RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 FER1L6Q2WGJ9 1857 aa30.23■■■□□ 2.43
LSM7-204ENST00000587502 PRELPP51888 382 aa30.22■■■□□ 2.43
LSM7-204ENST00000587502 TCIRG1Q13488 830 aa30.22■■■□□ 2.43
LSM7-204ENST00000587502 PLBD2Q8NHP8 589 aa30.21■■■□□ 2.43
LSM7-204ENST00000587502 RPGRQ92834 1020 aaKnown RBP30.21■■■□□ 2.43
LSM7-204ENST00000587502 NMRK2Q9NPI5 230 aa30.21■■■□□ 2.43
LSM7-204ENST00000587502 CACNA1SQ13698 1873 aa30.21■■■□□ 2.43
LSM7-204ENST00000587502 TOMM70O94826 608 aa30.2■■■□□ 2.43
LSM7-204ENST00000587502 ANKRD13DQ6ZTN6 518 aa30.2■■■□□ 2.43
LSM7-204ENST00000587502 RTKN2Q8IZC4 609 aa30.2■■■□□ 2.43
LSM7-204ENST00000587502 GLTPD2A6NH11 291 aa30.19■■■□□ 2.42
LSM7-204ENST00000587502 HOXA10P31260 410 aaPredicted RBP30.19■■■□□ 2.42
LSM7-204ENST00000587502 SLC10A5Q5PT55 438 aa30.19■■■□□ 2.42
LSM7-204ENST00000587502 C16orf71Q8IYS4 520 aaPredicted RBP30.19■■■□□ 2.42
LSM7-204ENST00000587502 NLRP3Q96P20 1036 aa30.19■■■□□ 2.42
LSM7-204ENST00000587502 CCDC88AQ3V6T2 1871 aa30.19■■■□□ 2.42
LSM7-204ENST00000587502 NLRP10Q86W26 655 aa30.18■■■□□ 2.42
LSM7-204ENST00000587502 RBM17Q96I25 401 aaKnown RBP30.18■■■□□ 2.42
LSM7-204ENST00000587502 DPY19L2Q6NUT2 758 aa30.17■■■□□ 2.42
LSM7-204ENST00000587502 WWC1Q8IX03 1113 aa30.17■■■□□ 2.42
LSM7-204ENST00000587502 TNRC6CQ9HCJ0 1690 aaKnown RBP30.17■■■□□ 2.42
LSM7-204ENST00000587502 CC2D2BQ6DHV5 1058 aa30.16■■■□□ 2.42
LSM7-204ENST00000587502 CRAMP1Q96RY5 1269 aa30.16■■■□□ 2.42
LSM7-204ENST00000587502 ANKRD36CQ5JPF3 1778 aa30.15■■■□□ 2.42
LSM7-204ENST00000587502 FKBP4Q02790 459 aaKnown RBP eCLIP30.15■■■□□ 2.42
LSM7-204ENST00000587502 ELL2O00472 640 aaPredicted RBP30.14■■■□□ 2.42
LSM7-204ENST00000587502 GRIPAP1Q4V328 841 aa30.14■■■□□ 2.42
LSM7-204ENST00000587502 C8orf58Q8NAV2 365 aa30.14■■■□□ 2.42
LSM7-204ENST00000587502 RRAGCQ9HB90 399 aa30.14■■■□□ 2.42
LSM7-204ENST00000587502 TRMT112Q9UI30 125 aaKnown RBP30.14■■■□□ 2.42
LSM7-204ENST00000587502 IL16Q14005 1332 aa30.14■■■□□ 2.42
LSM7-204ENST00000587502 DICER1Q9UPY3 1922 aaKnown RBP30.14■■■□□ 2.41
LSM7-204ENST00000587502 CCDC30Q5VVM6 783 aa30.13■■■□□ 2.41
LSM7-204ENST00000587502 TIAM2Q8IVF5 1701 aa30.13■■■□□ 2.41
LSM7-204ENST00000587502 GOLGA2Q08379 1002 aa30.12■■■□□ 2.41
LSM7-204ENST00000587502 RBM46Q8TBY0 533 aaKnown RBP30.12■■■□□ 2.41
LSM7-204ENST00000587502 SH3TC1Q8TE82 1336 aa30.12■■■□□ 2.41
LSM7-204ENST00000587502 HSPA6P17066 643 aa30.11■■■□□ 2.41
LSM7-204ENST00000587502 VEGFAP15692 232 aaPredicted RBP30.1■■■□□ 2.41
LSM7-204ENST00000587502 ISCA1Q9BUE6 129 aa30.1■■■□□ 2.41
LSM7-204ENST00000587502 TRIM28Q13263 835 aaKnown RBP30.09■■■□□ 2.41
LSM7-204ENST00000587502 RIC3Q7Z5B4 369 aa30.09■■■□□ 2.41
LSM7-204ENST00000587502 TMX4Q9H1E5 349 aaPredicted RBP30.09■■■□□ 2.41
LSM7-204ENST00000587502 TSR2Q969E8 191 aaKnown RBP30.08■■■□□ 2.41
LSM7-204ENST00000587502 PSMD1Q99460 953 aa30.08■■■□□ 2.41
LSM7-204ENST00000587502 PPEF1O14829 653 aaPredicted RBP30.07■■■□□ 2.4
LSM7-204ENST00000587502 DDX58O95786 925 aaKnown RBP30.07■■■□□ 2.4
LSM7-204ENST00000587502 OLFM4Q6UX06 510 aa30.07■■■□□ 2.4
LSM7-204ENST00000587502 C3orf67Q6ZVT6 689 aa30.07■■■□□ 2.4
LSM7-204ENST00000587502 WDR63Q8IWG1 891 aa30.07■■■□□ 2.4
LSM7-204ENST00000587502 FSTL1Q12841 308 aa30.06■■■□□ 2.4
LSM7-204ENST00000587502 SYNE4Q8N205 404 aa30.06■■■□□ 2.4
LSM7-204ENST00000587502 ZNF277Q9NRM2 450 aaPredicted RBP30.06■■■□□ 2.4
LSM7-204ENST00000587502 HCLS1P14317 486 aaPredicted RBP30.05■■■□□ 2.4
LSM7-204ENST00000587502 TSPYL6Q8N831 410 aa30.05■■■□□ 2.4
LSM7-204ENST00000587502 PHAXQ9H814 394 aaKnown RBP30.05■■■□□ 2.4
LSM7-204ENST00000587502 ATP5J2-PTCD1G3V325 749 aa30.04■■■□□ 2.4
LSM7-204ENST00000587502 STK31Q9BXU1 1019 aa30.04■■■□□ 2.4
LSM7-204ENST00000587502 BBOX1O75936 387 aa30.03■■■□□ 2.4
LSM7-204ENST00000587502 IARSP41252 1262 aaKnown RBP30.03■■■□□ 2.4
LSM7-204ENST00000587502 DDX46Q7L014 1031 aaKnown RBP30.03■■■□□ 2.4
LSM7-204ENST00000587502 FAM9BQ8IZU0 186 aa30.03■■■□□ 2.4
LSM7-204ENST00000587502 HSP90B1P14625 803 aaKnown RBP30.02■■■□□ 2.4
LSM7-204ENST00000587502 TWISTNBQ3B726 338 aaPredicted RBP30.02■■■□□ 2.4
LSM7-204ENST00000587502 CEP350Q5VT06 3117 aa30.02■■■□□ 2.4
LSM7-204ENST00000587502 ABCC4O15439 1325 aa30.01■■■□□ 2.4
LSM7-204ENST00000587502 ATP6V0A2Q9Y487 856 aa30.01■■■□□ 2.39
LSM7-204ENST00000587502 SNED1Q8TER0 1413 aa30.01■■■□□ 2.39
LSM7-204ENST00000587502 WDR90Q96KV7 1748 aa30.01■■■□□ 2.39
LSM7-204ENST00000587502 APLP1P51693 650 aa30■■■□□ 2.39
LSM7-204ENST00000587502 SMC1BQ8NDV3 1235 aa30■■■□□ 2.39
LSM7-204ENST00000587502 FAM89AQ96GI7 184 aa30■■■□□ 2.39
LSM7-204ENST00000587502 SALL2Q9Y467 1007 aaPredicted RBP30■■■□□ 2.39
LSM7-204ENST00000587502 JDP2Q8WYK2 163 aa29.99■■■□□ 2.39
LSM7-204ENST00000587502 TMC4Q7Z404 712 aa29.98■■■□□ 2.39
LSM7-204ENST00000587502 ZBTB38Q8NAP3 1195 aaPredicted RBP29.98■■■□□ 2.39
LSM7-204ENST00000587502 CCDC191Q8NCU4 936 aa29.98■■■□□ 2.39
LSM7-204ENST00000587502 TCERG1O14776 1098 aaKnown RBP29.97■■■□□ 2.39
LSM7-204ENST00000587502 DDNO94850 711 aaPredicted RBP29.97■■■□□ 2.39
LSM7-204ENST00000587502 GRAPQ13588 217 aa29.97■■■□□ 2.39
LSM7-204ENST00000587502 SP8Q8IXZ3 490 aa29.97■■■□□ 2.39
LSM7-204ENST00000587502 GRAPLQ8TC17 118 aaPredicted RBP29.97■■■□□ 2.39
LSM7-204ENST00000587502 MYD88Q99836 296 aa29.97■■■□□ 2.39
LSM7-204ENST00000587502 METTL22Q9BUU2 404 aaPredicted RBP29.97■■■□□ 2.39
LSM7-204ENST00000587502 VPS33BQ9H267 617 aa29.97■■■□□ 2.39
LSM7-204ENST00000587502 FANCIQ9NVI1 1328 aa29.96■■■□□ 2.39
LSM7-204ENST00000587502 IQCA1LA6NCM1 817 aa29.96■■■□□ 2.39
LSM7-204ENST00000587502 POTECB2RU33 542 aa29.96■■■□□ 2.39
LSM7-204ENST00000587502 SF3B3Q15393 1217 aaKnown RBP29.96■■■□□ 2.39
LSM7-204ENST00000587502 LAMB2P55268 1798 aa29.95■■■□□ 2.39
LSM7-204ENST00000587502 FZD9O00144 591 aa29.95■■■□□ 2.39
LSM7-204ENST00000587502 IRS4O14654 1257 aaPredicted RBP29.95■■■□□ 2.39
LSM7-204ENST00000587502 KSR2Q6VAB6 950 aa29.95■■■□□ 2.39
LSM7-204ENST00000587502 SUPT20HQ8NEM7 779 aa29.95■■■□□ 2.39
LSM7-204ENST00000587502 L3MBTL3Q96JM7 780 aaPredicted RBP29.95■■■□□ 2.39
LSM7-204ENST00000587502 ZNF428Q96B54 188 aa29.94■■■□□ 2.38
LSM7-204ENST00000587502 CWC25Q9NXE8 425 aaPredicted RBP29.94■■■□□ 2.38
LSM7-204ENST00000587502 LARGE2Q8N3Y3 721 aa29.93■■■□□ 2.38
LSM7-204ENST00000587502 MAP3K2Q9Y2U5 619 aa29.93■■■□□ 2.38
LSM7-204ENST00000587502 SLC4A2P04920 1241 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms