RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 FBXW10Q5XX13 1052 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 SDR16C5Q8N3Y7 309 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 LRRN4CLQ8ND94 238 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 PARD3BQ8TEW8 1205 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 IRX2Q9BZI1 471 aaPredicted RBP7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 KCND1Q9NSA2 647 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 LMCD1Q9NZU5 365 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 ODF2LQ9ULJ1 636 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 ABCA8O94911 1581 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 ANKRD50Q9ULJ7 1429 aa7.55□□□□□ -1.2
AP000547.3-204ENST00000588548 H3BQF6 201 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 GADD45BO75293 160 aaPredicted RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 BRD1O95696 1058 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 OATP04181 439 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 SNX1Q13596 522 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 WLSQ5T9L3 541 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 HHATQ5VTY9 493 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 CC2D1AQ6P1N0 951 aaPredicted RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 ZKSCAN4Q969J2 545 aaPredicted RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 DDX11Q96FC9 970 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 FAM163AQ96GL9 167 aaPredicted RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 USP26Q9BXU7 913 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 NUB1Q9Y5A7 615 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 ABCC10Q5T3U5 1492 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 CFAP74Q9C0B2 1584 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 A0A1B0GUA9 196 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 USP27XA6NNY8 438 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 CHUKO15111 745 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 TPD52L2O43399 206 aaKnown RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 RLBP1P12271 317 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 THUMPD2Q9BTF0 503 aaKnown RBP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 RMI1Q9H9A7 625 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 KIF9Q9HAQ2 790 aa7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.54□□□□□ -1.2
AP000547.3-204ENST00000588548 RDXP35241 583 aaKnown RBP7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 GCKP35557 465 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 LIG3P49916 1009 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 FOXD4L6Q3SYB3 417 aaPredicted RBP7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 BMP2KLQ5H9B9 411 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 CDCA2Q69YH5 1023 aaPredicted RBP7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 FOXD4L3Q6VB84 417 aaPredicted RBP7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 EXOC8Q8IYI6 725 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 C3orf20Q8ND61 904 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 CCDC34Q96HJ3 373 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 CABS1Q96KC9 395 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 PLEKHG4BQ96PX9 1271 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 UTP14AQ9BVJ6 771 aaKnown RBP7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 FUT8Q9BYC5 575 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 NRBP1Q9UHY1 535 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 SETD1BQ9UPS6 1966 aaKnown RBP7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 SMARCA5O60264 1052 aaPredicted RBP7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 PYGLP06737 847 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 PAX3P23760 479 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 ALDH1B1P30837 517 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 CCDC158Q5M9N0 1113 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 LZTS2Q9BRK4 669 aa7.53□□□□□ -1.2
AP000547.3-204ENST00000588548 ZSCAN9O15535 394 aaPredicted RBP7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 GNAI1P63096 354 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 RASA3Q14644 834 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 IQCA1Q86XH1 822 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 MYLK4Q86YV6 388 aaPredicted RBP7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 TMEM87AQ8NBN3 555 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 UBXN4Q92575 508 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 SUN2Q9UH99 717 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 PTPRGP23470 1445 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 CDC42BPAQ5VT25 1732 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 ADCY10Q96PN6 1610 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 KDM5DQ9BY66 1539 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 H7C1W4 665 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 EXOC5O00471 708 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 ERC2O15083 957 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 NEMFO60524 1076 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 ISM2Q6H9L7 571 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 CYB5RLQ6IPT4 315 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 USP48Q86UV5 1035 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 PLA2G4DQ86XP0 818 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 ZBTB10Q96DT7 871 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 AKAP2Q9Y2D5 859 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 ERCC6L2Q5T890 1561 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 CHD1O14646 1710 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 RALGAPBQ86X10 1494 aa7.52□□□□□ -1.21
AP000547.3-204ENST00000588548 ABCC2Q92887 1545 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 MAP2K7O14733 419 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 PYGBP11216 843 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 ZNF75DP51815 510 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 MFSD4BQ5TF39 518 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 TBC1D9Q6ZT07 1266 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 CCAR2Q8N163 923 aaKnown RBP7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 ATL2Q8NHH9 583 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 TBC1D5Q92609 795 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 LARP6Q9BRS8 491 aaKnown RBP7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 HOMER3Q9NSC5 361 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 VPS18Q9P253 973 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 ADGRL2O95490 1459 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 ATAD2Q6PL18 1390 aa7.51□□□□□ -1.21
AP000547.3-204ENST00000588548 TADA3O75528 432 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms