RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 MYD88Q99836 296 aa18.02■□□□□ 0.48
SCAMP4-212ENST00000590266 IBTKQ9P2D0 1353 aaPredicted RBP18.02■□□□□ 0.47
SCAMP4-212ENST00000590266 C21orf2O43822 256 aa18.01■□□□□ 0.47
SCAMP4-212ENST00000590266 VAMP4O75379 141 aa18.01■□□□□ 0.47
SCAMP4-212ENST00000590266 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-212ENST00000590266 PRPF40BQ6NWY9 871 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-212ENST00000590266 G2E3Q7L622 706 aa18.01■□□□□ 0.47
SCAMP4-212ENST00000590266 RPGRQ92834 1020 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-212ENST00000590266 CNKSR1Q969H4 720 aa18.01■□□□□ 0.47
SCAMP4-212ENST00000590266 HCLS1P14317 486 aaPredicted RBP18■□□□□ 0.47
SCAMP4-212ENST00000590266 RASSF7Q02833 373 aa18■□□□□ 0.47
SCAMP4-212ENST00000590266 SYNE4Q8N205 404 aa18■□□□□ 0.47
SCAMP4-212ENST00000590266 MAP3K2Q9Y2U5 619 aa18■□□□□ 0.47
SCAMP4-212ENST00000590266 E9PSI1 815 aa17.99■□□□□ 0.47
SCAMP4-212ENST00000590266 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
SCAMP4-212ENST00000590266 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
SCAMP4-212ENST00000590266 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
SCAMP4-212ENST00000590266 ANKRD31Q8N7Z5 1873 aa17.99■□□□□ 0.47
SCAMP4-212ENST00000590266 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 COL11A2P13942 1736 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 KLRG2A4D1S0 409 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 PI4KAP2A4QPH2 592 aa17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 FLIIQ13045 1269 aa17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 PI4KAP1Q8N8J0 262 aa17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 FAM89AQ96GI7 184 aa17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 NLRP3Q96P20 1036 aa17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 ADCY9O60503 1353 aa17.98■□□□□ 0.47
SCAMP4-212ENST00000590266 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-212ENST00000590266 C9orf131Q5VYM1 1079 aa17.97■□□□□ 0.47
SCAMP4-212ENST00000590266 KSR2Q6VAB6 950 aa17.97■□□□□ 0.47
SCAMP4-212ENST00000590266 NUP98P52948 1817 aa17.97■□□□□ 0.47
SCAMP4-212ENST00000590266 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-212ENST00000590266 SLFN5Q08AF3 891 aa17.96■□□□□ 0.47
SCAMP4-212ENST00000590266 CRY2Q49AN0 593 aa17.96■□□□□ 0.47
SCAMP4-212ENST00000590266 RBM17Q96I25 401 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-212ENST00000590266 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-212ENST00000590266 RNF181Q9P0P0 153 aa17.96■□□□□ 0.47
SCAMP4-212ENST00000590266 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.46
SCAMP4-212ENST00000590266 ALDH1B1P30837 517 aa17.95■□□□□ 0.46
SCAMP4-212ENST00000590266 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
SCAMP4-212ENST00000590266 OLFM4Q6UX06 510 aa17.95■□□□□ 0.46
SCAMP4-212ENST00000590266 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-212ENST00000590266 HNRNPUQ00839 825 aaKnown RBP eCLIP17.94■□□□□ 0.46
SCAMP4-212ENST00000590266 SLC10A5Q5PT55 438 aa17.94■□□□□ 0.46
SCAMP4-212ENST00000590266 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-212ENST00000590266 RIC1Q4ADV7 1423 aa17.94■□□□□ 0.46
SCAMP4-212ENST00000590266 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-212ENST00000590266 NFKBIEO00221 500 aa17.93■□□□□ 0.46
SCAMP4-212ENST00000590266 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-212ENST00000590266 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
SCAMP4-212ENST00000590266 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-212ENST00000590266 TRIM28Q13263 835 aaKnown RBP17.92■□□□□ 0.46
SCAMP4-212ENST00000590266 CCDC93Q567U6 631 aa17.92■□□□□ 0.46
SCAMP4-212ENST00000590266 SOGA3Q5TF21 947 aa17.92■□□□□ 0.46
SCAMP4-212ENST00000590266 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
SCAMP4-212ENST00000590266 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 F6X3S4 739 aa17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 PPEF1O14829 653 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 IGKV5-2P06315 115 aa17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 DNAAF4Q8WXU2 420 aa17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 TAOK3Q9H2K8 898 aa17.91■□□□□ 0.46
SCAMP4-212ENST00000590266 ANKRD36CQ5JPF3 1778 aa17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 LMNB1P20700 586 aa17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 HOXA10P31260 410 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 PRELPP51888 382 aa17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 SLC51AQ86UW1 340 aa17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 C7orf43Q8WVR3 580 aa17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 CRAMP1Q96RY5 1269 aa17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 ABCC4O15439 1325 aa17.9■□□□□ 0.46
SCAMP4-212ENST00000590266 ARFGEF1Q9Y6D6 1849 aa17.89■□□□□ 0.45
SCAMP4-212ENST00000590266 NEURL1BA8MQ27 555 aa17.89■□□□□ 0.45
SCAMP4-212ENST00000590266 PCCAP05165 728 aaPredicted RBP17.89■□□□□ 0.45
SCAMP4-212ENST00000590266 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
SCAMP4-212ENST00000590266 CCDC85AQ96PX6 553 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-212ENST00000590266 TMX4Q9H1E5 349 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-212ENST00000590266 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
SCAMP4-212ENST00000590266 RTKN2Q8IZC4 609 aa17.87■□□□□ 0.45
SCAMP4-212ENST00000590266 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 KIF3CO14782 793 aa17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 HSP90B1P14625 803 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 GRAPQ13588 217 aa17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 TRMT2AQ8IZ69 625 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 MRPL50Q8N5N7 158 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 ZNF277Q9NRM2 450 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 SMC4Q9NTJ3 1288 aa17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 KDM2BQ8NHM5 1336 aa17.86■□□□□ 0.45
SCAMP4-212ENST00000590266 PDE8AO60658 829 aa17.85■□□□□ 0.45
SCAMP4-212ENST00000590266 HSPA6P17066 643 aa17.85■□□□□ 0.45
SCAMP4-212ENST00000590266 GCKRQ14397 625 aa17.85■□□□□ 0.45
SCAMP4-212ENST00000590266 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
SCAMP4-212ENST00000590266 LTBP3Q9NS15 1303 aa17.85■□□□□ 0.45
SCAMP4-212ENST00000590266 SF3B3Q15393 1217 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-212ENST00000590266 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms