RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TEFQ10587 303 aa8.39□□□□□ -1.07
VPS4B-205ENST00000591383 DCTN1Q14203 1278 aa8.39□□□□□ -1.07
VPS4B-205ENST00000591383 THUMPD2Q9BTF0 503 aaKnown RBP8.39□□□□□ -1.07
VPS4B-205ENST00000591383 FAM198AQ9UFP1 575 aa8.39□□□□□ -1.07
VPS4B-205ENST00000591383 ZNF330Q9Y3S2 320 aaPredicted RBP8.39□□□□□ -1.07
VPS4B-205ENST00000591383 LAMB4A4D0S4 1761 aa8.39□□□□□ -1.07
VPS4B-205ENST00000591383 PALLDQ8WX93 1383 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 TJP1Q07157 1748 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 RCCD1A6NED2 376 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 RNMTO43148 476 aaKnown RBP8.38□□□□□ -1.07
VPS4B-205ENST00000591383 APBA3O96018 575 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 NUDT7P0C024 238 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 CD46P15529 392 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 TMPOP42166 694 aaKnown RBP8.38□□□□□ -1.07
VPS4B-205ENST00000591383 RIPK4P57078 832 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 TUSC1Q2TAM9 212 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 KHSRPQ92945 711 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS4B-205ENST00000591383 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
VPS4B-205ENST00000591383 KCPQ6ZWJ8 1503 aa8.38□□□□□ -1.07
VPS4B-205ENST00000591383 CEMIPQ8WUJ3 1361 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 ERVV-2B6SEH9 535 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 SPTLC1O15269 473 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 DEFB132Q7Z7B7 95 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 MTMR14Q8NCE2 650 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 SLC52A2Q9HAB3 445 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 LGR6Q9HBX8 967 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 TAF1LQ8IZX4 1826 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 TUBGCP6Q96RT7 1819 aa8.37□□□□□ -1.07
VPS4B-205ENST00000591383 COL5A3P25940 1745 aaPredicted RBP8.37□□□□□ -1.07
VPS4B-205ENST00000591383 CICQ96RK0 1608 aaPredicted RBP8.36□□□□□ -1.07
VPS4B-205ENST00000591383 SOCS7O14512 581 aa8.36□□□□□ -1.07
VPS4B-205ENST00000591383 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
VPS4B-205ENST00000591383 PIGBQ92521 554 aa8.36□□□□□ -1.07
VPS4B-205ENST00000591383 TRAIPQ9BWF2 469 aa8.36□□□□□ -1.07
VPS4B-205ENST00000591383 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
VPS4B-205ENST00000591383 C4BP0C0L5 1744 aa8.35□□□□□ -1.07
VPS4B-205ENST00000591383 COL9A1P20849 921 aa8.35□□□□□ -1.07
VPS4B-205ENST00000591383 RSBN1LQ6PCB5 846 aaPredicted RBP8.35□□□□□ -1.07
VPS4B-205ENST00000591383 TTC5Q8N0Z6 440 aa8.35□□□□□ -1.07
VPS4B-205ENST00000591383 NFATC2IPQ8NCF5 419 aa8.35□□□□□ -1.07
VPS4B-205ENST00000591383 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
VPS4B-205ENST00000591383 ASAP1Q9ULH1 1129 aa8.35□□□□□ -1.07
VPS4B-205ENST00000591383 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
VPS4B-205ENST00000591383 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.07
VPS4B-205ENST00000591383 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
VPS4B-205ENST00000591383 HTATSF1O43719 755 aaKnown RBP8.34□□□□□ -1.07
VPS4B-205ENST00000591383 PTCD1O75127 700 aaKnown RBP8.34□□□□□ -1.07
VPS4B-205ENST00000591383 SLC39A6Q13433 755 aa8.34□□□□□ -1.07
VPS4B-205ENST00000591383 EZH2Q15910 746 aaKnown RBP8.34□□□□□ -1.07
VPS4B-205ENST00000591383 NPM2Q86SE8 214 aaKnown RBP8.34□□□□□ -1.07
VPS4B-205ENST00000591383 NUTM1Q86Y26 1132 aa8.34□□□□□ -1.07
VPS4B-205ENST00000591383 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
VPS4B-205ENST00000591383 SULF1Q8IWU6 871 aa8.34□□□□□ -1.07
VPS4B-205ENST00000591383 SMARCC1Q92922 1105 aaPredicted RBP8.34□□□□□ -1.07
VPS4B-205ENST00000591383 TSPYL4Q9UJ04 414 aa8.34□□□□□ -1.07
VPS4B-205ENST00000591383 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
VPS4B-205ENST00000591383 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
VPS4B-205ENST00000591383 HOXB3P14651 431 aaPredicted RBP8.33□□□□□ -1.08
VPS4B-205ENST00000591383 KCNQ4P56696 695 aa8.33□□□□□ -1.08
VPS4B-205ENST00000591383 HNRNPUQ00839 825 aaKnown RBP eCLIP8.33□□□□□ -1.08
VPS4B-205ENST00000591383 CSPP1Q1MSJ5 1256 aa8.33□□□□□ -1.08
VPS4B-205ENST00000591383 ATG3Q9NT62 314 aa8.33□□□□□ -1.08
VPS4B-205ENST00000591383 TSKSQ9UJT2 592 aa8.33□□□□□ -1.08
VPS4B-205ENST00000591383 C4AP0C0L4 1744 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 DDX11L8A8MPP1 907 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 C3orf80F5H4A9 247 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 LILRB3O75022 631 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 NDUFV2P19404 249 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 GJA5P36382 358 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 SIK1P57059 783 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 CALD1Q05682 793 aaKnown RBP8.32□□□□□ -1.08
VPS4B-205ENST00000591383 QPCTQ16769 361 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 TXNRD1Q16881 649 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 DOK7Q18PE1 504 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 GPR153Q6NV75 609 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 NUDT18Q6ZVK8 323 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 MIS18AQ9NYP9 233 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 QSER1Q2KHR3 1735 aa8.32□□□□□ -1.08
VPS4B-205ENST00000591383 DNAJB2P25686 324 aa8.31□□□□□ -1.08
VPS4B-205ENST00000591383 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
VPS4B-205ENST00000591383 ZNF790Q6PG37 636 aa8.31□□□□□ -1.08
VPS4B-205ENST00000591383 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
VPS4B-205ENST00000591383 CAMKK2Q96RR4 588 aa8.31□□□□□ -1.08
VPS4B-205ENST00000591383 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
VPS4B-205ENST00000591383 PCDHB15Q9Y5E8 787 aa8.31□□□□□ -1.08
VPS4B-205ENST00000591383 PLSCR1O15162 318 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 KCNQ3O43525 872 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 ABL2P42684 1182 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 RTL5Q5HYW3 569 aaPredicted RBP8.3□□□□□ -1.08
VPS4B-205ENST00000591383 SLC27A3Q5K4L6 730 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 WWC1Q8IX03 1113 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
VPS4B-205ENST00000591383 FMNL2Q96PY5 1086 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 BCL2L12Q9HB09 334 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 LHX6Q9UPM6 363 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 HEG1Q9ULI3 1381 aa8.3□□□□□ -1.08
VPS4B-205ENST00000591383 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms