RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 TPTE2Q6XPS3 522 aa23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 NUTM1Q86Y26 1132 aa23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 CCDC191Q8NCU4 936 aa23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 PANK1Q8TE04 598 aa23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 UTP14AQ9BVJ6 771 aaKnown RBP23.23■■□□□ 1.31
CROCCP3-205ENST00000591316 SCN7AQ01118 1682 aa23.22■■□□□ 1.31
CROCCP3-205ENST00000591316 BCORQ6W2J9 1755 aa23.22■■□□□ 1.31
CROCCP3-205ENST00000591316 CARMIL3Q8ND23 1372 aa23.22■■□□□ 1.31
CROCCP3-205ENST00000591316 ARFGEF2Q9Y6D5 1785 aa23.21■■□□□ 1.31
CROCCP3-205ENST00000591316 RLBP1P12271 317 aa23.21■■□□□ 1.31
CROCCP3-205ENST00000591316 RRP1P56182 461 aaKnown RBP23.21■■□□□ 1.31
CROCCP3-205ENST00000591316 SYNE4Q8N205 404 aa23.21■■□□□ 1.31
CROCCP3-205ENST00000591316 TMEM57Q8N5G2 664 aa23.21■■□□□ 1.31
CROCCP3-205ENST00000591316 FAM89AQ96GI7 184 aa23.21■■□□□ 1.31
CROCCP3-205ENST00000591316 CCT4P50991 539 aaKnown RBP23.2■■□□□ 1.3
CROCCP3-205ENST00000591316 GCKRQ14397 625 aa23.2■■□□□ 1.3
CROCCP3-205ENST00000591316 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
CROCCP3-205ENST00000591316 SGIP1Q9BQI5 828 aa23.2■■□□□ 1.3
CROCCP3-205ENST00000591316 NYXQ9GZU5 481 aa23.2■■□□□ 1.3
CROCCP3-205ENST00000591316 PPP1R1BQ9UD71 204 aaPredicted RBP23.2■■□□□ 1.3
CROCCP3-205ENST00000591316 CNBD1Q8NA66 436 aa23.19■■□□□ 1.3
CROCCP3-205ENST00000591316 ABCC4O15439 1325 aa23.19■■□□□ 1.3
CROCCP3-205ENST00000591316 ALDH1L1O75891 902 aa23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 MS4A1P11836 297 aa23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 ERFEQ4G0M1 354 aa23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 PRR5LQ6MZQ0 368 aa23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 KLHL34Q8N239 644 aa23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 C9orf78Q9NZ63 289 aaPredicted RBP23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 NTSR2O95665 410 aa23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 INTS3Q68E01 1043 aaKnown RBP23.18■■□□□ 1.3
CROCCP3-205ENST00000591316 ITPRIPQ8IWB1 547 aa23.17■■□□□ 1.3
CROCCP3-205ENST00000591316 ZBTB38Q8NAP3 1195 aaPredicted RBP23.17■■□□□ 1.3
CROCCP3-205ENST00000591316 ST5P78524 1137 aa23.16■■□□□ 1.3
CROCCP3-205ENST00000591316 UBE3BQ7Z3V4 1068 aa23.16■■□□□ 1.3
CROCCP3-205ENST00000591316 COG6Q9Y2V7 657 aa23.15■■□□□ 1.3
CROCCP3-205ENST00000591316 SH3TC1Q8TE82 1336 aa23.15■■□□□ 1.3
CROCCP3-205ENST00000591316 H7C1W4 665 aa23.14■■□□□ 1.3
CROCCP3-205ENST00000591316 GRM8O00222 908 aa23.14■■□□□ 1.3
CROCCP3-205ENST00000591316 PCCAP05165 728 aaPredicted RBP23.14■■□□□ 1.3
CROCCP3-205ENST00000591316 HCLS1P14317 486 aaPredicted RBP23.14■■□□□ 1.3
CROCCP3-205ENST00000591316 IRS4O14654 1257 aaPredicted RBP23.14■■□□□ 1.29
CROCCP3-205ENST00000591316 NBPF7P0C2Y1 421 aaPredicted RBP23.14■■□□□ 1.29
CROCCP3-205ENST00000591316 PDE3AQ14432 1141 aa23.14■■□□□ 1.29
CROCCP3-205ENST00000591316 USP44Q9H0E7 712 aa23.14■■□□□ 1.29
CROCCP3-205ENST00000591316 RNF123Q5XPI4 1314 aa23.13■■□□□ 1.29
CROCCP3-205ENST00000591316 ANKRD36CQ5JPF3 1778 aa23.12■■□□□ 1.29
CROCCP3-205ENST00000591316 MEIS3Q99687 375 aa23.11■■□□□ 1.29
CROCCP3-205ENST00000591316 PXDNLA1KZ92 1463 aa23.11■■□□□ 1.29
CROCCP3-205ENST00000591316 MVPQ14764 893 aaKnown RBP23.1■■□□□ 1.29
CROCCP3-205ENST00000591316 SLC10A5Q5PT55 438 aa23.1■■□□□ 1.29
CROCCP3-205ENST00000591316 NLRP3Q96P20 1036 aa23.1■■□□□ 1.29
CROCCP3-205ENST00000591316 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
CROCCP3-205ENST00000591316 AFDNP55196 1824 aaKnown RBP23.09■■□□□ 1.29
CROCCP3-205ENST00000591316 ABCC12Q96J65 1359 aa23.09■■□□□ 1.29
CROCCP3-205ENST00000591316 CASP7P55210 303 aa23.09■■□□□ 1.29
CROCCP3-205ENST00000591316 IRX6P78412 446 aaPredicted RBP23.09■■□□□ 1.29
CROCCP3-205ENST00000591316 IBTKQ9P2D0 1353 aaPredicted RBP23.08■■□□□ 1.29
CROCCP3-205ENST00000591316 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
CROCCP3-205ENST00000591316 ZBTB7BO15156 539 aaPredicted RBP23.07■■□□□ 1.28
CROCCP3-205ENST00000591316 UBTFL1P0CB47 393 aaPredicted RBP23.07■■□□□ 1.28
CROCCP3-205ENST00000591316 PDE6BP35913 854 aa23.07■■□□□ 1.28
CROCCP3-205ENST00000591316 SUCLG2Q96I99 432 aa23.07■■□□□ 1.28
CROCCP3-205ENST00000591316 CCDC85AQ96PX6 553 aaPredicted RBP23.07■■□□□ 1.28
CROCCP3-205ENST00000591316 PDE8AO60658 829 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 FHDC1Q9C0D6 1143 aaPredicted RBP23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 COL24A1Q17RW2 1714 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 UTYO14607 1347 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 CDHR2Q9BYE9 1310 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 GNAI3P08754 354 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 CHRNA5P30532 468 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 CRBNQ96SW2 442 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 DDX19BQ9UMR2 479 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 CD2APQ9Y5K6 639 aa23.06■■□□□ 1.28
CROCCP3-205ENST00000591316 A0A0G2JLW4 131 aa23.05■■□□□ 1.28
CROCCP3-205ENST00000591316 HSP90B1P14625 803 aaKnown RBP23.05■■□□□ 1.28
CROCCP3-205ENST00000591316 C2CD5Q86YS7 1000 aa23.05■■□□□ 1.28
CROCCP3-205ENST00000591316 H0YIN7 160 aa23.04■■□□□ 1.28
CROCCP3-205ENST00000591316 EPHA10Q5JZY3 1008 aa23.04■■□□□ 1.28
CROCCP3-205ENST00000591316 KAZALD1Q96I82 304 aa23.03■■□□□ 1.28
CROCCP3-205ENST00000591316 C1orf115Q9H7X2 142 aa23.03■■□□□ 1.28
CROCCP3-205ENST00000591316 WWC3Q9ULE0 1092 aa23.03■■□□□ 1.28
CROCCP3-205ENST00000591316 CHMP3Q9Y3E7 222 aa23.03■■□□□ 1.28
CROCCP3-205ENST00000591316 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
CROCCP3-205ENST00000591316 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
CROCCP3-205ENST00000591316 DPEP1P16444 411 aa23.02■■□□□ 1.28
CROCCP3-205ENST00000591316 FOXO4P98177 505 aa23.02■■□□□ 1.28
CROCCP3-205ENST00000591316 ZNF622Q969S3 477 aaKnown RBP eCLIP23.02■■□□□ 1.28
CROCCP3-205ENST00000591316 BICC1Q9H694 974 aaKnown RBP23.02■■□□□ 1.28
CROCCP3-205ENST00000591316 C10orf71Q711Q0 1435 aa23.02■■□□□ 1.28
CROCCP3-205ENST00000591316 CTSWP56202 376 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 TGFB2P61812 414 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 LMBR1LQ6UX01 489 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 TTLL11Q8NHH1 800 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 SYT17Q9BSW7 474 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 PLA2G12BQ9BX93 195 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 GNAI2P04899 355 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 HDAC5Q9UQL6 1122 aa23.01■■□□□ 1.27
CROCCP3-205ENST00000591316 KLRG2A4D1S0 409 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms