RNA–Protein interactions for RNA: ENST00000589309.5

PRKAR1A-218, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 407 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-218ENST00000589309 PSMD1Q99460 953 aa17.09■□□□□ 0.33
PRKAR1A-218ENST00000589309 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
PRKAR1A-218ENST00000589309 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
PRKAR1A-218ENST00000589309 RIC1Q4ADV7 1423 aa17.09■□□□□ 0.33
PRKAR1A-218ENST00000589309 TNRC6CQ9HCJ0 1690 aaKnown RBP17.08■□□□□ 0.32
PRKAR1A-218ENST00000589309 GNAI1P63096 354 aa17.08■□□□□ 0.32
PRKAR1A-218ENST00000589309 TCIRG1Q13488 830 aa17.08■□□□□ 0.32
PRKAR1A-218ENST00000589309 SYNE4Q8N205 404 aa17.08■□□□□ 0.32
PRKAR1A-218ENST00000589309 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
PRKAR1A-218ENST00000589309 HYPKQ9NX55 129 aa17.08■□□□□ 0.32
PRKAR1A-218ENST00000589309 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 POTECB2RU33 542 aa17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 ANXA1P04083 346 aa17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 ZNF277Q9NRM2 450 aaPredicted RBP17.07■□□□□ 0.32
PRKAR1A-218ENST00000589309 ABCC12Q96J65 1359 aa17.06■□□□□ 0.32
PRKAR1A-218ENST00000589309 FER1L6Q2WGJ9 1857 aa17.06■□□□□ 0.32
PRKAR1A-218ENST00000589309 APAF1O14727 1248 aa17.06■□□□□ 0.32
PRKAR1A-218ENST00000589309 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
PRKAR1A-218ENST00000589309 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
PRKAR1A-218ENST00000589309 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
PRKAR1A-218ENST00000589309 BBOX1O75936 387 aa17.05■□□□□ 0.32
PRKAR1A-218ENST00000589309 DUSP27Q5VZP5 1158 aa17.05■□□□□ 0.32
PRKAR1A-218ENST00000589309 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
PRKAR1A-218ENST00000589309 PLBD2Q8NHP8 589 aa17.05■□□□□ 0.32
PRKAR1A-218ENST00000589309 VPS33BQ9H267 617 aa17.05■□□□□ 0.32
PRKAR1A-218ENST00000589309 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
PRKAR1A-218ENST00000589309 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
PRKAR1A-218ENST00000589309 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
PRKAR1A-218ENST00000589309 L3MBTL3Q96JM7 780 aaPredicted RBP17.04■□□□□ 0.32
PRKAR1A-218ENST00000589309 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
PRKAR1A-218ENST00000589309 NUP98P52948 1817 aa17.04■□□□□ 0.32
PRKAR1A-218ENST00000589309 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 ARFGEF2Q9Y6D5 1785 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 FZD9O00144 591 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 EIF6P56537 245 aaKnown RBP17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 CHADLQ6NUI6 762 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 OLFM4Q6UX06 510 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
PRKAR1A-218ENST00000589309 WDR90Q96KV7 1748 aa17.02■□□□□ 0.32
PRKAR1A-218ENST00000589309 GPC2Q8N158 579 aa17.02■□□□□ 0.32
PRKAR1A-218ENST00000589309 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.32
PRKAR1A-218ENST00000589309 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
PRKAR1A-218ENST00000589309 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
PRKAR1A-218ENST00000589309 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
PRKAR1A-218ENST00000589309 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
PRKAR1A-218ENST00000589309 PNMA8AQ86V59 439 aaPredicted RBP17.01■□□□□ 0.31
PRKAR1A-218ENST00000589309 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
PRKAR1A-218ENST00000589309 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
PRKAR1A-218ENST00000589309 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
PRKAR1A-218ENST00000589309 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
PRKAR1A-218ENST00000589309 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
PRKAR1A-218ENST00000589309 GOLGA2Q08379 1002 aa17■□□□□ 0.31
PRKAR1A-218ENST00000589309 TRIM28Q13263 835 aaKnown RBP17■□□□□ 0.31
PRKAR1A-218ENST00000589309 LDHDQ86WU2 507 aa17■□□□□ 0.31
PRKAR1A-218ENST00000589309 SP8Q8IXZ3 490 aa17■□□□□ 0.31
PRKAR1A-218ENST00000589309 TAF1DQ9H5J8 278 aaPredicted RBP17■□□□□ 0.31
PRKAR1A-218ENST00000589309 ANP32CO43423 234 aa16.99■□□□□ 0.31
PRKAR1A-218ENST00000589309 HCLS1P14317 486 aaPredicted RBP16.99■□□□□ 0.31
PRKAR1A-218ENST00000589309 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
PRKAR1A-218ENST00000589309 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
PRKAR1A-218ENST00000589309 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 ISCA1Q9BUE6 129 aa16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
PRKAR1A-218ENST00000589309 ABCC4O15439 1325 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 LMOD1P29536 600 aaPredicted RBP16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 EPHX2P34913 555 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 HTRA3P83110 453 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 GRAPQ13588 217 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 DPP8Q6V1X1 898 aaPredicted RBP16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 MPNDQ8N594 471 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 JMYQ8N9B5 988 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
PRKAR1A-218ENST00000589309 PPIP5K2O43314 1243 aa16.96■□□□□ 0.31
PRKAR1A-218ENST00000589309 EAPPQ56P03 285 aaPredicted RBP16.96■□□□□ 0.31
PRKAR1A-218ENST00000589309 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
PRKAR1A-218ENST00000589309 GJA3Q9Y6H8 435 aa16.96■□□□□ 0.31
PRKAR1A-218ENST00000589309 SNED1Q8TER0 1413 aa16.96■□□□□ 0.3
PRKAR1A-218ENST00000589309 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
PRKAR1A-218ENST00000589309 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
PRKAR1A-218ENST00000589309 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
PRKAR1A-218ENST00000589309 CREBZFQ9NS37 354 aa16.95■□□□□ 0.3
PRKAR1A-218ENST00000589309 C8orf58Q8NAV2 365 aa16.94■□□□□ 0.3
PRKAR1A-218ENST00000589309 ZNRF3Q9ULT6 936 aa16.94■□□□□ 0.3
PRKAR1A-218ENST00000589309 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
PRKAR1A-218ENST00000589309 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms