RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 RTKN2Q8IZC4 609 aa28.28■■■□□ 2.12
CIRBP-219ENST00000588411 C7orf43Q8WVR3 580 aa28.28■■■□□ 2.12
CIRBP-219ENST00000588411 HSPA6P17066 643 aa28.27■■■□□ 2.12
CIRBP-219ENST00000588411 DPY19L2Q6NUT2 758 aa28.27■■■□□ 2.12
CIRBP-219ENST00000588411 CHMP4AQ9BY43 222 aa28.27■■■□□ 2.12
CIRBP-219ENST00000588411 HYPKQ9NX55 129 aa28.27■■■□□ 2.12
CIRBP-219ENST00000588411 FER1L6Q2WGJ9 1857 aa28.26■■■□□ 2.11
CIRBP-219ENST00000588411 RRAGCQ9HB90 399 aa28.26■■■□□ 2.11
CIRBP-219ENST00000588411 TCIRG1Q13488 830 aa28.25■■■□□ 2.11
CIRBP-219ENST00000588411 RBM46Q8TBY0 533 aaKnown RBP28.25■■■□□ 2.11
CIRBP-219ENST00000588411 RBM17Q96I25 401 aaKnown RBP28.25■■■□□ 2.11
CIRBP-219ENST00000588411 NLRP3Q96P20 1036 aa28.25■■■□□ 2.11
CIRBP-219ENST00000588411 CACNA1SQ13698 1873 aa28.25■■■□□ 2.11
CIRBP-219ENST00000588411 TNRC6CQ9HCJ0 1690 aaKnown RBP28.24■■■□□ 2.11
CIRBP-219ENST00000588411 HOXA10P31260 410 aaPredicted RBP28.24■■■□□ 2.11
CIRBP-219ENST00000588411 PLBD2Q8NHP8 589 aa28.24■■■□□ 2.11
CIRBP-219ENST00000588411 TIAM2Q8IVF5 1701 aa28.23■■■□□ 2.11
CIRBP-219ENST00000588411 FKBP4Q02790 459 aaKnown RBP eCLIP28.23■■■□□ 2.11
CIRBP-219ENST00000588411 CC2D2BQ6DHV5 1058 aa28.23■■■□□ 2.11
CIRBP-219ENST00000588411 ANKRD13DQ6ZTN6 518 aa28.23■■■□□ 2.11
CIRBP-219ENST00000588411 VEGFAP15692 232 aaPredicted RBP28.22■■■□□ 2.11
CIRBP-219ENST00000588411 CCDC27Q2M243 656 aa28.22■■■□□ 2.11
CIRBP-219ENST00000588411 NLRP10Q86W26 655 aa28.22■■■□□ 2.11
CIRBP-219ENST00000588411 SLC10A5Q5PT55 438 aa28.21■■■□□ 2.11
CIRBP-219ENST00000588411 CRAMP1Q96RY5 1269 aa28.21■■■□□ 2.11
CIRBP-219ENST00000588411 GRIPAP1Q4V328 841 aa28.2■■■□□ 2.1
CIRBP-219ENST00000588411 TRMT112Q9UI30 125 aaKnown RBP28.2■■■□□ 2.1
CIRBP-219ENST00000588411 CCDC88AQ3V6T2 1871 aa28.19■■■□□ 2.1
CIRBP-219ENST00000588411 FSTL1Q12841 308 aa28.19■■■□□ 2.1
CIRBP-219ENST00000588411 TMX4Q9H1E5 349 aaPredicted RBP28.19■■■□□ 2.1
CIRBP-219ENST00000588411 SH3TC1Q8TE82 1336 aa28.18■■■□□ 2.1
CIRBP-219ENST00000588411 ELL2O00472 640 aaPredicted RBP28.18■■■□□ 2.1
CIRBP-219ENST00000588411 GOLGA2Q08379 1002 aa28.18■■■□□ 2.1
CIRBP-219ENST00000588411 NCBP3Q53F19 620 aaKnown RBP28.18■■■□□ 2.1
CIRBP-219ENST00000588411 ANKRD36CQ5JPF3 1778 aa28.17■■■□□ 2.1
CIRBP-219ENST00000588411 OLFM4Q6UX06 510 aa28.17■■■□□ 2.1
CIRBP-219ENST00000588411 ZNF277Q9NRM2 450 aaPredicted RBP28.17■■■□□ 2.1
CIRBP-219ENST00000588411 DICER1Q9UPY3 1922 aaKnown RBP28.16■■■□□ 2.1
CIRBP-219ENST00000588411 PPEF1O14829 653 aaPredicted RBP28.16■■■□□ 2.1
CIRBP-219ENST00000588411 APLP1P51693 650 aa28.16■■■□□ 2.1
CIRBP-219ENST00000588411 CCDC30Q5VVM6 783 aa28.16■■■□□ 2.1
CIRBP-219ENST00000588411 C3orf67Q6ZVT6 689 aa28.16■■■□□ 2.1
CIRBP-219ENST00000588411 WWC1Q8IX03 1113 aa28.16■■■□□ 2.1
CIRBP-219ENST00000588411 PSMD1Q99460 953 aa28.16■■■□□ 2.1
CIRBP-219ENST00000588411 SYNE4Q8N205 404 aa28.15■■■□□ 2.1
CIRBP-219ENST00000588411 C8orf58Q8NAV2 365 aa28.15■■■□□ 2.1
CIRBP-219ENST00000588411 SMC1BQ8NDV3 1235 aa28.15■■■□□ 2.1
CIRBP-219ENST00000588411 RIC3Q7Z5B4 369 aa28.14■■■□□ 2.1
CIRBP-219ENST00000588411 HCLS1P14317 486 aaPredicted RBP28.13■■■□□ 2.09
CIRBP-219ENST00000588411 IARSP41252 1262 aaKnown RBP28.13■■■□□ 2.09
CIRBP-219ENST00000588411 ISCA1Q9BUE6 129 aa28.13■■■□□ 2.09
CIRBP-219ENST00000588411 IL16Q14005 1332 aa28.13■■■□□ 2.09
CIRBP-219ENST00000588411 ATP5J2-PTCD1G3V325 749 aa28.11■■■□□ 2.09
CIRBP-219ENST00000588411 DDX58O95786 925 aaKnown RBP28.11■■■□□ 2.09
CIRBP-219ENST00000588411 DDX46Q7L014 1031 aaKnown RBP28.11■■■□□ 2.09
CIRBP-219ENST00000588411 TSR2Q969E8 191 aaKnown RBP28.11■■■□□ 2.09
CIRBP-219ENST00000588411 WDR90Q96KV7 1748 aa28.1■■■□□ 2.09
CIRBP-219ENST00000588411 TRIM28Q13263 835 aaKnown RBP28.1■■■□□ 2.09
CIRBP-219ENST00000588411 JDP2Q8WYK2 163 aa28.1■■■□□ 2.09
CIRBP-219ENST00000588411 ABCC4O15439 1325 aa28.1■■■□□ 2.09
CIRBP-219ENST00000588411 TCERG1O14776 1098 aaKnown RBP28.09■■■□□ 2.09
CIRBP-219ENST00000588411 BBOX1O75936 387 aa28.09■■■□□ 2.09
CIRBP-219ENST00000588411 DDNO94850 711 aaPredicted RBP28.09■■■□□ 2.09
CIRBP-219ENST00000588411 STK31Q9BXU1 1019 aa28.09■■■□□ 2.09
CIRBP-219ENST00000588411 PHAXQ9H814 394 aaKnown RBP28.09■■■□□ 2.09
CIRBP-219ENST00000588411 ATP6V0A2Q9Y487 856 aa28.09■■■□□ 2.09
CIRBP-219ENST00000588411 IQCA1LA6NCM1 817 aa28.08■■■□□ 2.09
CIRBP-219ENST00000588411 SNED1Q8TER0 1413 aa28.08■■■□□ 2.09
CIRBP-219ENST00000588411 CEP350Q5VT06 3117 aa28.07■■■□□ 2.08
CIRBP-219ENST00000588411 HSP90B1P14625 803 aaKnown RBP28.07■■■□□ 2.08
CIRBP-219ENST00000588411 TSPYL6Q8N831 410 aa28.07■■■□□ 2.08
CIRBP-219ENST00000588411 FAM89AQ96GI7 184 aa28.06■■■□□ 2.08
CIRBP-219ENST00000588411 POTECB2RU33 542 aa28.05■■■□□ 2.08
CIRBP-219ENST00000588411 GRAPQ13588 217 aa28.05■■■□□ 2.08
CIRBP-219ENST00000588411 TWISTNBQ3B726 338 aaPredicted RBP28.05■■■□□ 2.08
CIRBP-219ENST00000588411 TMC4Q7Z404 712 aa28.05■■■□□ 2.08
CIRBP-219ENST00000588411 WDR63Q8IWG1 891 aa28.05■■■□□ 2.08
CIRBP-219ENST00000588411 GRAPLQ8TC17 118 aaPredicted RBP28.05■■■□□ 2.08
CIRBP-219ENST00000588411 ZNF428Q96B54 188 aa28.05■■■□□ 2.08
CIRBP-219ENST00000588411 L3MBTL3Q96JM7 780 aaPredicted RBP28.05■■■□□ 2.08
CIRBP-219ENST00000588411 FZD9O00144 591 aa28.04■■■□□ 2.08
CIRBP-219ENST00000588411 LARGE2Q8N3Y3 721 aa28.04■■■□□ 2.08
CIRBP-219ENST00000588411 SUPT20HQ8NEM7 779 aa28.04■■■□□ 2.08
CIRBP-219ENST00000588411 MYD88Q99836 296 aa28.04■■■□□ 2.08
CIRBP-219ENST00000588411 ZNF541Q9H0D2 1346 aa28.03■■■□□ 2.08
CIRBP-219ENST00000588411 EIF6P56537 245 aaKnown RBP28.03■■■□□ 2.08
CIRBP-219ENST00000588411 SP8Q8IXZ3 490 aa28.03■■■□□ 2.08
CIRBP-219ENST00000588411 FAM9BQ8IZU0 186 aa28.03■■■□□ 2.08
CIRBP-219ENST00000588411 SALL2Q9Y467 1007 aaPredicted RBP28.03■■■□□ 2.08
CIRBP-219ENST00000588411 IRS4O14654 1257 aaPredicted RBP28.02■■■□□ 2.08
CIRBP-219ENST00000588411 ZBTB38Q8NAP3 1195 aaPredicted RBP28.02■■■□□ 2.08
CIRBP-219ENST00000588411 CCDC191Q8NCU4 936 aa28.02■■■□□ 2.08
CIRBP-219ENST00000588411 VPS33BQ9H267 617 aa28.02■■■□□ 2.08
CIRBP-219ENST00000588411 SF3B3Q15393 1217 aaKnown RBP28.01■■■□□ 2.07
CIRBP-219ENST00000588411 RTL5Q5HYW3 569 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-219ENST00000588411 DPP8Q6V1X1 898 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-219ENST00000588411 METTL22Q9BUU2 404 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-219ENST00000588411 FANCIQ9NVI1 1328 aa28■■■□□ 2.07
CIRBP-219ENST00000588411 PPIP5K2O43314 1243 aa28■■■□□ 2.07
CIRBP-219ENST00000588411 NIM1KQ8IY84 436 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms