RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
ZNF440-206ENST00000588954 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
ZNF440-206ENST00000588954 KIF16BQ96L93 1317 aa11.75□□□□□ -0.53
ZNF440-206ENST00000588954 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
ZNF440-206ENST00000588954 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
ZNF440-206ENST00000588954 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
ZNF440-206ENST00000588954 TRIM28Q13263 835 aaKnown RBP11.74□□□□□ -0.53
ZNF440-206ENST00000588954 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
ZNF440-206ENST00000588954 FHDC1Q9C0D6 1143 aaPredicted RBP11.74□□□□□ -0.53
ZNF440-206ENST00000588954 NOB1Q9ULX3 412 aaKnown RBP11.74□□□□□ -0.53
ZNF440-206ENST00000588954 ADCY9O60503 1353 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 HSP90B1P14625 803 aaKnown RBP11.73□□□□□ -0.53
ZNF440-206ENST00000588954 NUP98P52948 1817 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 SUSD4Q5VX71 490 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 RNF123Q5XPI4 1314 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 PRR5LQ6MZQ0 368 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 SLC4A10Q6U841 1118 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 UBN2Q6ZU65 1347 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 ISCA1Q9BUE6 129 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 BRIP1Q9BX63 1249 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 API5Q9BZZ5 524 aaKnown RBP11.73□□□□□ -0.53
ZNF440-206ENST00000588954 CWC25Q9NXE8 425 aaPredicted RBP11.73□□□□□ -0.53
ZNF440-206ENST00000588954 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
ZNF440-206ENST00000588954 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
ZNF440-206ENST00000588954 IBTKQ9P2D0 1353 aaPredicted RBP11.72□□□□□ -0.53
ZNF440-206ENST00000588954 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 F6X3S4 739 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 BCAR3O75815 825 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 PDE6BP35913 854 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 TGFB2P61812 414 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 FRAT1Q92837 279 aaPredicted RBP11.72□□□□□ -0.53
ZNF440-206ENST00000588954 SYT17Q9BSW7 474 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 RCAN3Q9UKA8 241 aa11.72□□□□□ -0.53
ZNF440-206ENST00000588954 NTSR2O95665 410 aa11.71□□□□□ -0.53
ZNF440-206ENST00000588954 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
ZNF440-206ENST00000588954 SRCIN1Q9C0H9 1055 aa11.71□□□□□ -0.53
ZNF440-206ENST00000588954 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 ARFGEF2Q9Y6D5 1785 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 H0YIN7 160 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
ZNF440-206ENST00000588954 ERFEQ4G0M1 354 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 ZKSCAN2Q63HK3 967 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 ZBTB38Q8NAP3 1195 aaPredicted RBP11.7□□□□□ -0.54
ZNF440-206ENST00000588954 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
ZNF440-206ENST00000588954 PCCAP05165 728 aaPredicted RBP11.69□□□□□ -0.54
ZNF440-206ENST00000588954 IGKV5-2P06315 115 aa11.69□□□□□ -0.54
ZNF440-206ENST00000588954 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
ZNF440-206ENST00000588954 GCKRQ14397 625 aa11.69□□□□□ -0.54
ZNF440-206ENST00000588954 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
ZNF440-206ENST00000588954 ATF7IPQ6VMQ6 1270 aa11.69□□□□□ -0.54
ZNF440-206ENST00000588954 C2CD5Q86YS7 1000 aa11.69□□□□□ -0.54
ZNF440-206ENST00000588954 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.69□□□□□ -0.54
ZNF440-206ENST00000588954 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
ZNF440-206ENST00000588954 AFDNP55196 1824 aaKnown RBP11.68□□□□□ -0.54
ZNF440-206ENST00000588954 A0A0G2JLW4 131 aa11.68□□□□□ -0.54
ZNF440-206ENST00000588954 MS4A1P11836 297 aa11.68□□□□□ -0.54
ZNF440-206ENST00000588954 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
ZNF440-206ENST00000588954 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
ZNF440-206ENST00000588954 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
ZNF440-206ENST00000588954 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
ZNF440-206ENST00000588954 C9orf78Q9NZ63 289 aaPredicted RBP11.68□□□□□ -0.54
ZNF440-206ENST00000588954 ANKRD36CQ5JPF3 1778 aa11.68□□□□□ -0.54
ZNF440-206ENST00000588954 NRXN2Q9P2S2 1712 aa11.68□□□□□ -0.54
ZNF440-206ENST00000588954 IRS4O14654 1257 aaPredicted RBP11.67□□□□□ -0.54
ZNF440-206ENST00000588954 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
ZNF440-206ENST00000588954 DPEP1P16444 411 aa11.67□□□□□ -0.54
ZNF440-206ENST00000588954 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
ZNF440-206ENST00000588954 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.54
ZNF440-206ENST00000588954 MASTLQ96GX5 879 aa11.67□□□□□ -0.54
ZNF440-206ENST00000588954 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
ZNF440-206ENST00000588954 PXDNLA1KZ92 1463 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 H7C1W4 665 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 TRIM27P14373 513 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 NPR1P16066 1061 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 CHRNA5P30532 468 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 UBE3BQ7Z3V4 1068 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
ZNF440-206ENST00000588954 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 RIC1Q4ADV7 1423 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 ABCC12Q96J65 1359 aa11.66□□□□□ -0.54
ZNF440-206ENST00000588954 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.54
ZNF440-206ENST00000588954 GRM8O00222 908 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 PDE8AO60658 829 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 SRGNP10124 158 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 GPR162Q16538 588 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
ZNF440-206ENST00000588954 SYNE4Q8N205 404 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 JARID2Q92833 1246 aaPredicted RBP11.65□□□□□ -0.54
ZNF440-206ENST00000588954 CLUAP1Q96AJ1 413 aa11.65□□□□□ -0.54
ZNF440-206ENST00000588954 RBM17Q96I25 401 aaKnown RBP11.65□□□□□ -0.54
ZNF440-206ENST00000588954 KIF13BQ9NQT8 1826 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms