RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 PARP4Q9UKK3 1724 aaKnown RBP16.76■□□□□ 0.27
CNTD1-204ENST00000588408 A1BGP04217 495 aa16.76■□□□□ 0.27
CNTD1-204ENST00000588408 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
CNTD1-204ENST00000588408 KLHL40Q2TBA0 621 aa16.76■□□□□ 0.27
CNTD1-204ENST00000588408 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
CNTD1-204ENST00000588408 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
CNTD1-204ENST00000588408 A0A087WZG4 1122 aa16.75■□□□□ 0.27
CNTD1-204ENST00000588408 AK2P54819 239 aa16.75■□□□□ 0.27
CNTD1-204ENST00000588408 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
CNTD1-204ENST00000588408 NMIQ13287 307 aaPredicted RBP16.75■□□□□ 0.27
CNTD1-204ENST00000588408 FOXD4L6Q3SYB3 417 aaPredicted RBP16.75■□□□□ 0.27
CNTD1-204ENST00000588408 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
CNTD1-204ENST00000588408 FOXD4L3Q6VB84 417 aaPredicted RBP16.75■□□□□ 0.27
CNTD1-204ENST00000588408 GPATCH3Q96I76 525 aa16.75■□□□□ 0.27
CNTD1-204ENST00000588408 TTC14Q96N46 770 aa16.75■□□□□ 0.27
CNTD1-204ENST00000588408 NSFL1CQ9UNZ2 370 aaKnown RBP16.75■□□□□ 0.27
CNTD1-204ENST00000588408 SOS2Q07890 1332 aaPredicted RBP16.75■□□□□ 0.27
CNTD1-204ENST00000588408 MRE11P49959 708 aa16.75■□□□□ 0.27
CNTD1-204ENST00000588408 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
CNTD1-204ENST00000588408 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
CNTD1-204ENST00000588408 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 CHGBP05060 677 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 TFCP2Q12800 502 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 TCHHQ07283 1943 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 PCDH11XQ9BZA7 1347 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 PCDH11YQ9BZA8 1340 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 A0A0D9SFI3 127 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 LARGE1O95461 756 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 BRD1O95696 1058 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 PTMSP20962 102 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 CASP7P55210 303 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
CNTD1-204ENST00000588408 RUFY3Q7L099 469 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
CNTD1-204ENST00000588408 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
CNTD1-204ENST00000588408 EPB41L2O43491 1005 aaKnown RBP16.73■□□□□ 0.27
CNTD1-204ENST00000588408 CASTP20810 708 aaKnown RBP16.73■□□□□ 0.27
CNTD1-204ENST00000588408 PLBD2Q8NHP8 589 aa16.73■□□□□ 0.27
CNTD1-204ENST00000588408 DBNLQ9UJU6 430 aaKnown RBP16.73■□□□□ 0.27
CNTD1-204ENST00000588408 CCDC9Q9Y3X0 531 aaKnown RBP16.73■□□□□ 0.27
CNTD1-204ENST00000588408 KCPQ6ZWJ8 1503 aa16.72■□□□□ 0.27
CNTD1-204ENST00000588408 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
CNTD1-204ENST00000588408 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
CNTD1-204ENST00000588408 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
CNTD1-204ENST00000588408 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
CNTD1-204ENST00000588408 ZBTB3Q9H5J0 574 aa16.72■□□□□ 0.27
CNTD1-204ENST00000588408 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.27
CNTD1-204ENST00000588408 IL2RBP14784 551 aa16.71■□□□□ 0.27
CNTD1-204ENST00000588408 LMBR1LQ6UX01 489 aa16.71■□□□□ 0.27
CNTD1-204ENST00000588408 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
CNTD1-204ENST00000588408 JAKMIP1Q96N16 626 aaKnown RBP16.71■□□□□ 0.27
CNTD1-204ENST00000588408 FSD1Q9BTV5 496 aa16.71■□□□□ 0.27
CNTD1-204ENST00000588408 CCDC171Q6TFL3 1326 aa16.71■□□□□ 0.27
CNTD1-204ENST00000588408 KDM4FA0A1W2PPD8 638 aa16.71■□□□□ 0.26
CNTD1-204ENST00000588408 NECTIN1Q15223 517 aa16.71■□□□□ 0.26
CNTD1-204ENST00000588408 TNNI3KQ59H18 835 aa16.71■□□□□ 0.26
CNTD1-204ENST00000588408 RRAGDQ9NQL2 400 aaPredicted RBP16.71■□□□□ 0.26
CNTD1-204ENST00000588408 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.26
CNTD1-204ENST00000588408 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.26
CNTD1-204ENST00000588408 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.26
CNTD1-204ENST00000588408 TOGARAM1Q9Y4F4 1720 aa16.71■□□□□ 0.26
CNTD1-204ENST00000588408 FOXO4P98177 505 aa16.7■□□□□ 0.26
CNTD1-204ENST00000588408 TJP1Q07157 1748 aa16.7■□□□□ 0.26
CNTD1-204ENST00000588408 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
CNTD1-204ENST00000588408 RPAP1Q9BWH6 1393 aaPredicted RBP16.7■□□□□ 0.26
CNTD1-204ENST00000588408 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
CNTD1-204ENST00000588408 DBNDD2Q9BQY9 259 aa16.7■□□□□ 0.26
CNTD1-204ENST00000588408 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
CNTD1-204ENST00000588408 ERVV-2B6SEH9 535 aa16.69■□□□□ 0.26
CNTD1-204ENST00000588408 ZSCAN23Q3MJ62 389 aa16.69■□□□□ 0.26
CNTD1-204ENST00000588408 CARD10Q9BWT7 1032 aa16.69■□□□□ 0.26
CNTD1-204ENST00000588408 PAPPAQ13219 1627 aa16.69■□□□□ 0.26
CNTD1-204ENST00000588408 EVA1CP58658 441 aa16.69■□□□□ 0.26
CNTD1-204ENST00000588408 CREB3L3Q68CJ9 461 aa16.69■□□□□ 0.26
CNTD1-204ENST00000588408 KAT6BQ8WYB5 2073 aa16.68■□□□□ 0.26
CNTD1-204ENST00000588408 NKX1-1Q15270 411 aaPredicted RBP16.68■□□□□ 0.26
CNTD1-204ENST00000588408 TCEANC2Q96MN5 208 aa16.68■□□□□ 0.26
CNTD1-204ENST00000588408 LIMCH1Q9UPQ0 1083 aa16.68■□□□□ 0.26
CNTD1-204ENST00000588408 COL15A1P39059 1388 aa16.68■□□□□ 0.26
CNTD1-204ENST00000588408 H7C1W4 665 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 KCNB2Q92953 911 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
CNTD1-204ENST00000588408 ZNF330Q9Y3S2 320 aaPredicted RBP16.67■□□□□ 0.26
CNTD1-204ENST00000588408 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
CNTD1-204ENST00000588408 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
CNTD1-204ENST00000588408 KCNJ4P48050 445 aa16.66■□□□□ 0.26
CNTD1-204ENST00000588408 CCDC83Q8IWF9 413 aa16.66■□□□□ 0.26
CNTD1-204ENST00000588408 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
CNTD1-204ENST00000588408 SEC62Q99442 399 aaKnown RBP16.66■□□□□ 0.26
CNTD1-204ENST00000588408 SLC27A2O14975 620 aa16.66■□□□□ 0.26
CNTD1-204ENST00000588408 CCDC129Q6ZRS4 1044 aa16.66■□□□□ 0.26
CNTD1-204ENST00000588408 MED23Q9ULK4 1368 aa16.66■□□□□ 0.26
CNTD1-204ENST00000588408 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
CNTD1-204ENST00000588408 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
CNTD1-204ENST00000588408 NECAB1Q8N987 351 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms