RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 PDRG1Q9NUG6 133 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 PALD1Q9ULE6 856 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 NEURL1BA8MQ27 555 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 CABP4P57796 275 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 ZC3H6P61129 1189 aaKnown RBP8.58□□□□□ -1.04
SPIDR-228ENST00000588781 XPCQ01831 940 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-228ENST00000588781 AIMP1Q12904 312 aaKnown RBP8.58□□□□□ -1.04
SPIDR-228ENST00000588781 GCKRQ14397 625 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 LRRFIP1Q32MZ4 808 aaKnown RBP8.58□□□□□ -1.04
SPIDR-228ENST00000588781 CWC27Q6UX04 472 aaKnown RBP8.58□□□□□ -1.04
SPIDR-228ENST00000588781 ANKRD13DQ6ZTN6 518 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 SUCLG2Q96I99 432 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 NGLY1Q96IV0 654 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 TTC14Q96N46 770 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 PANK2Q9BZ23 570 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 ALDH8A1Q9H2A2 487 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-228ENST00000588781 BICC1Q9H694 974 aaKnown RBP8.58□□□□□ -1.04
SPIDR-228ENST00000588781 COPRSQ9NQ92 184 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 ZDHHC9Q9Y397 364 aa8.58□□□□□ -1.04
SPIDR-228ENST00000588781 PARP4Q9UKK3 1724 aaKnown RBP8.57□□□□□ -1.04
SPIDR-228ENST00000588781 CCDC171Q6TFL3 1326 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 MAP4K4O95819 1239 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-228ENST00000588781 ANXA1P04083 346 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 ZSCAN22P10073 491 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-228ENST00000588781 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
SPIDR-228ENST00000588781 MSNP26038 577 aaKnown RBP8.57□□□□□ -1.04
SPIDR-228ENST00000588781 MCM5P33992 734 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 UVSSAQ2YD98 709 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 BRINP3Q76B58 766 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 PLBD2Q8NHP8 589 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 MYD88Q99836 296 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 FSD1Q9BTV5 496 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 UPF3BQ9BZI7 483 aaKnown RBP8.57□□□□□ -1.04
SPIDR-228ENST00000588781 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 ZSWIM6Q9HCJ5 1215 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 PKD1L3Q7Z443 1732 aa8.57□□□□□ -1.04
SPIDR-228ENST00000588781 PCDH11XQ9BZA7 1347 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 PCDH11YQ9BZA8 1340 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 KDM6AO15550 1401 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-228ENST00000588781 LAMB4A4D0S4 1761 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 ERVV-2B6SEH9 535 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 STX6O43752 255 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 ATP5JP18859 108 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 AK2P54819 239 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 PDIA6Q15084 440 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 PROSER3Q2NL68 480 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 CWF19L2Q2TBE0 894 aaKnown RBP8.56□□□□□ -1.04
SPIDR-228ENST00000588781 CCDC183Q5T5S1 534 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 BLOC1S2Q6QNY1 142 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 RUFY3Q7L099 469 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 COPS6Q7L5N1 327 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 ZSCAN30Q86W11 494 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 GAS2L3Q86XJ1 694 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 JAKMIP1Q96N16 626 aaKnown RBP8.56□□□□□ -1.04
SPIDR-228ENST00000588781 GPR108Q9NPR9 543 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 AXIN2Q9Y2T1 843 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 KIF3AQ9Y496 699 aa8.56□□□□□ -1.04
SPIDR-228ENST00000588781 U3KPZ7 1027 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-228ENST00000588781 SPATA31A3Q5VYP0 1347 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 IGKV5-2P06315 115 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
SPIDR-228ENST00000588781 MYL6BP14649 208 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 UBE2HP62256 183 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 PKP1Q13835 747 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 NECTIN1Q15223 517 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 TSGA10IPQ3SY00 556 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 RABL6Q3YEC7 729 aaPredicted RBP8.55□□□□□ -1.04
SPIDR-228ENST00000588781 CREB3L3Q68CJ9 461 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 PRPF40BQ6NWY9 871 aaKnown RBP8.55□□□□□ -1.04
SPIDR-228ENST00000588781 NOL8Q76FK4 1167 aaKnown RBP8.55□□□□□ -1.04
SPIDR-228ENST00000588781 NFATC2IPQ8NCF5 419 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 GPT2Q8TD30 523 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 MAP4K1Q92918 833 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 C8orf37Q96NL8 207 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 RRAGDQ9NQL2 400 aaPredicted RBP8.55□□□□□ -1.04
SPIDR-228ENST00000588781 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 PA2G4Q9UQ80 394 aaKnown RBP8.55□□□□□ -1.04
SPIDR-228ENST00000588781 RBM8AQ9Y5S9 174 aaKnown RBP8.55□□□□□ -1.04
SPIDR-228ENST00000588781 COL18A1P39060 1754 aa8.55□□□□□ -1.04
SPIDR-228ENST00000588781 RGPD5Q99666 1765 aa8.54□□□□□ -1.04
SPIDR-228ENST00000588781 SASH1O94885 1247 aa8.54□□□□□ -1.04
SPIDR-228ENST00000588781 F13A1P00488 732 aa8.54□□□□□ -1.04
SPIDR-228ENST00000588781 NMIQ13287 307 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-228ENST00000588781 TNNI3KQ59H18 835 aa8.54□□□□□ -1.04
SPIDR-228ENST00000588781 EAF2Q96CJ1 260 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-228ENST00000588781 ZNF496Q96IT1 587 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-228ENST00000588781 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-228ENST00000588781 ATG3Q9NT62 314 aa8.54□□□□□ -1.04
SPIDR-228ENST00000588781 FPGT-TNNI3KV9GXZ4 949 aa8.54□□□□□ -1.04
SPIDR-228ENST00000588781 MEGF6O75095 1541 aa8.54□□□□□ -1.04
SPIDR-228ENST00000588781 C5P01031 1676 aa8.53□□□□□ -1.04
SPIDR-228ENST00000588781 RPAP1Q9BWH6 1393 aaPredicted RBP8.53□□□□□ -1.04
SPIDR-228ENST00000588781 MED23Q9ULK4 1368 aa8.53□□□□□ -1.04
SPIDR-228ENST00000588781 A0A087WZG4 1122 aa8.53□□□□□ -1.04
SPIDR-228ENST00000588781 SLC27A2O14975 620 aa8.53□□□□□ -1.04
SPIDR-228ENST00000588781 SLC39A6Q13433 755 aa8.53□□□□□ -1.04
SPIDR-228ENST00000588781 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms