RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 RPGRQ92834 1020 aaKnown RBP9.9□□□□□ -0.82
NPC1-208ENST00000590301 CFAP44Q96MT7 982 aa9.9□□□□□ -0.82
NPC1-208ENST00000590301 CHMP4AQ9BY43 222 aa9.9□□□□□ -0.82
NPC1-208ENST00000590301 DDX21Q9NR30 783 aaKnown RBP eCLIP9.9□□□□□ -0.82
NPC1-208ENST00000590301 DLEC1Q9Y238 1755 aa9.9□□□□□ -0.82
NPC1-208ENST00000590301 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 AFDNP55196 1824 aaKnown RBP9.89□□□□□ -0.83
NPC1-208ENST00000590301 VIRMAQ69YN4 1812 aaKnown RBP9.89□□□□□ -0.83
NPC1-208ENST00000590301 LAMB4A4D0S4 1761 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 KDM3BQ7LBC6 1761 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 IQCA1LA6NCM1 817 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 NTSR2O95665 410 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 GPTP24298 496 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 SLC10A5Q5PT55 438 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 HDGFL1Q5TGJ6 251 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 SUSD4Q5VX71 490 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 NUTM1Q86Y26 1132 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 RBM17Q96I25 401 aaKnown RBP9.89□□□□□ -0.83
NPC1-208ENST00000590301 CRAMP1Q96RY5 1269 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 PSMD1Q99460 953 aa9.89□□□□□ -0.83
NPC1-208ENST00000590301 UTP14AQ9BVJ6 771 aaKnown RBP9.89□□□□□ -0.83
NPC1-208ENST00000590301 PROSER3Q2NL68 480 aa9.88□□□□□ -0.83
NPC1-208ENST00000590301 COPS6Q7L5N1 327 aa9.88□□□□□ -0.83
NPC1-208ENST00000590301 XAGE3Q8WTP9 111 aa9.88□□□□□ -0.83
NPC1-208ENST00000590301 NLRP3Q96P20 1036 aa9.88□□□□□ -0.83
NPC1-208ENST00000590301 TMX4Q9H1E5 349 aaPredicted RBP9.88□□□□□ -0.83
NPC1-208ENST00000590301 IFT57Q9NWB7 429 aa9.88□□□□□ -0.83
NPC1-208ENST00000590301 DBF4Q9UBU7 674 aaPredicted RBP9.88□□□□□ -0.83
NPC1-208ENST00000590301 LAS1LQ9Y4W2 734 aaKnown RBP9.88□□□□□ -0.83
NPC1-208ENST00000590301 GNAI1P63096 354 aa9.87□□□□□ -0.83
NPC1-208ENST00000590301 TCIRG1Q13488 830 aa9.87□□□□□ -0.83
NPC1-208ENST00000590301 L3MBTL3Q96JM7 780 aaPredicted RBP9.87□□□□□ -0.83
NPC1-208ENST00000590301 HYPKQ9NX55 129 aa9.87□□□□□ -0.83
NPC1-208ENST00000590301 POTECB2RU33 542 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 ZNF853P0CG23 659 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 COL11A2P13942 1736 aaPredicted RBP9.86□□□□□ -0.83
NPC1-208ENST00000590301 IARSP41252 1262 aaKnown RBP9.86□□□□□ -0.83
NPC1-208ENST00000590301 AIMP1Q12904 312 aaKnown RBP9.86□□□□□ -0.83
NPC1-208ENST00000590301 NLRP10Q86W26 655 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 SYNE4Q8N205 404 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 DNAJC5GQ8N7S2 189 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 ANKRD31Q8N7Z5 1873 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 PLBD2Q8NHP8 589 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 JDP2Q8WYK2 163 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 VPS33BQ9H267 617 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 ZNF277Q9NRM2 450 aaPredicted RBP9.86□□□□□ -0.83
NPC1-208ENST00000590301 CHPF2Q9P2E5 772 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 TAOK2Q9UL54 1235 aa9.86□□□□□ -0.83
NPC1-208ENST00000590301 TNRC6CQ9HCJ0 1690 aaKnown RBP9.86□□□□□ -0.83
NPC1-208ENST00000590301 SH3TC1Q8TE82 1336 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 FZD9O00144 591 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 APAF1O14727 1248 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
NPC1-208ENST00000590301 BBOX1O75936 387 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 DDNO94850 711 aaPredicted RBP9.85□□□□□ -0.83
NPC1-208ENST00000590301 ANXA1P04083 346 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 PRKCSHP14314 528 aaPredicted RBP9.85□□□□□ -0.83
NPC1-208ENST00000590301 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 TMC4Q7Z404 712 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
NPC1-208ENST00000590301 TRMT112Q9UI30 125 aaKnown RBP9.85□□□□□ -0.83
NPC1-208ENST00000590301 HSP90B1P14625 803 aaKnown RBP9.84□□□□□ -0.83
NPC1-208ENST00000590301 TRIM28Q13263 835 aaKnown RBP9.84□□□□□ -0.83
NPC1-208ENST00000590301 KRT24Q2M2I5 525 aa9.84□□□□□ -0.83
NPC1-208ENST00000590301 CHADLQ6NUI6 762 aa9.84□□□□□ -0.83
NPC1-208ENST00000590301 GPC2Q8N158 579 aa9.84□□□□□ -0.83
NPC1-208ENST00000590301 SUPT20HQ8NEM7 779 aa9.84□□□□□ -0.83
NPC1-208ENST00000590301 KLRG1Q96E93 195 aa9.84□□□□□ -0.83
NPC1-208ENST00000590301 ATP6V0A2Q9Y487 856 aa9.84□□□□□ -0.83
NPC1-208ENST00000590301 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
NPC1-208ENST00000590301 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
NPC1-208ENST00000590301 CCDC27Q2M243 656 aa9.83□□□□□ -0.84
NPC1-208ENST00000590301 OLFM4Q6UX06 510 aa9.83□□□□□ -0.84
NPC1-208ENST00000590301 DDX46Q7L014 1031 aaKnown RBP9.83□□□□□ -0.84
NPC1-208ENST00000590301 PNMA8AQ86V59 439 aaPredicted RBP9.83□□□□□ -0.84
NPC1-208ENST00000590301 LDHDQ86WU2 507 aa9.83□□□□□ -0.84
NPC1-208ENST00000590301 JMYQ8N9B5 988 aa9.83□□□□□ -0.84
NPC1-208ENST00000590301 ISCA1Q9BUE6 129 aa9.83□□□□□ -0.84
NPC1-208ENST00000590301 TAF1DQ9H5J8 278 aaPredicted RBP9.83□□□□□ -0.84
NPC1-208ENST00000590301 HACL1Q9UJ83 578 aa9.83□□□□□ -0.84
NPC1-208ENST00000590301 WDR90Q96KV7 1748 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 LARGE2Q8N3Y3 721 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 RTFDC1Q9BY42 306 aaPredicted RBP9.82□□□□□ -0.84
NPC1-208ENST00000590301 DLG5Q8TDM6 1919 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 ABCC4O15439 1325 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 IL16Q14005 1332 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 ZNF541Q9H0D2 1346 aa9.82□□□□□ -0.84
NPC1-208ENST00000590301 ARFGEF2Q9Y6D5 1785 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
NPC1-208ENST00000590301 ANP32CO43423 234 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 DDX58O95786 925 aaKnown RBP9.81□□□□□ -0.84
NPC1-208ENST00000590301 HCLS1P14317 486 aaPredicted RBP9.81□□□□□ -0.84
NPC1-208ENST00000590301 GRAPQ13588 217 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 CCDC30Q5VVM6 783 aa9.81□□□□□ -0.84
NPC1-208ENST00000590301 DPP8Q6V1X1 898 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms