RNA–Protein interactions for RNA: ENST00000590402.1

WIPI1-208, Transcript of WD repeat domain, phosphoinositide interacting 1, human

TSL 2

Gene WIPI1, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WIPI1-208	ENST00000590402	NUTM1	Q86Y26	1132 aa		13.64	□□□□□ -0.23
WIPI1-208	ENST00000590402	C8orf58	Q8NAV2	365 aa		13.64	□□□□□ -0.23
WIPI1-208	ENST00000590402	MASTL	Q96GX5	879 aa		13.64	□□□□□ -0.23
WIPI1-208	ENST00000590402	HYPK	Q9NX55	129 aa		13.64	□□□□□ -0.23
WIPI1-208	ENST00000590402	IL16	Q14005	1332 aa		13.64	□□□□□ -0.23
WIPI1-208	ENST00000590402	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.63	□□□□□ -0.23
WIPI1-208	ENST00000590402	ERFE	Q4G0M1	354 aa		13.63	□□□□□ -0.23
WIPI1-208	ENST00000590402	SUSD4	Q5VX71	490 aa		13.63	□□□□□ -0.23
WIPI1-208	ENST00000590402	PPP1R42	Q7Z4L9	355 aa		13.63	□□□□□ -0.23
WIPI1-208	ENST00000590402	CNKSR1	Q969H4	720 aa		13.63	□□□□□ -0.23
WIPI1-208	ENST00000590402	CHMP4A	Q9BY43	222 aa		13.63	□□□□□ -0.23
WIPI1-208	ENST00000590402	ABCC12	Q96J65	1359 aa		13.62	□□□□□ -0.23
WIPI1-208	ENST00000590402	KLRG2	A4D1S0	409 aa	Predicted RBP	13.62	□□□□□ -0.23
WIPI1-208	ENST00000590402	NPR1	P16066	1061 aa		13.62	□□□□□ -0.23
WIPI1-208	ENST00000590402	PRPF40B	Q6NWY9	871 aa	Known RBP	13.62	□□□□□ -0.23
WIPI1-208	ENST00000590402	ZNF526	Q8TF50	670 aa	Predicted RBP	13.62	□□□□□ -0.23
WIPI1-208	ENST00000590402	C21orf2	O43822	256 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	NTSR2	O95665	410 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	TCIRG1	Q13488	830 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	CCDC30	Q5VVM6	783 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	C9orf131	Q5VYM1	1079 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	ANKRD13D	Q6ZTN6	518 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	WDR63	Q8IWG1	891 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	TSPYL6	Q8N831	410 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	PLBD2	Q8NHP8	589 aa		13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	UTP14A	Q9BVJ6	771 aa	Known RBP	13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.61	□□□□□ -0.23
WIPI1-208	ENST00000590402	RASSF7	Q02833	373 aa		13.6	□□□□□ -0.23
WIPI1-208	ENST00000590402	GOLGA2	Q08379	1002 aa		13.6	□□□□□ -0.23
WIPI1-208	ENST00000590402	RIC1	Q4ADV7	1423 aa		13.6	□□□□□ -0.23
WIPI1-208	ENST00000590402	RNF181	Q9P0P0	153 aa		13.6	□□□□□ -0.23
WIPI1-208	ENST00000590402	FANCI	Q9NVI1	1328 aa		13.6	□□□□□ -0.23
WIPI1-208	ENST00000590402	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	TWISTNB	Q3B726	338 aa	Predicted RBP	13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	SOGA3	Q5TF21	947 aa		13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	NLRP10	Q86W26	655 aa		13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	RPGR	Q92834	1020 aa	Known RBP	13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	STK31	Q9BXU1	1019 aa		13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	PHAX	Q9H814	394 aa	Known RBP	13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	RNF123	Q5XPI4	1314 aa		13.59	□□□□□ -0.23
WIPI1-208	ENST00000590402	ANKRD36C	Q5JPF3	1778 aa		13.58	□□□□□ -0.23
WIPI1-208	ENST00000590402	NFKBIE	O00221	500 aa		13.58	□□□□□ -0.24
WIPI1-208	ENST00000590402	LMNB1	P20700	586 aa		13.58	□□□□□ -0.24
WIPI1-208	ENST00000590402	ALDH1B1	P30837	517 aa		13.58	□□□□□ -0.24
WIPI1-208	ENST00000590402	CRY2	Q49AN0	593 aa		13.58	□□□□□ -0.24
WIPI1-208	ENST00000590402	RIC3	Q7Z5B4	369 aa		13.58	□□□□□ -0.24
WIPI1-208	ENST00000590402	TRMT112	Q9UI30	125 aa	Known RBP	13.58	□□□□□ -0.24
WIPI1-208	ENST00000590402	ATP5J2-PTCD1	G3V325	749 aa		13.57	□□□□□ -0.24
WIPI1-208	ENST00000590402	DDX58	O95786	925 aa	Known RBP	13.57	□□□□□ -0.24
WIPI1-208	ENST00000590402	NLRP3	Q96P20	1036 aa		13.57	□□□□□ -0.24
WIPI1-208	ENST00000590402	ARFGEF2	Q9Y6D5	1785 aa		13.57	□□□□□ -0.24
WIPI1-208	ENST00000590402	SH3TC1	Q8TE82	1336 aa		13.57	□□□□□ -0.24
WIPI1-208	ENST00000590402	SLX4	Q8IY92	1834 aa		13.57	□□□□□ -0.24
WIPI1-208	ENST00000590402	CACNA1S	Q13698	1873 aa		13.57	□□□□□ -0.24
WIPI1-208	ENST00000590402	CCER2	I3L3R5	266 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	TCERG1	O14776	1098 aa	Known RBP	13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	CCDC93	Q567U6	631 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	SLC10A5	Q5PT55	438 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	C3orf67	Q6ZVT6	689 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	PLCD3	Q8N3E9	789 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	ZNF428	Q96B54	188 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	ISCA1	Q9BUE6	129 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	TAOK3	Q9H2K8	898 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	MYH16	Q9H6N6	1097 aa		13.56	□□□□□ -0.24
WIPI1-208	ENST00000590402	HOXA10	P31260	410 aa	Predicted RBP	13.55	□□□□□ -0.24
WIPI1-208	ENST00000590402	EXOSC9	Q06265	439 aa	Known RBP	13.55	□□□□□ -0.24
WIPI1-208	ENST00000590402	C7orf43	Q8WVR3	580 aa		13.55	□□□□□ -0.24
WIPI1-208	ENST00000590402	RBM17	Q96I25	401 aa	Known RBP	13.55	□□□□□ -0.24
WIPI1-208	ENST00000590402	HCLS1	P14317	486 aa	Predicted RBP	13.54	□□□□□ -0.24
WIPI1-208	ENST00000590402	PRELP	P51888	382 aa		13.54	□□□□□ -0.24
WIPI1-208	ENST00000590402	SYNE4	Q8N205	404 aa		13.54	□□□□□ -0.24
WIPI1-208	ENST00000590402	MYD88	Q99836	296 aa		13.54	□□□□□ -0.24
WIPI1-208	ENST00000590402	LTBP3	Q9NS15	1303 aa		13.54	□□□□□ -0.24
WIPI1-208	ENST00000590402	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.54	□□□□□ -0.24
WIPI1-208	ENST00000590402	SBF1	O95248	1867 aa		13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	TRIM28	Q13263	835 aa	Known RBP	13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	OLFM4	Q6UX06	510 aa		13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	RTKN2	Q8IZC4	609 aa		13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	FAM89A	Q96GI7	184 aa		13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	CRAMP1	Q96RY5	1269 aa		13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	KDM2B	Q8NHM5	1336 aa		13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	FER1L6	Q2WGJ9	1857 aa		13.53	□□□□□ -0.24
WIPI1-208	ENST00000590402	PI4KAP2	A4QPH2	592 aa		13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	PPEF1	O14829	653 aa	Predicted RBP	13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	VAMP4	O75379	141 aa		13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	C1QTNF8	P60827	252 aa		13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	RTL5	Q5HYW3	569 aa	Predicted RBP	13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	KSR2	Q6VAB6	950 aa		13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	PI4KAP1	Q8N8J0	262 aa		13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	METTL22	Q9BUU2	404 aa	Predicted RBP	13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	MAP3K2	Q9Y2U5	619 aa		13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	ZNF521	Q96K83	1311 aa		13.52	□□□□□ -0.25
WIPI1-208	ENST00000590402	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
WIPI1-208	ENST00000590402	DIEXF	Q68CQ4	756 aa	Known RBP	13.51	□□□□□ -0.25
WIPI1-208	ENST00000590402	CC2D2B	Q6DHV5	1058 aa		13.51	□□□□□ -0.25
WIPI1-208	ENST00000590402	G2E3	Q7L622	706 aa		13.51	□□□□□ -0.25
WIPI1-208	ENST00000590402	CCDC191	Q8NCU4	936 aa		13.51	□□□□□ -0.25
WIPI1-208	ENST00000590402	TMX4	Q9H1E5	349 aa	Predicted RBP	13.51	□□□□□ -0.25
WIPI1-208	ENST00000590402	NMRK2	Q9NPI5	230 aa		13.51	□□□□□ -0.25
WIPI1-208	ENST00000590402	CWC25	Q9NXE8	425 aa	Predicted RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms