RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 PDZRN3Q9UPQ7 1066 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 ATP10DQ9P241 1426 aa8.36□□□□□ -1.07
NPC1-206ENST00000587223 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 UBN2Q6ZU65 1347 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 SCN7AQ01118 1682 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 CHRNA5P30532 468 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 TRIM28Q13263 835 aaKnown RBP8.35□□□□□ -1.07
NPC1-206ENST00000587223 ALDH1L2Q3SY69 923 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 ERFEQ4G0M1 354 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 NUTM1Q86Y26 1132 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 MRPL50Q8N5N7 158 aaKnown RBP8.35□□□□□ -1.07
NPC1-206ENST00000587223 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 ZNF622Q969S3 477 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPC1-206ENST00000587223 ISCA1Q9BUE6 129 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 PIM2Q9P1W9 311 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 TRMT112Q9UI30 125 aaKnown RBP8.35□□□□□ -1.07
NPC1-206ENST00000587223 WWC3Q9ULE0 1092 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 AFDNP55196 1824 aaKnown RBP8.35□□□□□ -1.07
NPC1-206ENST00000587223 C10orf71Q711Q0 1435 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 BCORQ6W2J9 1755 aa8.35□□□□□ -1.07
NPC1-206ENST00000587223 NTSR2O95665 410 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 KCNA3P22001 575 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 SLC10A5Q5PT55 438 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 CCDC191Q8NCU4 936 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 DNAAF4Q8WXU2 420 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 BCL2L13Q9BXK5 485 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 SMC4Q9NTJ3 1288 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
NPC1-206ENST00000587223 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
NPC1-206ENST00000587223 F6X3S4 739 aa8.33□□□□□ -1.08
NPC1-206ENST00000587223 GRIN3BO60391 1043 aa8.33□□□□□ -1.08
NPC1-206ENST00000587223 RARSP54136 660 aaKnown RBP8.33□□□□□ -1.08
NPC1-206ENST00000587223 DALRD3Q5D0E6 543 aaKnown RBP8.33□□□□□ -1.08
NPC1-206ENST00000587223 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
NPC1-206ENST00000587223 SLC4A10Q6U841 1118 aa8.33□□□□□ -1.08
NPC1-206ENST00000587223 FAM89AQ96GI7 184 aa8.33□□□□□ -1.08
NPC1-206ENST00000587223 MASTLQ96GX5 879 aa8.33□□□□□ -1.08
NPC1-206ENST00000587223 YTHDC1Q96MU7 727 aaKnown RBP8.33□□□□□ -1.08
NPC1-206ENST00000587223 CWC25Q9NXE8 425 aaPredicted RBP8.33□□□□□ -1.08
NPC1-206ENST00000587223 ADCY9O60503 1353 aa8.33□□□□□ -1.08
NPC1-206ENST00000587223 RNF123Q5XPI4 1314 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 KLRG2A4D1S0 409 aaPredicted RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 NEURL1BA8MQ27 555 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 ABCB7O75027 752 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 SRGNP10124 158 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 HCLS1P14317 486 aaPredicted RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 HSP90B1P14625 803 aaKnown RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 NPR1P16066 1061 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.08
NPC1-206ENST00000587223 STYK1Q6J9G0 422 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 SYNE4Q8N205 404 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 TTLL6Q8N841 843 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 LINS1Q8NG48 757 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 JARID2Q92833 1246 aaPredicted RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 CNKSR1Q969H4 720 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 NOB1Q9ULX3 412 aaKnown RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 IBTKQ9P2D0 1353 aaPredicted RBP8.32□□□□□ -1.08
NPC1-206ENST00000587223 PXDNLA1KZ92 1463 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 NRXN2Q9P2S2 1712 aa8.32□□□□□ -1.08
NPC1-206ENST00000587223 PTPRCP08575 1304 aa8.31□□□□□ -1.08
NPC1-206ENST00000587223 KIF13BQ9NQT8 1826 aa8.31□□□□□ -1.08
NPC1-206ENST00000587223 N4BP2Q86UW6 1770 aaPredicted RBP8.31□□□□□ -1.08
NPC1-206ENST00000587223 IRS4O14654 1257 aaPredicted RBP8.31□□□□□ -1.08
NPC1-206ENST00000587223 IPO8O15397 1037 aaKnown RBP8.31□□□□□ -1.08
NPC1-206ENST00000587223 PCCAP05165 728 aaPredicted RBP8.31□□□□□ -1.08
NPC1-206ENST00000587223 ALDH1B1P30837 517 aa8.31□□□□□ -1.08
NPC1-206ENST00000587223 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
NPC1-206ENST00000587223 CWF19L2Q2TBE0 894 aaKnown RBP8.31□□□□□ -1.08
NPC1-206ENST00000587223 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
NPC1-206ENST00000587223 RBM17Q96I25 401 aaKnown RBP8.31□□□□□ -1.08
NPC1-206ENST00000587223 BCAR3O75815 825 aa8.3□□□□□ -1.08
NPC1-206ENST00000587223 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
NPC1-206ENST00000587223 C1QBPQ07021 282 aaKnown RBP8.3□□□□□ -1.08
NPC1-206ENST00000587223 GCKRQ14397 625 aa8.3□□□□□ -1.08
NPC1-206ENST00000587223 BEND3Q5T5X7 828 aa8.3□□□□□ -1.08
NPC1-206ENST00000587223 FRAT1Q92837 279 aaPredicted RBP8.3□□□□□ -1.08
NPC1-206ENST00000587223 API5Q9BZZ5 524 aaKnown RBP8.3□□□□□ -1.08
NPC1-206ENST00000587223 SRCIN1Q9C0H9 1055 aa8.3□□□□□ -1.08
NPC1-206ENST00000587223 C9orf78Q9NZ63 289 aaPredicted RBP8.3□□□□□ -1.08
NPC1-206ENST00000587223 ABCC12Q96J65 1359 aa8.3□□□□□ -1.08
NPC1-206ENST00000587223 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
NPC1-206ENST00000587223 H7C1W4 665 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 C21orf2O43822 256 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 PDE8AO60658 829 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 ALDH1L1O75891 902 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
NPC1-206ENST00000587223 CRY2Q49AN0 593 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 C3orf67Q6ZVT6 689 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 DDX46Q7L014 1031 aaKnown RBP8.29□□□□□ -1.08
NPC1-206ENST00000587223 UBE3BQ7Z3V4 1068 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 ARHGAP45Q92619 1136 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 CRAMP1Q96RY5 1269 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 TMX4Q9H1E5 349 aaPredicted RBP8.29□□□□□ -1.08
NPC1-206ENST00000587223 ANKRD36CQ5JPF3 1778 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 ANKRD31Q8N7Z5 1873 aa8.29□□□□□ -1.08
NPC1-206ENST00000587223 KIF16BQ96L93 1317 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms