RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 HLFQ16534 295 aa17.23■□□□□ 0.35
NEDD4L-227ENST00000590020 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
NEDD4L-227ENST00000590020 CIAPIN1Q6FI81 312 aa17.23■□□□□ 0.35
NEDD4L-227ENST00000590020 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
NEDD4L-227ENST00000590020 SAPCD2Q86UD0 394 aa17.23■□□□□ 0.35
NEDD4L-227ENST00000590020 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
NEDD4L-227ENST00000590020 ZIC5Q96T25 663 aa17.23■□□□□ 0.35
NEDD4L-227ENST00000590020 U2SURPO15042 1029 aaKnown RBP17.22■□□□□ 0.35
NEDD4L-227ENST00000590020 SOX10P56693 466 aa17.22■□□□□ 0.35
NEDD4L-227ENST00000590020 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
NEDD4L-227ENST00000590020 GLIS2Q9BZE0 524 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-227ENST00000590020 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
NEDD4L-227ENST00000590020 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
NEDD4L-227ENST00000590020 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
NEDD4L-227ENST00000590020 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-227ENST00000590020 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
NEDD4L-227ENST00000590020 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
NEDD4L-227ENST00000590020 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
NEDD4L-227ENST00000590020 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
NEDD4L-227ENST00000590020 CA12O43570 354 aa17.19■□□□□ 0.34
NEDD4L-227ENST00000590020 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
NEDD4L-227ENST00000590020 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
NEDD4L-227ENST00000590020 CRY2Q49AN0 593 aa17.18■□□□□ 0.34
NEDD4L-227ENST00000590020 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
NEDD4L-227ENST00000590020 NIM1KQ8IY84 436 aa17.18■□□□□ 0.34
NEDD4L-227ENST00000590020 PHACTR3Q96KR7 559 aa17.18■□□□□ 0.34
NEDD4L-227ENST00000590020 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
NEDD4L-227ENST00000590020 GPRC5DQ9NZD1 345 aa17.18■□□□□ 0.34
NEDD4L-227ENST00000590020 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
NEDD4L-227ENST00000590020 AOC3Q16853 763 aa17.17■□□□□ 0.34
NEDD4L-227ENST00000590020 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
NEDD4L-227ENST00000590020 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
NEDD4L-227ENST00000590020 RPGRQ92834 1020 aaKnown RBP17.17■□□□□ 0.34
NEDD4L-227ENST00000590020 PPIP5K2O43314 1243 aa17.16■□□□□ 0.34
NEDD4L-227ENST00000590020 COL3A1P02461 1466 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-227ENST00000590020 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-227ENST00000590020 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-227ENST00000590020 CC2D2BQ6DHV5 1058 aa17.15■□□□□ 0.34
NEDD4L-227ENST00000590020 MCM10Q7L590 875 aa17.15■□□□□ 0.34
NEDD4L-227ENST00000590020 PDE4DIPQ5VU43 2346 aa17.15■□□□□ 0.34
NEDD4L-227ENST00000590020 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
NEDD4L-227ENST00000590020 HIRAP54198 1017 aaPredicted RBP17.14■□□□□ 0.33
NEDD4L-227ENST00000590020 CXCL9Q07325 125 aa17.14■□□□□ 0.33
NEDD4L-227ENST00000590020 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
NEDD4L-227ENST00000590020 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
NEDD4L-227ENST00000590020 GPTP24298 496 aa17.13■□□□□ 0.33
NEDD4L-227ENST00000590020 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
NEDD4L-227ENST00000590020 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
NEDD4L-227ENST00000590020 HHIPL1Q96JK4 782 aa17.13■□□□□ 0.33
NEDD4L-227ENST00000590020 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
NEDD4L-227ENST00000590020 HUNKP57058 714 aa17.12■□□□□ 0.33
NEDD4L-227ENST00000590020 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
NEDD4L-227ENST00000590020 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
NEDD4L-227ENST00000590020 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
NEDD4L-227ENST00000590020 NUP98P52948 1817 aa17.12■□□□□ 0.33
NEDD4L-227ENST00000590020 NOGQ13253 232 aa17.11■□□□□ 0.33
NEDD4L-227ENST00000590020 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
NEDD4L-227ENST00000590020 TIMELESSQ9UNS1 1208 aa17.11■□□□□ 0.33
NEDD4L-227ENST00000590020 UBN2Q6ZU65 1347 aa17.11■□□□□ 0.33
NEDD4L-227ENST00000590020 RAD17O75943 681 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 SUSD4Q5VX71 490 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 TTLL7Q6ZT98 887 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 BCL2L13Q9BXK5 485 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
NEDD4L-227ENST00000590020 RGL2O15211 777 aa17.09■□□□□ 0.33
NEDD4L-227ENST00000590020 PRPF38BQ5VTL8 546 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-227ENST00000590020 CDC37L1Q7L3B6 337 aa17.09■□□□□ 0.33
NEDD4L-227ENST00000590020 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
NEDD4L-227ENST00000590020 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
NEDD4L-227ENST00000590020 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
NEDD4L-227ENST00000590020 FAM155AB1AL88 458 aaPredicted RBP17.08■□□□□ 0.32
NEDD4L-227ENST00000590020 TRPA1O75762 1119 aa17.08■□□□□ 0.32
NEDD4L-227ENST00000590020 GRIPAP1Q4V328 841 aa17.08■□□□□ 0.32
NEDD4L-227ENST00000590020 RSPH6AQ9H0K4 717 aa17.08■□□□□ 0.32
NEDD4L-227ENST00000590020 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
NEDD4L-227ENST00000590020 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
NEDD4L-227ENST00000590020 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
NEDD4L-227ENST00000590020 RTF1Q92541 710 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-227ENST00000590020 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-227ENST00000590020 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
NEDD4L-227ENST00000590020 MYL6BP14649 208 aa17.06■□□□□ 0.32
NEDD4L-227ENST00000590020 RGMBQ6NW40 437 aa17.06■□□□□ 0.32
NEDD4L-227ENST00000590020 RNF186Q9NXI6 227 aa17.06■□□□□ 0.32
NEDD4L-227ENST00000590020 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
NEDD4L-227ENST00000590020 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
NEDD4L-227ENST00000590020 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
NEDD4L-227ENST00000590020 NTSR2O95665 410 aa17.05■□□□□ 0.32
NEDD4L-227ENST00000590020 KIF6Q6ZMV9 814 aa17.05■□□□□ 0.32
NEDD4L-227ENST00000590020 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
NEDD4L-227ENST00000590020 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
NEDD4L-227ENST00000590020 ABCC4O15439 1325 aa17.04■□□□□ 0.32
NEDD4L-227ENST00000590020 YDJCA8MPS7 323 aa17.04■□□□□ 0.32
NEDD4L-227ENST00000590020 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
NEDD4L-227ENST00000590020 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
NEDD4L-227ENST00000590020 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
NEDD4L-227ENST00000590020 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
NEDD4L-227ENST00000590020 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms