RNA–Protein interactions for RNA: ENST00000590056.1

KDSR-210, Transcript of 3-ketodihydrosphingosine reductase, human

TSL 3

Gene KDSR, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDSR-210	ENST00000590056	TAOK3	Q9H2K8	898 aa		33.39	■■■□□ 2.94
KDSR-210	ENST00000590056	LTBP3	Q9NS15	1303 aa		33.38	■■■□□ 2.93
KDSR-210	ENST00000590056	CCDC93	Q567U6	631 aa		33.38	■■■□□ 2.93
KDSR-210	ENST00000590056	SLC10A5	Q5PT55	438 aa		33.38	■■■□□ 2.93
KDSR-210	ENST00000590056	WDR63	Q8IWG1	891 aa		33.38	■■■□□ 2.93
KDSR-210	ENST00000590056	ABCC12	Q96J65	1359 aa		33.37	■■■□□ 2.93
KDSR-210	ENST00000590056	NLRP10	Q86W26	655 aa		33.37	■■■□□ 2.93
KDSR-210	ENST00000590056	GOLGA2	Q08379	1002 aa		33.36	■■■□□ 2.93
KDSR-210	ENST00000590056	C7orf43	Q8WVR3	580 aa		33.36	■■■□□ 2.93
KDSR-210	ENST00000590056	RBM17	Q96I25	401 aa	Known RBP	33.36	■■■□□ 2.93
KDSR-210	ENST00000590056	HOXA10	P31260	410 aa	Predicted RBP	33.35	■■■□□ 2.93
KDSR-210	ENST00000590056	RTKN2	Q8IZC4	609 aa		33.35	■■■□□ 2.93
KDSR-210	ENST00000590056	TRMT112	Q9UI30	125 aa	Known RBP	33.35	■■■□□ 2.93
KDSR-210	ENST00000590056	TSR2	Q969E8	191 aa	Known RBP	33.34	■■■□□ 2.93
KDSR-210	ENST00000590056	SENP3-EIF4A1	A0A087X0R7	540 aa		33.33	■■■□□ 2.93
KDSR-210	ENST00000590056	CC2D2B	Q6DHV5	1058 aa		33.33	■■■□□ 2.93
KDSR-210	ENST00000590056	RIC3	Q7Z5B4	369 aa		33.33	■■■□□ 2.93
KDSR-210	ENST00000590056	SH3TC1	Q8TE82	1336 aa		33.32	■■■□□ 2.93
KDSR-210	ENST00000590056	DDX58	O95786	925 aa	Known RBP	33.32	■■■□□ 2.92
KDSR-210	ENST00000590056	GRIPAP1	Q4V328	841 aa		33.32	■■■□□ 2.92
KDSR-210	ENST00000590056	CRAMP1	Q96RY5	1269 aa		33.32	■■■□□ 2.92
KDSR-210	ENST00000590056	STK31	Q9BXU1	1019 aa		33.32	■■■□□ 2.92
KDSR-210	ENST00000590056	SLX4	Q8IY92	1834 aa		33.31	■■■□□ 2.92
KDSR-210	ENST00000590056	SALL2	Q9Y467	1007 aa	Predicted RBP	33.31	■■■□□ 2.92
KDSR-210	ENST00000590056	KIF3C	O14782	793 aa		33.3	■■■□□ 2.92
KDSR-210	ENST00000590056	TMX4	Q9H1E5	349 aa	Predicted RBP	33.3	■■■□□ 2.92
KDSR-210	ENST00000590056	SBF1	O95248	1867 aa		33.3	■■■□□ 2.92
KDSR-210	ENST00000590056	ARFGEF2	Q9Y6D5	1785 aa		33.29	■■■□□ 2.92
KDSR-210	ENST00000590056	TRIM28	Q13263	835 aa	Known RBP	33.29	■■■□□ 2.92
KDSR-210	ENST00000590056	TWISTNB	Q3B726	338 aa	Predicted RBP	33.29	■■■□□ 2.92
KDSR-210	ENST00000590056	DPY19L2	Q6NUT2	758 aa		33.29	■■■□□ 2.92
KDSR-210	ENST00000590056	TSPYL6	Q8N831	410 aa		33.29	■■■□□ 2.92
KDSR-210	ENST00000590056	ISCA1	Q9BUE6	129 aa		33.29	■■■□□ 2.92
KDSR-210	ENST00000590056	PRELP	P51888	382 aa		33.28	■■■□□ 2.92
KDSR-210	ENST00000590056	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.28	■■■□□ 2.92
KDSR-210	ENST00000590056	GLTPD2	A6NH11	291 aa		33.27	■■■□□ 2.92
KDSR-210	ENST00000590056	C16orf71	Q8IYS4	520 aa	Predicted RBP	33.27	■■■□□ 2.92
KDSR-210	ENST00000590056	PHAX	Q9H814	394 aa	Known RBP	33.27	■■■□□ 2.92
KDSR-210	ENST00000590056	NMRK2	Q9NPI5	230 aa		33.26	■■■□□ 2.91
KDSR-210	ENST00000590056	ATP5J2-PTCD1	G3V325	749 aa		33.25	■■■□□ 2.91
KDSR-210	ENST00000590056	TOMM70	O94826	608 aa		33.25	■■■□□ 2.91
KDSR-210	ENST00000590056	HSP90B1	P14625	803 aa	Known RBP	33.25	■■■□□ 2.91
KDSR-210	ENST00000590056	ANKRD36C	Q5JPF3	1778 aa		33.24	■■■□□ 2.91
KDSR-210	ENST00000590056	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.24	■■■□□ 2.91
KDSR-210	ENST00000590056	FER1L6	Q2WGJ9	1857 aa		33.24	■■■□□ 2.91
KDSR-210	ENST00000590056	HCLS1	P14317	486 aa	Predicted RBP	33.23	■■■□□ 2.91
KDSR-210	ENST00000590056	MYH16	Q9H6N6	1097 aa		33.23	■■■□□ 2.91
KDSR-210	ENST00000590056	FANCI	Q9NVI1	1328 aa		33.23	■■■□□ 2.91
KDSR-210	ENST00000590056	PPEF1	O14829	653 aa	Predicted RBP	33.21	■■■□□ 2.91
KDSR-210	ENST00000590056	BBOX1	O75936	387 aa		33.21	■■■□□ 2.91
KDSR-210	ENST00000590056	C3orf67	Q6ZVT6	689 aa		33.21	■■■□□ 2.91
KDSR-210	ENST00000590056	DDX46	Q7L014	1031 aa	Known RBP	33.21	■■■□□ 2.91
KDSR-210	ENST00000590056	PSMD1	Q99460	953 aa		33.21	■■■□□ 2.91
KDSR-210	ENST00000590056	RRAGC	Q9HB90	399 aa		33.21	■■■□□ 2.91
KDSR-210	ENST00000590056	CACNA1S	Q13698	1873 aa		33.2	■■■□□ 2.9
KDSR-210	ENST00000590056	SYNE4	Q8N205	404 aa		33.19	■■■□□ 2.9
KDSR-210	ENST00000590056	CCDC191	Q8NCU4	936 aa		33.19	■■■□□ 2.9
KDSR-210	ENST00000590056	SLC4A2	P04920	1241 aa		33.18	■■■□□ 2.9
KDSR-210	ENST00000590056	VEGFA	P15692	232 aa	Predicted RBP	33.18	■■■□□ 2.9
KDSR-210	ENST00000590056	OLFM4	Q6UX06	510 aa		33.18	■■■□□ 2.9
KDSR-210	ENST00000590056	KSR2	Q6VAB6	950 aa		33.18	■■■□□ 2.9
KDSR-210	ENST00000590056	FAM89A	Q96GI7	184 aa		33.18	■■■□□ 2.9
KDSR-210	ENST00000590056	MYD88	Q99836	296 aa		33.18	■■■□□ 2.9
KDSR-210	ENST00000590056	METTL22	Q9BUU2	404 aa	Predicted RBP	33.18	■■■□□ 2.9
KDSR-210	ENST00000590056	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	33.17	■■■□□ 2.9
KDSR-210	ENST00000590056	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.17	■■■□□ 2.9
KDSR-210	ENST00000590056	NEXN	Q0ZGT2	675 aa		33.16	■■■□□ 2.9
KDSR-210	ENST00000590056	TMC4	Q7Z404	712 aa		33.16	■■■□□ 2.9
KDSR-210	ENST00000590056	RBM46	Q8TBY0	533 aa	Known RBP	33.16	■■■□□ 2.9
KDSR-210	ENST00000590056	ATP6V0A2	Q9Y487	856 aa		33.16	■■■□□ 2.9
KDSR-210	ENST00000590056	ABCC4	O15439	1325 aa		33.15	■■■□□ 2.9
KDSR-210	ENST00000590056	IARS	P41252	1262 aa	Known RBP	33.15	■■■□□ 2.9
KDSR-210	ENST00000590056	CWC25	Q9NXE8	425 aa	Predicted RBP	33.15	■■■□□ 2.9
KDSR-210	ENST00000590056	MAP3K2	Q9Y2U5	619 aa		33.15	■■■□□ 2.9
KDSR-210	ENST00000590056	IRS4	O14654	1257 aa	Predicted RBP	33.14	■■■□□ 2.9
KDSR-210	ENST00000590056	EXOSC9	Q06265	439 aa	Known RBP	33.14	■■■□□ 2.9
KDSR-210	ENST00000590056	CCDC88A	Q3V6T2	1871 aa		33.14	■■■□□ 2.9
KDSR-210	ENST00000590056	PI4KAP2	A4QPH2	592 aa		33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	CCER2	I3L3R5	266 aa		33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	TCERG1	O14776	1098 aa	Known RBP	33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	VAMP4	O75379	141 aa		33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	GRAP	Q13588	217 aa		33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	SF3B3	Q15393	1217 aa	Known RBP	33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	PI4KAP1	Q8N8J0	262 aa		33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	GRAPL	Q8TC17	118 aa	Predicted RBP	33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	JDP2	Q8WYK2	163 aa		33.13	■■■□□ 2.89
KDSR-210	ENST00000590056	TIAM2	Q8IVF5	1701 aa		33.12	■■■□□ 2.89
KDSR-210	ENST00000590056	SP8	Q8IXZ3	490 aa		33.12	■■■□□ 2.89
KDSR-210	ENST00000590056	DICER1	Q9UPY3	1922 aa	Known RBP	33.11	■■■□□ 2.89
KDSR-210	ENST00000590056	PCCA	P05165	728 aa	Predicted RBP	33.11	■■■□□ 2.89
KDSR-210	ENST00000590056	SUPT20H	Q8NEM7	779 aa		33.11	■■■□□ 2.89
KDSR-210	ENST00000590056	ZNF428	Q96B54	188 aa		33.11	■■■□□ 2.89
KDSR-210	ENST00000590056	VPS33B	Q9H267	617 aa		33.11	■■■□□ 2.89
KDSR-210	ENST00000590056	HSPA6	P17066	643 aa		33.1	■■■□□ 2.89
KDSR-210	ENST00000590056	FSTL1	Q12841	308 aa		33.1	■■■□□ 2.89
KDSR-210	ENST00000590056	RTL5	Q5HYW3	569 aa	Predicted RBP	33.1	■■■□□ 2.89
KDSR-210	ENST00000590056	FLII	Q13045	1269 aa		33.07	■■■□□ 2.88
KDSR-210	ENST00000590056	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.07	■■■□□ 2.88
KDSR-210	ENST00000590056	SNED1	Q8TER0	1413 aa		33.07	■■■□□ 2.88
KDSR-210	ENST00000590056	IQCA1L	A6NCM1	817 aa		33.05	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms