RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 CCDC30Q5VVM6 783 aa12.85□□□□□ -0.35
CNN1-207ENST00000588468 NLRP10Q86W26 655 aa12.85□□□□□ -0.35
CNN1-207ENST00000588468 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
CNN1-207ENST00000588468 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
CNN1-207ENST00000588468 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
CNN1-207ENST00000588468 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
CNN1-207ENST00000588468 C21orf2O43822 256 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 ALDH1B1P30837 517 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 CCDC93Q567U6 631 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 RPGRQ92834 1020 aaKnown RBP12.84□□□□□ -0.35
CNN1-207ENST00000588468 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
CNN1-207ENST00000588468 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 MYH3P11055 1940 aa12.84□□□□□ -0.35
CNN1-207ENST00000588468 SNED1Q8TER0 1413 aa12.83□□□□□ -0.36
CNN1-207ENST00000588468 HOXA10P31260 410 aaPredicted RBP12.83□□□□□ -0.36
CNN1-207ENST00000588468 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
CNN1-207ENST00000588468 FAM9BQ8IZU0 186 aa12.83□□□□□ -0.36
CNN1-207ENST00000588468 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
CNN1-207ENST00000588468 C7orf43Q8WVR3 580 aa12.83□□□□□ -0.36
CNN1-207ENST00000588468 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
CNN1-207ENST00000588468 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
CNN1-207ENST00000588468 ELL2O00472 640 aaPredicted RBP12.82□□□□□ -0.36
CNN1-207ENST00000588468 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
CNN1-207ENST00000588468 C1QTNF8P60827 252 aa12.82□□□□□ -0.36
CNN1-207ENST00000588468 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
CNN1-207ENST00000588468 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
CNN1-207ENST00000588468 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
CNN1-207ENST00000588468 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
CNN1-207ENST00000588468 STK31Q9BXU1 1019 aa12.82□□□□□ -0.36
CNN1-207ENST00000588468 TRIM28Q13263 835 aaKnown RBP12.81□□□□□ -0.36
CNN1-207ENST00000588468 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
CNN1-207ENST00000588468 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
CNN1-207ENST00000588468 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
CNN1-207ENST00000588468 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
CNN1-207ENST00000588468 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
CNN1-207ENST00000588468 TRMT112Q9UI30 125 aaKnown RBP12.81□□□□□ -0.36
CNN1-207ENST00000588468 PRELPP51888 382 aa12.8□□□□□ -0.36
CNN1-207ENST00000588468 FKBP4Q02790 459 aaKnown RBP eCLIP12.8□□□□□ -0.36
CNN1-207ENST00000588468 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
CNN1-207ENST00000588468 RTKN2Q8IZC4 609 aa12.8□□□□□ -0.36
CNN1-207ENST00000588468 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
CNN1-207ENST00000588468 CEP350Q5VT06 3117 aa12.8□□□□□ -0.36
CNN1-207ENST00000588468 SCN4AP35499 1836 aa12.79□□□□□ -0.36
CNN1-207ENST00000588468 TAF1P21675 1872 aa12.79□□□□□ -0.36
CNN1-207ENST00000588468 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
CNN1-207ENST00000588468 KIF3CO14782 793 aa12.79□□□□□ -0.36
CNN1-207ENST00000588468 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
CNN1-207ENST00000588468 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
CNN1-207ENST00000588468 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
CNN1-207ENST00000588468 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
CNN1-207ENST00000588468 HSP90B1P14625 803 aaKnown RBP12.78□□□□□ -0.36
CNN1-207ENST00000588468 PSMD1Q99460 953 aa12.78□□□□□ -0.36
CNN1-207ENST00000588468 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
CNN1-207ENST00000588468 GLTPD2A6NH11 291 aa12.77□□□□□ -0.37
CNN1-207ENST00000588468 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
CNN1-207ENST00000588468 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
CNN1-207ENST00000588468 CCDC191Q8NCU4 936 aa12.77□□□□□ -0.37
CNN1-207ENST00000588468 METTL22Q9BUU2 404 aaPredicted RBP12.77□□□□□ -0.37
CNN1-207ENST00000588468 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
CNN1-207ENST00000588468 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.37
CNN1-207ENST00000588468 ABCC4O15439 1325 aa12.77□□□□□ -0.37
CNN1-207ENST00000588468 LTBP1Q14766 1721 aa12.76□□□□□ -0.37
CNN1-207ENST00000588468 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
CNN1-207ENST00000588468 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
CNN1-207ENST00000588468 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
CNN1-207ENST00000588468 MYD88Q99836 296 aa12.76□□□□□ -0.37
CNN1-207ENST00000588468 TMX4Q9H1E5 349 aaPredicted RBP12.76□□□□□ -0.37
CNN1-207ENST00000588468 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
CNN1-207ENST00000588468 BBOX1O75936 387 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 TOMM70O94826 608 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 PCCAP05165 728 aaPredicted RBP12.75□□□□□ -0.37
CNN1-207ENST00000588468 IARSP41252 1262 aaKnown RBP12.75□□□□□ -0.37
CNN1-207ENST00000588468 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
CNN1-207ENST00000588468 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 GRAPQ13588 217 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
CNN1-207ENST00000588468 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 C16orf71Q8IYS4 520 aaPredicted RBP12.75□□□□□ -0.37
CNN1-207ENST00000588468 SYNE4Q8N205 404 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 ZBTB38Q8NAP3 1195 aaPredicted RBP12.75□□□□□ -0.37
CNN1-207ENST00000588468 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
CNN1-207ENST00000588468 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 ATP6V0A2Q9Y487 856 aa12.75□□□□□ -0.37
CNN1-207ENST00000588468 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
CNN1-207ENST00000588468 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
CNN1-207ENST00000588468 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
CNN1-207ENST00000588468 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
CNN1-207ENST00000588468 VAMP4O75379 141 aa12.74□□□□□ -0.37
CNN1-207ENST00000588468 SLC4A2P04920 1241 aa12.74□□□□□ -0.37
CNN1-207ENST00000588468 FLIIQ13045 1269 aa12.74□□□□□ -0.37
CNN1-207ENST00000588468 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
CNN1-207ENST00000588468 RBM46Q8TBY0 533 aaKnown RBP12.74□□□□□ -0.37
CNN1-207ENST00000588468 FAM89AQ96GI7 184 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms