RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 C3orf67Q6ZVT6 689 aa26.81■■□□□ 1.88
MBD3-205ENST00000589064 ZNF428Q96B54 188 aa26.81■■□□□ 1.88
MBD3-205ENST00000589064 PHAXQ9H814 394 aaKnown RBP26.81■■□□□ 1.88
MBD3-205ENST00000589064 NUP98P52948 1817 aa26.81■■□□□ 1.88
MBD3-205ENST00000589064 SLC10A5Q5PT55 438 aa26.81■■□□□ 1.88
MBD3-205ENST00000589064 OLFM4Q6UX06 510 aa26.81■■□□□ 1.88
MBD3-205ENST00000589064 RPGRQ92834 1020 aaKnown RBP26.81■■□□□ 1.88
MBD3-205ENST00000589064 TAOK3Q9H2K8 898 aa26.81■■□□□ 1.88
MBD3-205ENST00000589064 SYNE4Q8N205 404 aa26.8■■□□□ 1.88
MBD3-205ENST00000589064 NLRP3Q96P20 1036 aa26.8■■□□□ 1.88
MBD3-205ENST00000589064 TRMT112Q9UI30 125 aaKnown RBP26.8■■□□□ 1.88
MBD3-205ENST00000589064 IL16Q14005 1332 aa26.79■■□□□ 1.88
MBD3-205ENST00000589064 HOXA10P31260 410 aaPredicted RBP26.79■■□□□ 1.88
MBD3-205ENST00000589064 CCDC93Q567U6 631 aa26.79■■□□□ 1.88
MBD3-205ENST00000589064 CCDC30Q5VVM6 783 aa26.79■■□□□ 1.88
MBD3-205ENST00000589064 LTBP3Q9NS15 1303 aa26.78■■□□□ 1.88
MBD3-205ENST00000589064 ATP5J2-PTCD1G3V325 749 aa26.78■■□□□ 1.88
MBD3-205ENST00000589064 RBM17Q96I25 401 aaKnown RBP26.78■■□□□ 1.88
MBD3-205ENST00000589064 SLX4Q8IY92 1834 aa26.78■■□□□ 1.88
MBD3-205ENST00000589064 KDM2BQ8NHM5 1336 aa26.78■■□□□ 1.88
MBD3-205ENST00000589064 HCLS1P14317 486 aaPredicted RBP26.77■■□□□ 1.88
MBD3-205ENST00000589064 RIC3Q7Z5B4 369 aa26.77■■□□□ 1.88
MBD3-205ENST00000589064 CHMP4AQ9BY43 222 aa26.77■■□□□ 1.88
MBD3-205ENST00000589064 WDR63Q8IWG1 891 aa26.76■■□□□ 1.87
MBD3-205ENST00000589064 ISCA1Q9BUE6 129 aa26.76■■□□□ 1.87
MBD3-205ENST00000589064 RRAGCQ9HB90 399 aa26.76■■□□□ 1.87
MBD3-205ENST00000589064 GOLGA2Q08379 1002 aa26.75■■□□□ 1.87
MBD3-205ENST00000589064 CRAMP1Q96RY5 1269 aa26.75■■□□□ 1.87
MBD3-205ENST00000589064 RIC1Q4ADV7 1423 aa26.75■■□□□ 1.87
MBD3-205ENST00000589064 RNF123Q5XPI4 1314 aa26.75■■□□□ 1.87
MBD3-205ENST00000589064 ZC3H4Q9UPT8 1303 aaKnown RBP26.75■■□□□ 1.87
MBD3-205ENST00000589064 TCERG1O14776 1098 aaKnown RBP26.74■■□□□ 1.87
MBD3-205ENST00000589064 RTKN2Q8IZC4 609 aa26.74■■□□□ 1.87
MBD3-205ENST00000589064 SH3TC1Q8TE82 1336 aa26.74■■□□□ 1.87
MBD3-205ENST00000589064 GLTPD2A6NH11 291 aa26.74■■□□□ 1.87
MBD3-205ENST00000589064 TWISTNBQ3B726 338 aaPredicted RBP26.74■■□□□ 1.87
MBD3-205ENST00000589064 FKBP4Q02790 459 aaKnown RBP eCLIP26.73■■□□□ 1.872e-6■■□□□ 13.2
MBD3-205ENST00000589064 TNRC6CQ9HCJ0 1690 aaKnown RBP26.72■■□□□ 1.87
MBD3-205ENST00000589064 TRIM28Q13263 835 aaKnown RBP26.71■■□□□ 1.87
MBD3-205ENST00000589064 FAM89AQ96GI7 184 aa26.71■■□□□ 1.87
MBD3-205ENST00000589064 ZNF277Q9NRM2 450 aaPredicted RBP26.71■■□□□ 1.87
MBD3-205ENST00000589064 SBF1O95248 1867 aa26.71■■□□□ 1.87
MBD3-205ENST00000589064 TOMM70O94826 608 aa26.7■■□□□ 1.87
MBD3-205ENST00000589064 DPY19L2Q6NUT2 758 aa26.7■■□□□ 1.87
MBD3-205ENST00000589064 FANCIQ9NVI1 1328 aa26.7■■□□□ 1.86
MBD3-205ENST00000589064 RTL5Q5HYW3 569 aaPredicted RBP26.69■■□□□ 1.86
MBD3-205ENST00000589064 SLC51AQ86UW1 340 aa26.69■■□□□ 1.86
MBD3-205ENST00000589064 MYD88Q99836 296 aa26.69■■□□□ 1.86
MBD3-205ENST00000589064 STK31Q9BXU1 1019 aa26.69■■□□□ 1.86
MBD3-205ENST00000589064 SPINK5Q9NQ38 1064 aaPredicted RBP26.69■■□□□ 1.86
MBD3-205ENST00000589064 PPEF1O14829 653 aaPredicted RBP26.68■■□□□ 1.86
MBD3-205ENST00000589064 CC2D2BQ6DHV5 1058 aa26.68■■□□□ 1.86
MBD3-205ENST00000589064 C16orf71Q8IYS4 520 aaPredicted RBP26.68■■□□□ 1.86
MBD3-205ENST00000589064 DDX58O95786 925 aaKnown RBP26.68■■□□□ 1.86
MBD3-205ENST00000589064 SLC4A2P04920 1241 aa26.67■■□□□ 1.86
MBD3-205ENST00000589064 ABCC4O15439 1325 aa26.66■■□□□ 1.86
MBD3-205ENST00000589064 EXOSC9Q06265 439 aaKnown RBP26.66■■□□□ 1.86
MBD3-205ENST00000589064 METTL22Q9BUU2 404 aaPredicted RBP26.66■■□□□ 1.86
MBD3-205ENST00000589064 FER1L6Q2WGJ9 1857 aa26.65■■□□□ 1.86
MBD3-205ENST00000589064 DDX46Q7L014 1031 aaKnown RBP26.65■■□□□ 1.86
MBD3-205ENST00000589064 G2E3Q7L622 706 aa26.65■■□□□ 1.86
MBD3-205ENST00000589064 PSMD1Q99460 953 aa26.65■■□□□ 1.86
MBD3-205ENST00000589064 MAP3K2Q9Y2U5 619 aa26.65■■□□□ 1.86
MBD3-205ENST00000589064 PI4KAP2A4QPH2 592 aa26.64■■□□□ 1.86
MBD3-205ENST00000589064 VAMP4O75379 141 aa26.64■■□□□ 1.86
MBD3-205ENST00000589064 BBOX1O75936 387 aa26.64■■□□□ 1.86
MBD3-205ENST00000589064 VEGFAP15692 232 aaPredicted RBP26.64■■□□□ 1.86
MBD3-205ENST00000589064 KSR2Q6VAB6 950 aa26.64■■□□□ 1.86
MBD3-205ENST00000589064 PI4KAP1Q8N8J0 262 aa26.64■■□□□ 1.86
MBD3-205ENST00000589064 IRS4O14654 1257 aaPredicted RBP26.63■■□□□ 1.85
MBD3-205ENST00000589064 DDNO94850 711 aaPredicted RBP26.63■■□□□ 1.85
MBD3-205ENST00000589064 IARSP41252 1262 aaKnown RBP26.63■■□□□ 1.85
MBD3-205ENST00000589064 TMX4Q9H1E5 349 aaPredicted RBP26.63■■□□□ 1.85
MBD3-205ENST00000589064 ATP6V0A2Q9Y487 856 aa26.63■■□□□ 1.85
MBD3-205ENST00000589064 POTECB2RU33 542 aa26.62■■□□□ 1.85
MBD3-205ENST00000589064 GRIPAP1Q4V328 841 aa26.62■■□□□ 1.85
MBD3-205ENST00000589064 ZBTB38Q8NAP3 1195 aaPredicted RBP26.62■■□□□ 1.85
MBD3-205ENST00000589064 CCDC191Q8NCU4 936 aa26.62■■□□□ 1.85
MBD3-205ENST00000589064 RBM46Q8TBY0 533 aaKnown RBP26.62■■□□□ 1.85
MBD3-205ENST00000589064 ARFGEF2Q9Y6D5 1785 aa26.62■■□□□ 1.85
MBD3-205ENST00000589064 CACNA1SQ13698 1873 aa26.62■■□□□ 1.85
MBD3-205ENST00000589064 HSPA6P17066 643 aa26.62■■□□□ 1.85
MBD3-205ENST00000589064 JARID2Q92833 1246 aaPredicted RBP26.62■■□□□ 1.85
MBD3-205ENST00000589064 MYH16Q9H6N6 1097 aa26.62■■□□□ 1.85
MBD3-205ENST00000589064 GRAPQ13588 217 aa26.61■■□□□ 1.85
MBD3-205ENST00000589064 SF3B3Q15393 1217 aaKnown RBP26.61■■□□□ 1.85
MBD3-205ENST00000589064 GRAPLQ8TC17 118 aaPredicted RBP26.61■■□□□ 1.85
MBD3-205ENST00000589064 CWC25Q9NXE8 425 aaPredicted RBP26.61■■□□□ 1.85
MBD3-205ENST00000589064 SNED1Q8TER0 1413 aa26.61■■□□□ 1.85
MBD3-205ENST00000589064 SP8Q8IXZ3 490 aa26.6■■□□□ 1.85
MBD3-205ENST00000589064 ANKRD36CQ5JPF3 1778 aa26.58■■□□□ 1.85
MBD3-205ENST00000589064 PCCAP05165 728 aaPredicted RBP26.58■■□□□ 1.85
MBD3-205ENST00000589064 JDP2Q8WYK2 163 aa26.58■■□□□ 1.85
MBD3-205ENST00000589064 IGKV5-2P06315 115 aa26.57■■□□□ 1.84
MBD3-205ENST00000589064 FLIIQ13045 1269 aa26.57■■□□□ 1.84
MBD3-205ENST00000589064 CCDC88AQ3V6T2 1871 aa26.57■■□□□ 1.84
MBD3-205ENST00000589064 FZD9O00144 591 aa26.56■■□□□ 1.84
MBD3-205ENST00000589064 LARGE2Q8N3Y3 721 aa26.56■■□□□ 1.84
MBD3-205ENST00000589064 ZNF521Q96K83 1311 aa26.56■■□□□ 1.84
MBD3-205ENST00000589064 ZNF541Q9H0D2 1346 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms