RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 MAP3K2Q9Y2U5 619 aa25.88■■□□□ 1.73
DDX39A-207ENST00000588542 TRIM28Q13263 835 aaKnown RBP25.87■■□□□ 1.73
DDX39A-207ENST00000588542 C2CD5Q86YS7 1000 aa25.87■■□□□ 1.73
DDX39A-207ENST00000588542 PELP1Q8IZL8 1130 aaKnown RBP25.87■■□□□ 1.73
DDX39A-207ENST00000588542 METTL22Q9BUU2 404 aaPredicted RBP25.87■■□□□ 1.73
DDX39A-207ENST00000588542 RIC1Q4ADV7 1423 aa25.87■■□□□ 1.73
DDX39A-207ENST00000588542 DDX60Q8IY21 1712 aaKnown RBP25.86■■□□□ 1.73
DDX39A-207ENST00000588542 GTF2E1P29083 439 aaPredicted RBP25.86■■□□□ 1.73
DDX39A-207ENST00000588542 MYD88Q99836 296 aa25.86■■□□□ 1.73
DDX39A-207ENST00000588542 UTP14AQ9BVJ6 771 aaKnown RBP25.86■■□□□ 1.73
DDX39A-207ENST00000588542 KLRG2A4D1S0 409 aaPredicted RBP25.85■■□□□ 1.73
DDX39A-207ENST00000588542 DCAF8L1A6NGE4 600 aa25.85■■□□□ 1.73
DDX39A-207ENST00000588542 H0YIN7 160 aa25.85■■□□□ 1.73
DDX39A-207ENST00000588542 MRPL50Q8N5N7 158 aaKnown RBP25.85■■□□□ 1.73
DDX39A-207ENST00000588542 ZNF428Q96B54 188 aa25.85■■□□□ 1.73
DDX39A-207ENST00000588542 PIM2Q9P1W9 311 aa25.85■■□□□ 1.73
DDX39A-207ENST00000588542 PDZRN3Q9UPQ7 1066 aa25.85■■□□□ 1.73
DDX39A-207ENST00000588542 CT47B1P0C2W7 299 aaPredicted RBP25.84■■□□□ 1.73
DDX39A-207ENST00000588542 FKBP5Q13451 457 aaPredicted RBP25.84■■□□□ 1.73
DDX39A-207ENST00000588542 SSH1Q8WYL5 1049 aa25.84■■□□□ 1.73
DDX39A-207ENST00000588542 RNF123Q5XPI4 1314 aa25.84■■□□□ 1.73
DDX39A-207ENST00000588542 CHD4Q14839 1912 aa25.83■■□□□ 1.73
DDX39A-207ENST00000588542 SYNE4Q8N205 404 aa25.83■■□□□ 1.73
DDX39A-207ENST00000588542 IGKV5-2P06315 115 aa25.82■■□□□ 1.72
DDX39A-207ENST00000588542 SRGNP10124 158 aa25.82■■□□□ 1.72
DDX39A-207ENST00000588542 ALDH1L2Q3SY69 923 aa25.82■■□□□ 1.72
DDX39A-207ENST00000588542 SLC10A5Q5PT55 438 aa25.82■■□□□ 1.72
DDX39A-207ENST00000588542 TRMT112Q9UI30 125 aaKnown RBP25.82■■□□□ 1.72
DDX39A-207ENST00000588542 SLX4Q8IY92 1834 aa25.81■■□□□ 1.72
DDX39A-207ENST00000588542 BCS1LQ9Y276 419 aa25.81■■□□□ 1.72
DDX39A-207ENST00000588542 DALRD3Q5D0E6 543 aaKnown RBP25.8■■□□□ 1.72
DDX39A-207ENST00000588542 CCDC191Q8NCU4 936 aa25.8■■□□□ 1.72
DDX39A-207ENST00000588542 DNAAF4Q8WXU2 420 aa25.8■■□□□ 1.72
DDX39A-207ENST00000588542 CRY2Q49AN0 593 aa25.79■■□□□ 1.72
DDX39A-207ENST00000588542 C3orf67Q6ZVT6 689 aa25.79■■□□□ 1.72
DDX39A-207ENST00000588542 BCL2L13Q9BXK5 485 aa25.79■■□□□ 1.72
DDX39A-207ENST00000588542 SH3TC1Q8TE82 1336 aa25.79■■□□□ 1.72
DDX39A-207ENST00000588542 F6X3S4 739 aa25.78■■□□□ 1.72
DDX39A-207ENST00000588542 GRIN3BO60391 1043 aa25.78■■□□□ 1.72
DDX39A-207ENST00000588542 STYK1Q6J9G0 422 aa25.78■■□□□ 1.72
DDX39A-207ENST00000588542 TTLL6Q8N841 843 aa25.78■■□□□ 1.72
DDX39A-207ENST00000588542 ZNF622Q969S3 477 aaKnown RBP eCLIP25.78■■□□□ 1.721e-9■□□□□ 10.9
DDX39A-207ENST00000588542 FAM89AQ96GI7 184 aa25.78■■□□□ 1.72
DDX39A-207ENST00000588542 MASTLQ96GX5 879 aa25.78■■□□□ 1.72
DDX39A-207ENST00000588542 HCLS1P14317 486 aaPredicted RBP25.77■■□□□ 1.72
DDX39A-207ENST00000588542 NEXNQ0ZGT2 675 aa25.77■■□□□ 1.72
DDX39A-207ENST00000588542 CWF19L2Q2TBE0 894 aaKnown RBP25.77■■□□□ 1.72
DDX39A-207ENST00000588542 CWC25Q9NXE8 425 aaPredicted RBP25.77■■□□□ 1.72
DDX39A-207ENST00000588542 NEURL1BA8MQ27 555 aa25.76■■□□□ 1.71
DDX39A-207ENST00000588542 NPR1P16066 1061 aa25.76■■□□□ 1.71
DDX39A-207ENST00000588542 RARSP54136 660 aaKnown RBP25.76■■□□□ 1.71
DDX39A-207ENST00000588542 SMC4Q9NTJ3 1288 aa25.76■■□□□ 1.71
DDX39A-207ENST00000588542 ZBTB38Q8NAP3 1195 aaPredicted RBP25.75■■□□□ 1.71
DDX39A-207ENST00000588542 TAF1P21675 1872 aa25.74■■□□□ 1.71
DDX39A-207ENST00000588542 PCCAP05165 728 aaPredicted RBP25.74■■□□□ 1.71
DDX39A-207ENST00000588542 RTL5Q5HYW3 569 aaPredicted RBP25.74■■□□□ 1.71
DDX39A-207ENST00000588542 NLRP3Q96P20 1036 aa25.74■■□□□ 1.71
DDX39A-207ENST00000588542 MYH3P11055 1940 aa25.74■■□□□ 1.71
DDX39A-207ENST00000588542 PTPRCP08575 1304 aa25.73■■□□□ 1.71
DDX39A-207ENST00000588542 BRPF1P55201 1214 aaPredicted RBP25.73■■□□□ 1.71
DDX39A-207ENST00000588542 BEND3Q5T5X7 828 aa25.73■■□□□ 1.71
DDX39A-207ENST00000588542 LINS1Q8NG48 757 aa25.73■■□□□ 1.71
DDX39A-207ENST00000588542 CNKSR1Q969H4 720 aa25.73■■□□□ 1.71
DDX39A-207ENST00000588542 HOXA10P31260 410 aaPredicted RBP25.72■■□□□ 1.71
DDX39A-207ENST00000588542 JARID2Q92833 1246 aaPredicted RBP25.72■■□□□ 1.71
DDX39A-207ENST00000588542 FER1L6Q2WGJ9 1857 aa25.72■■□□□ 1.71
DDX39A-207ENST00000588542 IRS4O14654 1257 aaPredicted RBP25.71■■□□□ 1.71
DDX39A-207ENST00000588542 GCKRQ14397 625 aa25.71■■□□□ 1.71
DDX39A-207ENST00000588542 PRPF40BQ6NWY9 871 aaKnown RBP25.71■■□□□ 1.71
DDX39A-207ENST00000588542 SBF1O95248 1867 aa25.7■■□□□ 1.71
DDX39A-207ENST00000588542 RPGRQ92834 1020 aaKnown RBP25.69■■□□□ 1.7
DDX39A-207ENST00000588542 CCDC88AQ3V6T2 1871 aa25.68■■□□□ 1.7
DDX39A-207ENST00000588542 CDHR2Q9BYE9 1310 aa25.68■■□□□ 1.7
DDX39A-207ENST00000588542 H7C1W4 665 aa25.68■■□□□ 1.7
DDX39A-207ENST00000588542 ALDH1B1P30837 517 aa25.68■■□□□ 1.7
DDX39A-207ENST00000588542 C7orf43Q8WVR3 580 aa25.68■■□□□ 1.7
DDX39A-207ENST00000588542 CRAMP1Q96RY5 1269 aa25.68■■□□□ 1.7
DDX39A-207ENST00000588542 NOB1Q9ULX3 412 aaKnown RBP25.68■■□□□ 1.7
DDX39A-207ENST00000588542 SLC4A10Q6U841 1118 aa25.67■■□□□ 1.7
DDX39A-207ENST00000588542 ARHGAP27Q6ZUM4 889 aa25.67■■□□□ 1.7
DDX39A-207ENST00000588542 RBM17Q96I25 401 aaKnown RBP25.67■■□□□ 1.7
DDX39A-207ENST00000588542 C21orf2O43822 256 aa25.66■■□□□ 1.7
DDX39A-207ENST00000588542 CASP7P55210 303 aa25.66■■□□□ 1.7
DDX39A-207ENST00000588542 SF3B3Q15393 1217 aaKnown RBP25.66■■□□□ 1.7
DDX39A-207ENST00000588542 ZNF219Q9P2Y4 722 aaPredicted RBP25.66■■□□□ 1.7
DDX39A-207ENST00000588542 COL4A1P02462 1669 aa25.66■■□□□ 1.7
DDX39A-207ENST00000588542 BCAR3O75815 825 aa25.65■■□□□ 1.7
DDX39A-207ENST00000588542 UBE3BQ7Z3V4 1068 aa25.65■■□□□ 1.7
DDX39A-207ENST00000588542 ABCC4O15439 1325 aa25.64■■□□□ 1.7
DDX39A-207ENST00000588542 PDE8AO60658 829 aa25.64■■□□□ 1.7
DDX39A-207ENST00000588542 SRCIN1Q9C0H9 1055 aa25.64■■□□□ 1.7
DDX39A-207ENST00000588542 ALDH1L1O75891 902 aa25.63■■□□□ 1.69
DDX39A-207ENST00000588542 HSP90B1P14625 803 aaKnown RBP25.63■■□□□ 1.69
DDX39A-207ENST00000588542 KIF16BQ96L93 1317 aa25.63■■□□□ 1.69
DDX39A-207ENST00000588542 OLFM4Q6UX06 510 aa25.62■■□□□ 1.69
DDX39A-207ENST00000588542 NFKBIEO00221 500 aa25.61■■□□□ 1.69
DDX39A-207ENST00000588542 DDX46Q7L014 1031 aaKnown RBP25.61■■□□□ 1.69
DDX39A-207ENST00000588542 SLC51AQ86UW1 340 aa25.61■■□□□ 1.69
DDX39A-207ENST00000588542 SNED1Q8TER0 1413 aa25.61■■□□□ 1.69
DDX39A-207ENST00000588542 RASSF7Q02833 373 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms