RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 GTF2E1P29083 439 aaPredicted RBP22.66■■□□□ 1.22
POLR2E-208ENST00000591709 EPS15P42566 896 aa22.66■■□□□ 1.22
POLR2E-208ENST00000591709 RGS19P49795 217 aa22.66■■□□□ 1.22
POLR2E-208ENST00000591709 CFAP44Q96MT7 982 aa22.66■■□□□ 1.22
POLR2E-208ENST00000591709 NBPF26B4DH59 902 aa22.65■■□□□ 1.22
POLR2E-208ENST00000591709 NBPF10Q6P3W6 841 aaKnown RBP22.65■■□□□ 1.22
POLR2E-208ENST00000591709 NBPF15Q8N660 670 aa22.65■■□□□ 1.22
POLR2E-208ENST00000591709 KDM3BQ7LBC6 1761 aa22.64■■□□□ 1.22
POLR2E-208ENST00000591709 AOC2O75106 756 aa22.64■■□□□ 1.21
POLR2E-208ENST00000591709 SNRPA1P09661 255 aaKnown RBP22.64■■□□□ 1.21
POLR2E-208ENST00000591709 CNGB1Q14028 1251 aaPredicted RBP22.64■■□□□ 1.21
POLR2E-208ENST00000591709 HLFQ16534 295 aa22.64■■□□□ 1.21
POLR2E-208ENST00000591709 CST9Q5W186 159 aa22.64■■□□□ 1.21
POLR2E-208ENST00000591709 PHACTR3Q96KR7 559 aa22.64■■□□□ 1.21
POLR2E-208ENST00000591709 TLL2Q9Y6L7 1015 aa22.64■■□□□ 1.21
POLR2E-208ENST00000591709 LAMB2P55268 1798 aa22.63■■□□□ 1.21
POLR2E-208ENST00000591709 SLC51AQ86UW1 340 aa22.63■■□□□ 1.21
POLR2E-208ENST00000591709 NUTM1Q86Y26 1132 aa22.63■■□□□ 1.21
POLR2E-208ENST00000591709 LARGE2Q8N3Y3 721 aa22.63■■□□□ 1.21
POLR2E-208ENST00000591709 TNRC18O15417 2968 aaPredicted RBP22.62■■□□□ 1.21
POLR2E-208ENST00000591709 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
POLR2E-208ENST00000591709 CRY2Q49AN0 593 aa22.62■■□□□ 1.21
POLR2E-208ENST00000591709 RGL2O15211 777 aa22.61■■□□□ 1.21
POLR2E-208ENST00000591709 PER1O15534 1290 aaPredicted RBP22.61■■□□□ 1.21
POLR2E-208ENST00000591709 RIC1Q4ADV7 1423 aa22.61■■□□□ 1.21
POLR2E-208ENST00000591709 USP50Q70EL3 339 aaPredicted RBP22.61■■□□□ 1.21
POLR2E-208ENST00000591709 MCOLN1Q9GZU1 580 aa22.61■■□□□ 1.21
POLR2E-208ENST00000591709 POLR2AP24928 1970 aaKnown RBP22.61■■□□□ 1.21
POLR2E-208ENST00000591709 CC2D2BQ6DHV5 1058 aa22.6■■□□□ 1.21
POLR2E-208ENST00000591709 MCM10Q7L590 875 aa22.6■■□□□ 1.21
POLR2E-208ENST00000591709 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
POLR2E-208ENST00000591709 RSPH6AQ9H0K4 717 aa22.59■■□□□ 1.21
POLR2E-208ENST00000591709 PCDH10Q9P2E7 1040 aa22.59■■□□□ 1.21
POLR2E-208ENST00000591709 AKAP11Q9UKA4 1901 aa22.59■■□□□ 1.21
POLR2E-208ENST00000591709 TCERG1O14776 1098 aaKnown RBP22.58■■□□□ 1.21
POLR2E-208ENST00000591709 MAP2K2P36507 400 aa22.58■■□□□ 1.21
POLR2E-208ENST00000591709 NIM1KQ8IY84 436 aa22.58■■□□□ 1.21
POLR2E-208ENST00000591709 NYXQ9GZU5 481 aa22.58■■□□□ 1.21
POLR2E-208ENST00000591709 TAF1P21675 1872 aa22.57■■□□□ 1.2
POLR2E-208ENST00000591709 ANKRD36CQ5JPF3 1778 aa22.56■■□□□ 1.2
POLR2E-208ENST00000591709 CELF2O95319 508 aaKnown RBP22.56■■□□□ 1.2
POLR2E-208ENST00000591709 SAPCD2Q86UD0 394 aa22.56■■□□□ 1.2
POLR2E-208ENST00000591709 NGEFQ8N5V2 710 aa22.56■■□□□ 1.2
POLR2E-208ENST00000591709 RTF1Q92541 710 aaKnown RBP22.56■■□□□ 1.2
POLR2E-208ENST00000591709 PPEF1O14829 653 aaPredicted RBP22.55■■□□□ 1.2
POLR2E-208ENST00000591709 PPIP5K2O43314 1243 aa22.55■■□□□ 1.2
POLR2E-208ENST00000591709 DCTN1Q14203 1278 aa22.55■■□□□ 1.2
POLR2E-208ENST00000591709 ADARB2Q9NS39 739 aaKnown RBP22.55■■□□□ 1.2
POLR2E-208ENST00000591709 GPRC5DQ9NZD1 345 aa22.55■■□□□ 1.2
POLR2E-208ENST00000591709 CA12O43570 354 aa22.54■■□□□ 1.2
POLR2E-208ENST00000591709 HOXA10P31260 410 aaPredicted RBP22.54■■□□□ 1.2
POLR2E-208ENST00000591709 DGKZQ13574 1117 aa22.54■■□□□ 1.2
POLR2E-208ENST00000591709 AOC3Q16853 763 aa22.54■■□□□ 1.2
POLR2E-208ENST00000591709 GLIS2Q9BZE0 524 aaPredicted RBP22.54■■□□□ 1.2
POLR2E-208ENST00000591709 UBN2Q6ZU65 1347 aa22.54■■□□□ 1.2
POLR2E-208ENST00000591709 IBTKQ9P2D0 1353 aaPredicted RBP22.53■■□□□ 1.2
POLR2E-208ENST00000591709 GPTP24298 496 aa22.53■■□□□ 1.2
POLR2E-208ENST00000591709 BRPF1P55201 1214 aaPredicted RBP22.53■■□□□ 1.2
POLR2E-208ENST00000591709 ZNF408Q9H9D4 720 aa22.53■■□□□ 1.2
POLR2E-208ENST00000591709 NPC1L1Q9UHC9 1359 aa22.52■■□□□ 1.2
POLR2E-208ENST00000591709 GRIPAP1Q4V328 841 aa22.52■■□□□ 1.2
POLR2E-208ENST00000591709 MAP3K15Q6ZN16 1313 aa22.52■■□□□ 1.2
POLR2E-208ENST00000591709 CIAPIN1Q6FI81 312 aa22.51■■□□□ 1.19
POLR2E-208ENST00000591709 RBM17Q96I25 401 aaKnown RBP22.51■■□□□ 1.19
POLR2E-208ENST00000591709 TTLL7Q6ZT98 887 aa22.5■■□□□ 1.19
POLR2E-208ENST00000591709 C3orf67Q6ZVT6 689 aa22.5■■□□□ 1.19
POLR2E-208ENST00000591709 CRAMP1Q96RY5 1269 aa22.5■■□□□ 1.19
POLR2E-208ENST00000591709 ERVV-1B6SEH8 477 aa22.49■■□□□ 1.19
POLR2E-208ENST00000591709 GMPSP49915 693 aaPredicted RBP22.49■■□□□ 1.19
POLR2E-208ENST00000591709 CXCL9Q07325 125 aa22.49■■□□□ 1.19
POLR2E-208ENST00000591709 KIF6Q6ZMV9 814 aa22.49■■□□□ 1.19
POLR2E-208ENST00000591709 HHIPL1Q96JK4 782 aa22.49■■□□□ 1.19
POLR2E-208ENST00000591709 ZBTB3Q9H5J0 574 aa22.49■■□□□ 1.19
POLR2E-208ENST00000591709 MIS18AQ9NYP9 233 aa22.49■■□□□ 1.19
POLR2E-208ENST00000591709 SUSD4Q5VX71 490 aa22.48■■□□□ 1.19
POLR2E-208ENST00000591709 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
POLR2E-208ENST00000591709 NTSR2O95665 410 aa22.47■■□□□ 1.19
POLR2E-208ENST00000591709 ZIC5Q96T25 663 aa22.47■■□□□ 1.19
POLR2E-208ENST00000591709 ZNRF3Q9ULT6 936 aa22.47■■□□□ 1.19
POLR2E-208ENST00000591709 RRP7AQ9Y3A4 280 aaKnown RBP22.47■■□□□ 1.19
POLR2E-208ENST00000591709 LRRC37AA6NMS7 1700 aa22.46■■□□□ 1.19
POLR2E-208ENST00000591709 U2AF1L5P0DN76 240 aaPredicted RBP22.46■■□□□ 1.19
POLR2E-208ENST00000591709 U2AF1Q01081 240 aaKnown RBP eCLIP22.46■■□□□ 1.19
POLR2E-208ENST00000591709 MYL6BP14649 208 aa22.45■■□□□ 1.18
POLR2E-208ENST00000591709 TAF7Q15545 349 aaPredicted RBP22.45■■□□□ 1.18
POLR2E-208ENST00000591709 TRPM4Q8TD43 1214 aa22.45■■□□□ 1.18
POLR2E-208ENST00000591709 TMX4Q9H1E5 349 aaPredicted RBP22.45■■□□□ 1.18
POLR2E-208ENST00000591709 NUDCQ9Y266 331 aa22.45■■□□□ 1.18
POLR2E-208ENST00000591709 DDX60Q8IY21 1712 aaKnown RBP22.45■■□□□ 1.18
POLR2E-208ENST00000591709 ABCC4O15439 1325 aa22.44■■□□□ 1.18
POLR2E-208ENST00000591709 HIRAP54198 1017 aaPredicted RBP22.44■■□□□ 1.18
POLR2E-208ENST00000591709 BCL2L13Q9BXK5 485 aa22.44■■□□□ 1.18
POLR2E-208ENST00000591709 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
POLR2E-208ENST00000591709 DUOX1Q9NRD9 1551 aa22.44■■□□□ 1.18
POLR2E-208ENST00000591709 ATP6V0A2Q9Y487 856 aa22.44■■□□□ 1.18
POLR2E-208ENST00000591709 NOGQ13253 232 aa22.43■■□□□ 1.18
POLR2E-208ENST00000591709 PGAP2Q9UHJ9 254 aa22.43■■□□□ 1.18
POLR2E-208ENST00000591709 SHTN1A0MZ66 631 aa22.42■■□□□ 1.18
POLR2E-208ENST00000591709 HTATSF1O43719 755 aaKnown RBP22.42■■□□□ 1.18
POLR2E-208ENST00000591709 RAD17O75943 681 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms