RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 MAP4K5Q9Y4K4 846 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 NWD1Q149M9 1564 aa11.4□□□□□ -0.58
ATG4D-210ENST00000588972 IGFBP4P22692 258 aa11.39□□□□□ -0.59
ATG4D-210ENST00000588972 SETD1AO15047 1707 aaKnown RBP11.38□□□□□ -0.59
ATG4D-210ENST00000588972 VARSP26640 1264 aaKnown RBP11.38□□□□□ -0.59
ATG4D-210ENST00000588972 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
ATG4D-210ENST00000588972 ZNF326Q5BKZ1 582 aaKnown RBP11.38□□□□□ -0.59
ATG4D-210ENST00000588972 POTEAQ6S8J7 498 aa11.38□□□□□ -0.59
ATG4D-210ENST00000588972 VASH1Q7L8A9 365 aaPredicted RBP11.38□□□□□ -0.59
ATG4D-210ENST00000588972 FBXO33Q7Z6M2 555 aa11.38□□□□□ -0.59
ATG4D-210ENST00000588972 ADGRB3O60242 1522 aa11.38□□□□□ -0.59
ATG4D-210ENST00000588972 LMTK2Q8IWU2 1503 aa11.37□□□□□ -0.59
ATG4D-210ENST00000588972 PPEF1O14829 653 aaPredicted RBP11.37□□□□□ -0.59
ATG4D-210ENST00000588972 SCNN1DP51172 638 aa11.37□□□□□ -0.59
ATG4D-210ENST00000588972 TRIM32Q13049 653 aa11.37□□□□□ -0.59
ATG4D-210ENST00000588972 TET3O43151 1660 aa11.36□□□□□ -0.59
ATG4D-210ENST00000588972 ZBTB24O43167 697 aaPredicted RBP11.36□□□□□ -0.59
ATG4D-210ENST00000588972 FOXO3O43524 673 aa11.36□□□□□ -0.59
ATG4D-210ENST00000588972 SKOR1P84550 965 aa11.36□□□□□ -0.59
ATG4D-210ENST00000588972 NAA30Q147X3 362 aaPredicted RBP11.36□□□□□ -0.59
ATG4D-210ENST00000588972 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
ATG4D-210ENST00000588972 HELQQ8TDG4 1101 aa11.36□□□□□ -0.59
ATG4D-210ENST00000588972 OSBPL3Q9H4L5 887 aa11.36□□□□□ -0.59
ATG4D-210ENST00000588972 KANK1Q14678 1352 aa11.36□□□□□ -0.59
ATG4D-210ENST00000588972 ABCC5O15440 1437 aa11.35□□□□□ -0.59
ATG4D-210ENST00000588972 DAPK1P53355 1430 aa11.35□□□□□ -0.59
ATG4D-210ENST00000588972 PHLPP1O60346 1717 aa11.35□□□□□ -0.59
ATG4D-210ENST00000588972 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
ATG4D-210ENST00000588972 KCNA6P17658 529 aa11.35□□□□□ -0.59
ATG4D-210ENST00000588972 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
ATG4D-210ENST00000588972 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
ATG4D-210ENST00000588972 ZSCAN29Q8IWY8 852 aaPredicted RBP11.35□□□□□ -0.59
ATG4D-210ENST00000588972 SCG3Q8WXD2 468 aaKnown RBP11.35□□□□□ -0.59
ATG4D-210ENST00000588972 MSH6P52701 1360 aa11.35□□□□□ -0.59
ATG4D-210ENST00000588972 WASLO00401 505 aaPredicted RBP11.34□□□□□ -0.59
ATG4D-210ENST00000588972 GDF10P55107 478 aa11.34□□□□□ -0.59
ATG4D-210ENST00000588972 WNT7BP56706 349 aa11.34□□□□□ -0.59
ATG4D-210ENST00000588972 TNS4Q8IZW8 715 aa11.34□□□□□ -0.59
ATG4D-210ENST00000588972 JCADQ9P266 1359 aa11.33□□□□□ -0.6
ATG4D-210ENST00000588972 BACH1O14867 736 aa11.33□□□□□ -0.6
ATG4D-210ENST00000588972 NPR3P17342 541 aa11.33□□□□□ -0.6
ATG4D-210ENST00000588972 VAMP1P23763 118 aa11.33□□□□□ -0.6
ATG4D-210ENST00000588972 PLA2G2CQ5R387 149 aa11.33□□□□□ -0.6
ATG4D-210ENST00000588972 COL16A1Q07092 1604 aaPredicted RBP11.32□□□□□ -0.6
ATG4D-210ENST00000588972 EPHA4P54764 986 aa11.32□□□□□ -0.6
ATG4D-210ENST00000588972 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
ATG4D-210ENST00000588972 RGL4Q8IZJ4 473 aa11.32□□□□□ -0.6
ATG4D-210ENST00000588972 SLC26A8Q96RN1 970 aa11.32□□□□□ -0.6
ATG4D-210ENST00000588972 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
ATG4D-210ENST00000588972 TMPRSS4Q9NRS4 437 aa11.32□□□□□ -0.6
ATG4D-210ENST00000588972 NOS1P29475 1434 aa11.32□□□□□ -0.6
ATG4D-210ENST00000588972 ATAD2Q6PL18 1390 aa11.31□□□□□ -0.6
ATG4D-210ENST00000588972 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
ATG4D-210ENST00000588972 INHAP05111 366 aa11.31□□□□□ -0.6
ATG4D-210ENST00000588972 TCF3P15923 654 aa11.31□□□□□ -0.6
ATG4D-210ENST00000588972 RRP7BPQ9NSQ0 103 aa11.31□□□□□ -0.6
ATG4D-210ENST00000588972 FAM13AO94988 1023 aa11.3□□□□□ -0.6
ATG4D-210ENST00000588972 IDI1Q13907 227 aa11.3□□□□□ -0.6
ATG4D-210ENST00000588972 CDK15Q96Q40 435 aa11.3□□□□□ -0.6
ATG4D-210ENST00000588972 TSPAN10Q9H1Z9 355 aaPredicted RBP11.3□□□□□ -0.6
ATG4D-210ENST00000588972 ETNK1Q9HBU6 452 aa11.3□□□□□ -0.6
ATG4D-210ENST00000588972 SERTAD1Q9UHV2 236 aa11.3□□□□□ -0.6
ATG4D-210ENST00000588972 SRCAPQ6ZRS2 3230 aa11.3□□□□□ -0.6
ATG4D-210ENST00000588972 ZFYVE9O95405 1425 aa11.29□□□□□ -0.6
ATG4D-210ENST00000588972 RRBP1Q9P2E9 1410 aaKnown RBP11.29□□□□□ -0.6
ATG4D-210ENST00000588972 FSHRP23945 695 aa11.29□□□□□ -0.6
ATG4D-210ENST00000588972 ARID5BQ14865 1188 aa11.29□□□□□ -0.6
ATG4D-210ENST00000588972 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
ATG4D-210ENST00000588972 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
ATG4D-210ENST00000588972 CHD2O14647 1828 aaKnown RBP11.29□□□□□ -0.6
ATG4D-210ENST00000588972 RPRD2Q5VT52 1461 aaKnown RBP11.29□□□□□ -0.6
ATG4D-210ENST00000588972 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
ATG4D-210ENST00000588972 PLEKHG1Q9ULL1 1385 aa11.28□□□□□ -0.6
ATG4D-210ENST00000588972 LRP6O75581 1613 aa11.28□□□□□ -0.6
ATG4D-210ENST00000588972 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
ATG4D-210ENST00000588972 MPSTP25325 297 aa11.28□□□□□ -0.6
ATG4D-210ENST00000588972 DHX9Q08211 1270 aaKnown RBP11.28□□□□□ -0.6
ATG4D-210ENST00000588972 ZNF784Q8NCA9 323 aaPredicted RBP11.28□□□□□ -0.6
ATG4D-210ENST00000588972 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
ATG4D-210ENST00000588972 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
ATG4D-210ENST00000588972 AHDC1Q5TGY3 1603 aaPredicted RBP11.27□□□□□ -0.6
ATG4D-210ENST00000588972 SHPRHQ149N8 1683 aa11.27□□□□□ -0.6
ATG4D-210ENST00000588972 ITGAEP38570 1179 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 GRM5P41594 1212 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
ATG4D-210ENST00000588972 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 RBCK1Q9BYM8 510 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 SAP130Q9H0E3 1048 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 SLC52A1Q9NWF4 448 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 MYO5BQ9ULV0 1848 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 SPATA31A6Q5VVP1 1343 aa11.27□□□□□ -0.61
ATG4D-210ENST00000588972 NCOA3Q9Y6Q9 1424 aa11.26□□□□□ -0.61
ATG4D-210ENST00000588972 ADGRL2O95490 1459 aa11.26□□□□□ -0.61
ATG4D-210ENST00000588972 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
ATG4D-210ENST00000588972 A0A1W2PRU2 124 aa11.26□□□□□ -0.61
ATG4D-210ENST00000588972 TMC7Q7Z402 723 aa11.26□□□□□ -0.61
ATG4D-210ENST00000588972 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
ATG4D-210ENST00000588972 TMEM131LA2VDJ0 1609 aa11.25□□□□□ -0.61
ATG4D-210ENST00000588972 LILRA1O75019 489 aa11.25□□□□□ -0.61
ATG4D-210ENST00000588972 FOXK2Q01167 660 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms