RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 ALDH1L1O75891 902 aa25.35■■□□□ 1.65
DNMT1-216ENST00000588952 CCT4P50991 539 aaKnown RBP25.35■■□□□ 1.65
DNMT1-216ENST00000588952 PDE3AQ14432 1141 aa25.35■■□□□ 1.65
DNMT1-216ENST00000588952 CCDC191Q8NCU4 936 aa25.35■■□□□ 1.65
DNMT1-216ENST00000588952 CWC25Q9NXE8 425 aaPredicted RBP25.35■■□□□ 1.65
DNMT1-216ENST00000588952 NTSR2O95665 410 aa25.34■■□□□ 1.65
DNMT1-216ENST00000588952 GCKRQ14397 625 aa25.34■■□□□ 1.65
DNMT1-216ENST00000588952 PARP10Q53GL7 1025 aa25.34■■□□□ 1.65
DNMT1-216ENST00000588952 JARID2Q92833 1246 aaPredicted RBP25.34■■□□□ 1.65
DNMT1-216ENST00000588952 NRXN2Q9P2S2 1712 aa25.33■■□□□ 1.65
DNMT1-216ENST00000588952 COG6Q9Y2V7 657 aa25.33■■□□□ 1.65
DNMT1-216ENST00000588952 MS4A1P11836 297 aa25.32■■□□□ 1.64
DNMT1-216ENST00000588952 SYNE4Q8N205 404 aa25.32■■□□□ 1.64
DNMT1-216ENST00000588952 IBTKQ9P2D0 1353 aaPredicted RBP25.31■■□□□ 1.64
DNMT1-216ENST00000588952 SERPINB2P05120 415 aa25.31■■□□□ 1.64
DNMT1-216ENST00000588952 ITPRIPQ8IWB1 547 aa25.31■■□□□ 1.64
DNMT1-216ENST00000588952 SGIP1Q9BQI5 828 aa25.31■■□□□ 1.64
DNMT1-216ENST00000588952 UTP14AQ9BVJ6 771 aaKnown RBP25.31■■□□□ 1.64
DNMT1-216ENST00000588952 PTGER2P43116 358 aa25.3■■□□□ 1.64
DNMT1-216ENST00000588952 MVPQ14764 893 aaKnown RBP25.3■■□□□ 1.64
DNMT1-216ENST00000588952 RTL5Q5HYW3 569 aaPredicted RBP25.3■■□□□ 1.64
DNMT1-216ENST00000588952 NBPF5PQ86XG9 351 aaPredicted RBP25.3■■□□□ 1.64
DNMT1-216ENST00000588952 NUTM1Q86Y26 1132 aa25.3■■□□□ 1.64
DNMT1-216ENST00000588952 CCDC24Q8N4L8 307 aa25.3■■□□□ 1.64
DNMT1-216ENST00000588952 USP44Q9H0E7 712 aa25.3■■□□□ 1.64
DNMT1-216ENST00000588952 ABCC12Q96J65 1359 aa25.3■■□□□ 1.64
DNMT1-216ENST00000588952 CASP7P55210 303 aa25.29■■□□□ 1.64
DNMT1-216ENST00000588952 IRX6P78412 446 aaPredicted RBP25.29■■□□□ 1.64
DNMT1-216ENST00000588952 PPP1R42Q7Z4L9 355 aa25.29■■□□□ 1.64
DNMT1-216ENST00000588952 FAM89AQ96GI7 184 aa25.29■■□□□ 1.64
DNMT1-216ENST00000588952 MEIS3Q99687 375 aa25.29■■□□□ 1.64
DNMT1-216ENST00000588952 TRMT112Q9UI30 125 aaKnown RBP25.29■■□□□ 1.64
DNMT1-216ENST00000588952 PARP3Q9Y6F1 533 aa25.29■■□□□ 1.64
DNMT1-216ENST00000588952 H7C1W4 665 aa25.28■■□□□ 1.64
DNMT1-216ENST00000588952 GRM8O00222 908 aa25.28■■□□□ 1.64
DNMT1-216ENST00000588952 PCCAP05165 728 aaPredicted RBP25.28■■□□□ 1.64
DNMT1-216ENST00000588952 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
DNMT1-216ENST00000588952 PRR5LQ6MZQ0 368 aa25.28■■□□□ 1.64
DNMT1-216ENST00000588952 ZBTB38Q8NAP3 1195 aaPredicted RBP25.28■■□□□ 1.64
DNMT1-216ENST00000588952 CRBNQ96SW2 442 aa25.28■■□□□ 1.64
DNMT1-216ENST00000588952 NBPF7P0C2Y1 421 aaPredicted RBP25.27■■□□□ 1.64
DNMT1-216ENST00000588952 UBE3BQ7Z3V4 1068 aa25.27■■□□□ 1.64
DNMT1-216ENST00000588952 UTYO14607 1347 aa25.27■■□□□ 1.64
DNMT1-216ENST00000588952 CNBD1Q8NA66 436 aa25.26■■□□□ 1.63
DNMT1-216ENST00000588952 NYXQ9GZU5 481 aa25.26■■□□□ 1.63
DNMT1-216ENST00000588952 C9orf78Q9NZ63 289 aaPredicted RBP25.26■■□□□ 1.63
DNMT1-216ENST00000588952 DDX60Q8IY21 1712 aaKnown RBP25.26■■□□□ 1.63
DNMT1-216ENST00000588952 ZBTB7BO15156 539 aaPredicted RBP25.25■■□□□ 1.63
DNMT1-216ENST00000588952 SH3TC1Q8TE82 1336 aa25.25■■□□□ 1.63
DNMT1-216ENST00000588952 TNRC6CQ9HCJ0 1690 aaKnown RBP25.25■■□□□ 1.63
DNMT1-216ENST00000588952 TPTE2Q6XPS3 522 aa25.24■■□□□ 1.63
DNMT1-216ENST00000588952 LAMB2P55268 1798 aa25.23■■□□□ 1.63
DNMT1-216ENST00000588952 HCLS1P14317 486 aaPredicted RBP25.23■■□□□ 1.63
DNMT1-216ENST00000588952 POLD1P28340 1107 aa25.23■■□□□ 1.63
DNMT1-216ENST00000588952 SUCLG2Q96I99 432 aa25.23■■□□□ 1.63
DNMT1-216ENST00000588952 SPON1Q9HCB6 807 aa25.23■■□□□ 1.63
DNMT1-216ENST00000588952 ANKRD31Q8N7Z5 1873 aa25.23■■□□□ 1.63
DNMT1-216ENST00000588952 CDHR2Q9BYE9 1310 aa25.22■■□□□ 1.63
DNMT1-216ENST00000588952 IRS4O14654 1257 aaPredicted RBP25.22■■□□□ 1.63
DNMT1-216ENST00000588952 C3orf67Q6ZVT6 689 aa25.22■■□□□ 1.63
DNMT1-216ENST00000588952 KAZALD1Q96I82 304 aa25.22■■□□□ 1.63
DNMT1-216ENST00000588952 DDX19BQ9UMR2 479 aa25.22■■□□□ 1.63
DNMT1-216ENST00000588952 C10orf71Q711Q0 1435 aa25.21■■□□□ 1.63
DNMT1-216ENST00000588952 GTF2E1P29083 439 aaPredicted RBP25.21■■□□□ 1.63
DNMT1-216ENST00000588952 EPHA10Q5JZY3 1008 aa25.2■■□□□ 1.62
DNMT1-216ENST00000588952 SLC10A5Q5PT55 438 aa25.2■■□□□ 1.62
DNMT1-216ENST00000588952 NPHP1O15259 732 aa25.19■■□□□ 1.62
DNMT1-216ENST00000588952 UBTFL1P0CB47 393 aaPredicted RBP25.19■■□□□ 1.62
DNMT1-216ENST00000588952 ST5P78524 1137 aa25.19■■□□□ 1.62
DNMT1-216ENST00000588952 EXOC6Q8TAG9 804 aa25.19■■□□□ 1.62
DNMT1-216ENST00000588952 C1orf115Q9H7X2 142 aa25.19■■□□□ 1.62
DNMT1-216ENST00000588952 RIC1Q4ADV7 1423 aa25.19■■□□□ 1.62
DNMT1-216ENST00000588952 GNAI3P08754 354 aa25.18■■□□□ 1.62
DNMT1-216ENST00000588952 ZBTB40Q9NUA8 1239 aa25.18■■□□□ 1.62
DNMT1-216ENST00000588952 LRRFIP2Q9Y608 721 aaKnown RBP25.18■■□□□ 1.62
DNMT1-216ENST00000588952 FOXO4P98177 505 aa25.17■■□□□ 1.62
DNMT1-216ENST00000588952 PLA2G12BQ9BX93 195 aa25.17■■□□□ 1.62
DNMT1-216ENST00000588952 KIF13BQ9NQT8 1826 aa25.16■■□□□ 1.62
DNMT1-216ENST00000588952 BICC1Q9H694 974 aaKnown RBP25.16■■□□□ 1.62
DNMT1-216ENST00000588952 COL11A2P13942 1736 aaPredicted RBP25.15■■□□□ 1.62
DNMT1-216ENST00000588952 PDE8AO60658 829 aa25.15■■□□□ 1.62
DNMT1-216ENST00000588952 ANKRD44Q8N8A2 993 aa25.15■■□□□ 1.62
DNMT1-216ENST00000588952 BRIP1Q9BX63 1249 aa25.15■■□□□ 1.62
DNMT1-216ENST00000588952 GNAI2P04899 355 aa25.14■■□□□ 1.62
DNMT1-216ENST00000588952 CTSWP56202 376 aa25.14■■□□□ 1.62
DNMT1-216ENST00000588952 KIAA1551Q9HCM1 1747 aa25.14■■□□□ 1.61
DNMT1-216ENST00000588952 MYH3P11055 1940 aa25.14■■□□□ 1.61
DNMT1-216ENST00000588952 KLRG2A4D1S0 409 aaPredicted RBP25.12■■□□□ 1.61
DNMT1-216ENST00000588952 CCDC85AQ96PX6 553 aaPredicted RBP25.12■■□□□ 1.61
DNMT1-216ENST00000588952 COL4A1P02462 1669 aa25.12■■□□□ 1.61
DNMT1-216ENST00000588952 RABL6Q3YEC7 729 aaPredicted RBP25.11■■□□□ 1.61
DNMT1-216ENST00000588952 TTLL11Q8NHH1 800 aa25.11■■□□□ 1.61
DNMT1-216ENST00000588952 NLRP3Q96P20 1036 aa25.11■■□□□ 1.61
DNMT1-216ENST00000588952 LRP5O75197 1615 aa25.11■■□□□ 1.61
DNMT1-216ENST00000588952 CSF1RP07333 972 aa25.1■■□□□ 1.61
DNMT1-216ENST00000588952 SF3B3Q15393 1217 aaKnown RBP25.1■■□□□ 1.61
DNMT1-216ENST00000588952 CRY2Q49AN0 593 aa25.1■■□□□ 1.61
DNMT1-216ENST00000588952 LMBR1LQ6UX01 489 aa25.1■■□□□ 1.61
DNMT1-216ENST00000588952 CHRNA5P30532 468 aa25.09■■□□□ 1.61
DNMT1-216ENST00000588952 GREM2Q9H772 168 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms