RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 SLC10A5Q5PT55 438 aa21.12■□□□□ 0.97
CIRBP-233ENST00000591622 RIC3Q7Z5B4 369 aa21.12■□□□□ 0.97
CIRBP-233ENST00000591622 ISCA1Q9BUE6 129 aa21.12■□□□□ 0.97
CIRBP-233ENST00000591622 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
CIRBP-233ENST00000591622 ZNF219Q9P2Y4 722 aaPredicted RBP21.12■□□□□ 0.97
CIRBP-233ENST00000591622 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
CIRBP-233ENST00000591622 EXOSC9Q06265 439 aaKnown RBP21.11■□□□□ 0.97
CIRBP-233ENST00000591622 C9orf131Q5VYM1 1079 aa21.11■□□□□ 0.97
CIRBP-233ENST00000591622 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
CIRBP-233ENST00000591622 TRMT112Q9UI30 125 aaKnown RBP21.11■□□□□ 0.97
CIRBP-233ENST00000591622 TNRC6CQ9HCJ0 1690 aaKnown RBP21.1■□□□□ 0.97
CIRBP-233ENST00000591622 TCERG1O14776 1098 aaKnown RBP21.1■□□□□ 0.97
CIRBP-233ENST00000591622 ATP5J2-PTCD1G3V325 749 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 NFKBIEO00221 500 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 VAMP4O75379 141 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
CIRBP-233ENST00000591622 HOXA10P31260 410 aaPredicted RBP21.09■□□□□ 0.97
CIRBP-233ENST00000591622 RASSF7Q02833 373 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 TRIM28Q13263 835 aaKnown RBP21.09■□□□□ 0.97
CIRBP-233ENST00000591622 SOGA3Q5TF21 947 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 C7orf43Q8WVR3 580 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 RPGRQ92834 1020 aaKnown RBP21.09■□□□□ 0.97
CIRBP-233ENST00000591622 NLRP3Q96P20 1036 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 ANKRD36CQ5JPF3 1778 aa21.09■□□□□ 0.97
CIRBP-233ENST00000591622 SH3TC1Q8TE82 1336 aa21.08■□□□□ 0.97
CIRBP-233ENST00000591622 SLC4A2P04920 1241 aa21.08■□□□□ 0.97
CIRBP-233ENST00000591622 C3orf67Q6ZVT6 689 aa21.08■□□□□ 0.97
CIRBP-233ENST00000591622 RNF181Q9P0P0 153 aa21.08■□□□□ 0.97
CIRBP-233ENST00000591622 LMNB1P20700 586 aa21.07■□□□□ 0.96
CIRBP-233ENST00000591622 SYNE4Q8N205 404 aa21.07■□□□□ 0.96
CIRBP-233ENST00000591622 PRELPP51888 382 aa21.06■□□□□ 0.96
CIRBP-233ENST00000591622 ZNF526Q8TF50 670 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-233ENST00000591622 ZNF428Q96B54 188 aa21.06■□□□□ 0.96
CIRBP-233ENST00000591622 GPBP1L1Q9HC44 474 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-233ENST00000591622 SLX4Q8IY92 1834 aa21.06■□□□□ 0.96
CIRBP-233ENST00000591622 HCLS1P14317 486 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-233ENST00000591622 KSR2Q6VAB6 950 aa21.05■□□□□ 0.96
CIRBP-233ENST00000591622 G2E3Q7L622 706 aa21.05■□□□□ 0.96
CIRBP-233ENST00000591622 MIER1Q8N108 512 aa21.05■□□□□ 0.96
CIRBP-233ENST00000591622 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
CIRBP-233ENST00000591622 CRAMP1Q96RY5 1269 aa21.05■□□□□ 0.96
CIRBP-233ENST00000591622 MYD88Q99836 296 aa21.05■□□□□ 0.96
CIRBP-233ENST00000591622 METTL22Q9BUU2 404 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-233ENST00000591622 MAP3K2Q9Y2U5 619 aa21.05■□□□□ 0.96
CIRBP-233ENST00000591622 ARFGEF2Q9Y6D5 1785 aa21.05■□□□□ 0.96
CIRBP-233ENST00000591622 LTBP3Q9NS15 1303 aa21.04■□□□□ 0.96
CIRBP-233ENST00000591622 PI4KAP2A4QPH2 592 aa21.04■□□□□ 0.96
CIRBP-233ENST00000591622 CCDC93Q567U6 631 aa21.04■□□□□ 0.96
CIRBP-233ENST00000591622 PI4KAP1Q8N8J0 262 aa21.04■□□□□ 0.96
CIRBP-233ENST00000591622 FAM89AQ96GI7 184 aa21.04■□□□□ 0.96
CIRBP-233ENST00000591622 TAOK3Q9H2K8 898 aa21.04■□□□□ 0.96
CIRBP-233ENST00000591622 CCDC191Q8NCU4 936 aa21.03■□□□□ 0.96
CIRBP-233ENST00000591622 E9PSI1 815 aa21.02■□□□□ 0.96
CIRBP-233ENST00000591622 OLFM4Q6UX06 510 aa21.02■□□□□ 0.96
CIRBP-233ENST00000591622 ZC3H4Q9UPT8 1303 aaKnown RBP21.02■□□□□ 0.95
CIRBP-233ENST00000591622 FLIIQ13045 1269 aa21.01■□□□□ 0.95
CIRBP-233ENST00000591622 RTKN2Q8IZC4 609 aa21.01■□□□□ 0.95
CIRBP-233ENST00000591622 ZBTB38Q8NAP3 1195 aaPredicted RBP21.01■□□□□ 0.95
CIRBP-233ENST00000591622 RTL5Q5HYW3 569 aaPredicted RBP21■□□□□ 0.95
CIRBP-233ENST00000591622 CC2D2BQ6DHV5 1058 aa21■□□□□ 0.95
CIRBP-233ENST00000591622 CWC25Q9NXE8 425 aaPredicted RBP21■□□□□ 0.95
CIRBP-233ENST00000591622 CACNA1SQ13698 1873 aa20.99■□□□□ 0.95
CIRBP-233ENST00000591622 IRS4O14654 1257 aaPredicted RBP20.99■□□□□ 0.95
CIRBP-233ENST00000591622 FKBP4Q02790 459 aaKnown RBP eCLIP20.99■□□□□ 0.95
CIRBP-233ENST00000591622 SLFN5Q08AF3 891 aa20.99■□□□□ 0.95
CIRBP-233ENST00000591622 NEXNQ0ZGT2 675 aa20.99■□□□□ 0.95
CIRBP-233ENST00000591622 FER1L6Q2WGJ9 1857 aa20.98■□□□□ 0.95
CIRBP-233ENST00000591622 PPEF1O14829 653 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-233ENST00000591622 PCCAP05165 728 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-233ENST00000591622 IGKV5-2P06315 115 aa20.98■□□□□ 0.95
CIRBP-233ENST00000591622 FKBP5Q13451 457 aaPredicted RBP20.98■□□□□ 0.95
CIRBP-233ENST00000591622 SF3B3Q15393 1217 aaKnown RBP20.98■□□□□ 0.95
CIRBP-233ENST00000591622 DDX46Q7L014 1031 aaKnown RBP20.98■□□□□ 0.95
CIRBP-233ENST00000591622 SBF1O95248 1867 aa20.98■□□□□ 0.95
CIRBP-233ENST00000591622 ABCC4O15439 1325 aa20.98■□□□□ 0.95
CIRBP-233ENST00000591622 HSP90B1P14625 803 aaKnown RBP20.97■□□□□ 0.95
CIRBP-233ENST00000591622 GRIPAP1Q4V328 841 aa20.97■□□□□ 0.95
CIRBP-233ENST00000591622 KDM2BQ8NHM5 1336 aa20.97■□□□□ 0.95
CIRBP-233ENST00000591622 SNED1Q8TER0 1413 aa20.96■□□□□ 0.95
CIRBP-233ENST00000591622 BBOX1O75936 387 aa20.96■□□□□ 0.95
CIRBP-233ENST00000591622 CDCA7LQ96GN5 454 aa20.96■□□□□ 0.95
CIRBP-233ENST00000591622 ATP6V0A2Q9Y487 856 aa20.96■□□□□ 0.95
CIRBP-233ENST00000591622 CWF19L2Q2TBE0 894 aaKnown RBP20.95■□□□□ 0.94
CIRBP-233ENST00000591622 DNAAF4Q8WXU2 420 aa20.95■□□□□ 0.94
CIRBP-233ENST00000591622 PSMD1Q99460 953 aa20.95■□□□□ 0.94
CIRBP-233ENST00000591622 NEURL1BA8MQ27 555 aa20.94■□□□□ 0.94
CIRBP-233ENST00000591622 GRAPQ13588 217 aa20.94■□□□□ 0.94
CIRBP-233ENST00000591622 TRMT2AQ8IZ69 625 aaKnown RBP20.94■□□□□ 0.94
CIRBP-233ENST00000591622 GRAPLQ8TC17 118 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-233ENST00000591622 JARID2Q92833 1246 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-233ENST00000591622 TMX4Q9H1E5 349 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-233ENST00000591622 NMRK2Q9NPI5 230 aa20.94■□□□□ 0.94
CIRBP-233ENST00000591622 ZNF277Q9NRM2 450 aaPredicted RBP20.94■□□□□ 0.94
CIRBP-233ENST00000591622 DDX60Q8IY21 1712 aaKnown RBP20.94■□□□□ 0.94
CIRBP-233ENST00000591622 LAMB2P55268 1798 aa20.93■□□□□ 0.94
CIRBP-233ENST00000591622 GLTPD2A6NH11 291 aa20.93■□□□□ 0.94
CIRBP-233ENST00000591622 KIF3CO14782 793 aa20.93■□□□□ 0.94
CIRBP-233ENST00000591622 C1QTNF8P60827 252 aa20.93■□□□□ 0.94
CIRBP-233ENST00000591622 SLC51AQ86UW1 340 aa20.93■□□□□ 0.94
CIRBP-233ENST00000591622 CDHR2Q9BYE9 1310 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms