RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 SPINK5Q9NQ38 1064 aaPredicted RBP30.27■■■□□ 2.44
CHAF1A-205ENST00000587580 RASSF7Q02833 373 aa30.26■■■□□ 2.43
CHAF1A-205ENST00000587580 C21orf2O43822 256 aa30.25■■■□□ 2.43
CHAF1A-205ENST00000587580 DIEXFQ68CQ4 756 aaKnown RBP30.25■■■□□ 2.43
CHAF1A-205ENST00000587580 RIC3Q7Z5B4 369 aa30.25■■■□□ 2.43
CHAF1A-205ENST00000587580 STK31Q9BXU1 1019 aa30.25■■■□□ 2.43
CHAF1A-205ENST00000587580 MYH16Q9H6N6 1097 aa30.25■■■□□ 2.43
CHAF1A-205ENST00000587580 SBF1O95248 1867 aa30.25■■■□□ 2.43
CHAF1A-205ENST00000587580 RNF123Q5XPI4 1314 aa30.24■■■□□ 2.43
CHAF1A-205ENST00000587580 TCERG1O14776 1098 aaKnown RBP30.24■■■□□ 2.43
CHAF1A-205ENST00000587580 CRY2Q49AN0 593 aa30.24■■■□□ 2.43
CHAF1A-205ENST00000587580 C9orf131Q5VYM1 1079 aa30.24■■■□□ 2.43
CHAF1A-205ENST00000587580 ZNF521Q96K83 1311 aa30.23■■■□□ 2.43
CHAF1A-205ENST00000587580 EXOSC9Q06265 439 aaKnown RBP30.23■■■□□ 2.43
CHAF1A-205ENST00000587580 ATP5J2-PTCD1G3V325 749 aa30.22■■■□□ 2.43
CHAF1A-205ENST00000587580 ISCA1Q9BUE6 129 aa30.22■■■□□ 2.43
CHAF1A-205ENST00000587580 RNF181Q9P0P0 153 aa30.22■■■□□ 2.43
CHAF1A-205ENST00000587580 TRMT112Q9UI30 125 aaKnown RBP30.22■■■□□ 2.43
CHAF1A-205ENST00000587580 FER1L6Q2WGJ9 1857 aa30.21■■■□□ 2.43
CHAF1A-205ENST00000587580 RPGRQ92834 1020 aaKnown RBP30.21■■■□□ 2.43
CHAF1A-205ENST00000587580 ZNF428Q96B54 188 aa30.21■■■□□ 2.43
CHAF1A-205ENST00000587580 NFKBIEO00221 500 aa30.2■■■□□ 2.43
CHAF1A-205ENST00000587580 DDX58O95786 925 aaKnown RBP30.2■■■□□ 2.43
CHAF1A-205ENST00000587580 ALDH1B1P30837 517 aa30.19■■■□□ 2.42
CHAF1A-205ENST00000587580 C3orf67Q6ZVT6 689 aa30.19■■■□□ 2.42
CHAF1A-205ENST00000587580 ZNF526Q8TF50 670 aaPredicted RBP30.19■■■□□ 2.42
CHAF1A-205ENST00000587580 NLRP3Q96P20 1036 aa30.19■■■□□ 2.42
CHAF1A-205ENST00000587580 SH3TC1Q8TE82 1336 aa30.19■■■□□ 2.42
CHAF1A-205ENST00000587580 LAMB2P55268 1798 aa30.18■■■□□ 2.42
CHAF1A-205ENST00000587580 VAMP4O75379 141 aa30.18■■■□□ 2.42
CHAF1A-205ENST00000587580 SLC10A5Q5PT55 438 aa30.18■■■□□ 2.42
CHAF1A-205ENST00000587580 SOGA3Q5TF21 947 aa30.18■■■□□ 2.42
CHAF1A-205ENST00000587580 CCDC88AQ3V6T2 1871 aa30.17■■■□□ 2.42
CHAF1A-205ENST00000587580 SYNE4Q8N205 404 aa30.17■■■□□ 2.42
CHAF1A-205ENST00000587580 MYD88Q99836 296 aa30.17■■■□□ 2.42
CHAF1A-205ENST00000587580 SLC4A2P04920 1241 aa30.16■■■□□ 2.42
CHAF1A-205ENST00000587580 HCLS1P14317 486 aaPredicted RBP30.16■■■□□ 2.42
CHAF1A-205ENST00000587580 LMNB1P20700 586 aa30.16■■■□□ 2.42
CHAF1A-205ENST00000587580 GPBP1L1Q9HC44 474 aaPredicted RBP30.16■■■□□ 2.42
CHAF1A-205ENST00000587580 HOXA10P31260 410 aaPredicted RBP30.15■■■□□ 2.42
CHAF1A-205ENST00000587580 PRELPP51888 382 aa30.15■■■□□ 2.42
CHAF1A-205ENST00000587580 TRIM28Q13263 835 aaKnown RBP30.15■■■□□ 2.42
CHAF1A-205ENST00000587580 C7orf43Q8WVR3 580 aa30.15■■■□□ 2.42
CHAF1A-205ENST00000587580 RBM17Q96I25 401 aaKnown RBP30.15■■■□□ 2.42
CHAF1A-205ENST00000587580 DDX60Q8IY21 1712 aaKnown RBP30.15■■■□□ 2.42
CHAF1A-205ENST00000587580 CACNA1FO60840 1977 aa30.15■■■□□ 2.42
CHAF1A-205ENST00000587580 CCDC93Q567U6 631 aa30.14■■■□□ 2.42
CHAF1A-205ENST00000587580 G2E3Q7L622 706 aa30.14■■■□□ 2.42
CHAF1A-205ENST00000587580 MIER1Q8N108 512 aa30.14■■■□□ 2.42
CHAF1A-205ENST00000587580 METTL22Q9BUU2 404 aaPredicted RBP30.14■■■□□ 2.42
CHAF1A-205ENST00000587580 TAOK3Q9H2K8 898 aa30.14■■■□□ 2.42
CHAF1A-205ENST00000587580 MAP3K2Q9Y2U5 619 aa30.14■■■□□ 2.42
CHAF1A-205ENST00000587580 TIAM2Q8IVF5 1701 aa30.13■■■□□ 2.41
CHAF1A-205ENST00000587580 KSR2Q6VAB6 950 aa30.13■■■□□ 2.41
CHAF1A-205ENST00000587580 PI4KAP2A4QPH2 592 aa30.12■■■□□ 2.41
CHAF1A-205ENST00000587580 PI4KAP1Q8N8J0 262 aa30.12■■■□□ 2.41
CHAF1A-205ENST00000587580 FAM89AQ96GI7 184 aa30.12■■■□□ 2.41
CHAF1A-205ENST00000587580 CRAMP1Q96RY5 1269 aa30.12■■■□□ 2.41
CHAF1A-205ENST00000587580 LTBP3Q9NS15 1303 aa30.12■■■□□ 2.41
CHAF1A-205ENST00000587580 OLFM4Q6UX06 510 aa30.11■■■□□ 2.41
CHAF1A-205ENST00000587580 FLIIQ13045 1269 aa30.1■■■□□ 2.41
CHAF1A-205ENST00000587580 RTL5Q5HYW3 569 aaPredicted RBP30.1■■■□□ 2.41
CHAF1A-205ENST00000587580 E9PSI1 815 aa30.09■■■□□ 2.41
CHAF1A-205ENST00000587580 CCDC191Q8NCU4 936 aa30.09■■■□□ 2.41
CHAF1A-205ENST00000587580 DICER1Q9UPY3 1922 aaKnown RBP30.08■■■□□ 2.41
CHAF1A-205ENST00000587580 CWC25Q9NXE8 425 aaPredicted RBP30.08■■■□□ 2.41
CHAF1A-205ENST00000587580 ABCC4O15439 1325 aa30.07■■■□□ 2.4
CHAF1A-205ENST00000587580 ZC3H4Q9UPT8 1303 aaKnown RBP30.07■■■□□ 2.4
CHAF1A-205ENST00000587580 PPEF1O14829 653 aaPredicted RBP30.07■■■□□ 2.4
CHAF1A-205ENST00000587580 ZBTB38Q8NAP3 1195 aaPredicted RBP30.07■■■□□ 2.4
CHAF1A-205ENST00000587580 NEXNQ0ZGT2 675 aa30.06■■■□□ 2.4
CHAF1A-205ENST00000587580 FKBP5Q13451 457 aaPredicted RBP30.06■■■□□ 2.4
CHAF1A-205ENST00000587580 RTKN2Q8IZC4 609 aa30.06■■■□□ 2.4
CHAF1A-205ENST00000587580 IRS4O14654 1257 aaPredicted RBP30.05■■■□□ 2.4
CHAF1A-205ENST00000587580 FKBP4Q02790 459 aaKnown RBP eCLIP30.05■■■□□ 2.4
CHAF1A-205ENST00000587580 SLFN5Q08AF3 891 aa30.04■■■□□ 2.4
CHAF1A-205ENST00000587580 DDX46Q7L014 1031 aaKnown RBP30.04■■■□□ 2.4
CHAF1A-205ENST00000587580 SNED1Q8TER0 1413 aa30.04■■■□□ 2.4
CHAF1A-205ENST00000587580 PCCAP05165 728 aaPredicted RBP30.03■■■□□ 2.4
CHAF1A-205ENST00000587580 IGKV5-2P06315 115 aa30.03■■■□□ 2.4
CHAF1A-205ENST00000587580 CC2D2BQ6DHV5 1058 aa30.03■■■□□ 2.4
CHAF1A-205ENST00000587580 SLC51AQ86UW1 340 aa30.02■■■□□ 2.4
CHAF1A-205ENST00000587580 CDCA7LQ96GN5 454 aa30.02■■■□□ 2.4
CHAF1A-205ENST00000587580 KDM2BQ8NHM5 1336 aa30.01■■■□□ 2.4
CHAF1A-205ENST00000587580 CWF19L2Q2TBE0 894 aaKnown RBP30.01■■■□□ 2.39
CHAF1A-205ENST00000587580 DNAAF4Q8WXU2 420 aa30.01■■■□□ 2.39
CHAF1A-205ENST00000587580 JARID2Q92833 1246 aaPredicted RBP30.01■■■□□ 2.39
CHAF1A-205ENST00000587580 TAF1P21675 1872 aa30.01■■■□□ 2.39
CHAF1A-205ENST00000587580 HSP90B1P14625 803 aaKnown RBP30■■■□□ 2.39
CHAF1A-205ENST00000587580 GRAPQ13588 217 aa30■■■□□ 2.39
CHAF1A-205ENST00000587580 SF3B3Q15393 1217 aaKnown RBP30■■■□□ 2.39
CHAF1A-205ENST00000587580 GRAPLQ8TC17 118 aaPredicted RBP30■■■□□ 2.39
CHAF1A-205ENST00000587580 ZNF277Q9NRM2 450 aaPredicted RBP30■■■□□ 2.39
CHAF1A-205ENST00000587580 NEURL1BA8MQ27 555 aa29.99■■■□□ 2.39
CHAF1A-205ENST00000587580 TMX4Q9H1E5 349 aaPredicted RBP29.99■■■□□ 2.39
CHAF1A-205ENST00000587580 NMRK2Q9NPI5 230 aa29.99■■■□□ 2.39
CHAF1A-205ENST00000587580 PSMD1Q99460 953 aa29.98■■■□□ 2.39
CHAF1A-205ENST00000587580 ATP6V0A2Q9Y487 856 aa29.98■■■□□ 2.39
CHAF1A-205ENST00000587580 KIF3CO14782 793 aa29.97■■■□□ 2.39
CHAF1A-205ENST00000587580 BBOX1O75936 387 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms