZF1Q9H116 711 aaPredicted RBP6.26□□□□□ -1.41
VMP1-212ENST00000591782 GGNBP2Q9H3C7 697 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 C11orf16Q9NQ32 467 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 AVENQ9NQS1 362 aaPredicted RBP6.26□□□□□ -1.41
VMP1-212ENST00000591782 BRPF3Q9ULD4 1205 aa6.26□□□□□ -1.41
VMP1-212ENST00000591782 ZBTB7CA1YPR0 619 aa6.25□□□□□ -1.41
VMP1-212ENST00000591782 NDUFB5O43674 189 aa6.25□□□□□ -1.41
VMP1-212ENST00000591782 RARAP10276 462 aa6.25□□□□□ -1.41
VMP1-212ENST00000591782 ADH6P28332 368 aa6.25□□□□□ -1.41
VMP1-212ENST00000591782 C1orf229Q6ZS94 237 aaPredicted RBP6.25□□□□□ -1.41
VMP1-212ENST00000591782 SND1Q7KZF4 910 aaKnown RBP eCLIP6.25□□□□□ -1.41
VMP1-212ENST00000591782 FCHSD1Q86WN1 690 aa6.25□□□□□ -1.41
VMP1-212ENST00000591782 WHAMMQ8TF30 809 aa6.25□□□□□ -1.41
VMP1-212ENST00000591782 EFCC1Q9HA90 598 aa6.25□□□□□ -1.41
VMP1-212ENST00000591782 FNDC3AQ9Y2H6 1198 aaKnown RBP6.25□□□□□ -1.41
VMP1-212ENST00000591782 SIN3BO75182 1162 aa6.24□□□□□ -1.41
VMP1-212ENST00000591782 RPLP1P05386 114 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms