RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 MASTLQ96GX5 879 aa28.72■■■□□ 2.19
DDX39A-205ENST00000586993 SBF1O95248 1867 aa28.72■■■□□ 2.19
DDX39A-205ENST00000586993 PPP1R42Q7Z4L9 355 aa28.71■■■□□ 2.19
DDX39A-205ENST00000586993 ZNF428Q96B54 188 aa28.71■■■□□ 2.19
DDX39A-205ENST00000586993 PRPF40BQ6NWY9 871 aaKnown RBP28.7■■■□□ 2.18
DDX39A-205ENST00000586993 C3orf67Q6ZVT6 689 aa28.7■■■□□ 2.18
DDX39A-205ENST00000586993 UTP14AQ9BVJ6 771 aaKnown RBP28.7■■■□□ 2.18
DDX39A-205ENST00000586993 NPR1P16066 1061 aa28.69■■■□□ 2.18
DDX39A-205ENST00000586993 GOLGA2Q08379 1002 aa28.69■■■□□ 2.18
DDX39A-205ENST00000586993 CRY2Q49AN0 593 aa28.69■■■□□ 2.18
DDX39A-205ENST00000586993 ISCA1Q9BUE6 129 aa28.69■■■□□ 2.18
DDX39A-205ENST00000586993 ZNF219Q9P2Y4 722 aaPredicted RBP28.69■■■□□ 2.18
DDX39A-205ENST00000586993 LAMB2P55268 1798 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 ATP5J2-PTCD1G3V325 749 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 RASSF7Q02833 373 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 SYNE4Q8N205 404 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 CNKSR1Q969H4 720 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 CHMP4AQ9BY43 222 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 MYH16Q9H6N6 1097 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 FER1L6Q2WGJ9 1857 aa28.68■■■□□ 2.18
DDX39A-205ENST00000586993 C21orf2O43822 256 aa28.67■■■□□ 2.18
DDX39A-205ENST00000586993 VAMP4O75379 141 aa28.67■■■□□ 2.18
DDX39A-205ENST00000586993 PRELPP51888 382 aa28.66■■■□□ 2.18
DDX39A-205ENST00000586993 G2E3Q7L622 706 aa28.66■■■□□ 2.18
DDX39A-205ENST00000586993 RIC3Q7Z5B4 369 aa28.66■■■□□ 2.18
DDX39A-205ENST00000586993 STK31Q9BXU1 1019 aa28.66■■■□□ 2.18
DDX39A-205ENST00000586993 NFKBIEO00221 500 aa28.65■■■□□ 2.18
DDX39A-205ENST00000586993 DDX60Q8IY21 1712 aaKnown RBP28.65■■■□□ 2.18
DDX39A-205ENST00000586993 RNF123Q5XPI4 1314 aa28.65■■■□□ 2.18
DDX39A-205ENST00000586993 CACNA1FO60840 1977 aa28.64■■■□□ 2.18
DDX39A-205ENST00000586993 SLC10A5Q5PT55 438 aa28.64■■■□□ 2.18
DDX39A-205ENST00000586993 C9orf131Q5VYM1 1079 aa28.64■■■□□ 2.18
DDX39A-205ENST00000586993 C7orf43Q8WVR3 580 aa28.64■■■□□ 2.18
DDX39A-205ENST00000586993 TRMT112Q9UI30 125 aaKnown RBP28.64■■■□□ 2.18
DDX39A-205ENST00000586993 CCDC88AQ3V6T2 1871 aa28.63■■■□□ 2.17
DDX39A-205ENST00000586993 SLC4A2P04920 1241 aa28.63■■■□□ 2.17
DDX39A-205ENST00000586993 HCLS1P14317 486 aaPredicted RBP28.62■■■□□ 2.17
DDX39A-205ENST00000586993 TRIM28Q13263 835 aaKnown RBP28.62■■■□□ 2.17
DDX39A-205ENST00000586993 SH3TC1Q8TE82 1336 aa28.62■■■□□ 2.17
DDX39A-205ENST00000586993 OLFM4Q6UX06 510 aa28.61■■■□□ 2.17
DDX39A-205ENST00000586993 MYD88Q99836 296 aa28.61■■■□□ 2.17
DDX39A-205ENST00000586993 HOXA10P31260 410 aaPredicted RBP28.6■■■□□ 2.17
DDX39A-205ENST00000586993 RNF181Q9P0P0 153 aa28.6■■■□□ 2.17
DDX39A-205ENST00000586993 MAP3K2Q9Y2U5 619 aa28.6■■■□□ 2.17
DDX39A-205ENST00000586993 PI4KAP2A4QPH2 592 aa28.59■■■□□ 2.17
DDX39A-205ENST00000586993 DDX58O95786 925 aaKnown RBP28.59■■■□□ 2.17
DDX39A-205ENST00000586993 KSR2Q6VAB6 950 aa28.59■■■□□ 2.17
DDX39A-205ENST00000586993 SLC51AQ86UW1 340 aa28.59■■■□□ 2.17
DDX39A-205ENST00000586993 PI4KAP1Q8N8J0 262 aa28.59■■■□□ 2.17
DDX39A-205ENST00000586993 RPGRQ92834 1020 aaKnown RBP28.59■■■□□ 2.17
DDX39A-205ENST00000586993 METTL22Q9BUU2 404 aaPredicted RBP28.59■■■□□ 2.17
DDX39A-205ENST00000586993 FAM89AQ96GI7 184 aa28.58■■■□□ 2.17
DDX39A-205ENST00000586993 NLRP3Q96P20 1036 aa28.58■■■□□ 2.17
DDX39A-205ENST00000586993 FLIIQ13045 1269 aa28.57■■■□□ 2.16
DDX39A-205ENST00000586993 CDCA7LQ96GN5 454 aa28.57■■■□□ 2.16
DDX39A-205ENST00000586993 E9PSI1 815 aa28.56■■■□□ 2.16
DDX39A-205ENST00000586993 KIF3CO14782 793 aa28.56■■■□□ 2.16
DDX39A-205ENST00000586993 ALDH1B1P30837 517 aa28.56■■■□□ 2.16
DDX39A-205ENST00000586993 SLFN5Q08AF3 891 aa28.56■■■□□ 2.16
DDX39A-205ENST00000586993 RTL5Q5HYW3 569 aaPredicted RBP28.56■■■□□ 2.16
DDX39A-205ENST00000586993 TIAM2Q8IVF5 1701 aa28.56■■■□□ 2.16
DDX39A-205ENST00000586993 TAF1P21675 1872 aa28.55■■■□□ 2.16
DDX39A-205ENST00000586993 SNED1Q8TER0 1413 aa28.55■■■□□ 2.16
DDX39A-205ENST00000586993 LMNB1P20700 586 aa28.55■■■□□ 2.16
DDX39A-205ENST00000586993 CRAMP1Q96RY5 1269 aa28.55■■■□□ 2.16
DDX39A-205ENST00000586993 DICER1Q9UPY3 1922 aaKnown RBP28.54■■■□□ 2.16
DDX39A-205ENST00000586993 IGKV5-2P06315 115 aa28.54■■■□□ 2.16
DDX39A-205ENST00000586993 RBM17Q96I25 401 aaKnown RBP28.54■■■□□ 2.16
DDX39A-205ENST00000586993 LTBP3Q9NS15 1303 aa28.53■■■□□ 2.16
DDX39A-205ENST00000586993 CCDC93Q567U6 631 aa28.53■■■□□ 2.16
DDX39A-205ENST00000586993 SOGA3Q5TF21 947 aa28.53■■■□□ 2.16
DDX39A-205ENST00000586993 CCDC191Q8NCU4 936 aa28.53■■■□□ 2.16
DDX39A-205ENST00000586993 ABCC4O15439 1325 aa28.52■■■□□ 2.16
DDX39A-205ENST00000586993 TAOK3Q9H2K8 898 aa28.52■■■□□ 2.16
DDX39A-205ENST00000586993 COL4A1P02462 1669 aa28.51■■■□□ 2.16
DDX39A-205ENST00000586993 FKBP5Q13451 457 aaPredicted RBP28.51■■■□□ 2.15
DDX39A-205ENST00000586993 ZBTB38Q8NAP3 1195 aaPredicted RBP28.51■■■□□ 2.15
DDX39A-205ENST00000586993 JARID2Q92833 1246 aaPredicted RBP28.51■■■□□ 2.15
DDX39A-205ENST00000586993 CWC25Q9NXE8 425 aaPredicted RBP28.51■■■□□ 2.15
DDX39A-205ENST00000586993 IRS4O14654 1257 aaPredicted RBP28.5■■■□□ 2.15
DDX39A-205ENST00000586993 HSPA6P17066 643 aa28.5■■■□□ 2.15
DDX39A-205ENST00000586993 CEP350Q5VT06 3117 aa28.49■■■□□ 2.15
DDX39A-205ENST00000586993 PCCAP05165 728 aaPredicted RBP28.49■■■□□ 2.15
DDX39A-205ENST00000586993 CWF19L2Q2TBE0 894 aaKnown RBP28.49■■■□□ 2.15
DDX39A-205ENST00000586993 TRMT2AQ8IZ69 625 aaKnown RBP28.49■■■□□ 2.15
DDX39A-205ENST00000586993 PPEF1O14829 653 aaPredicted RBP28.48■■■□□ 2.15
DDX39A-205ENST00000586993 NEURL1BA8MQ27 555 aa28.47■■■□□ 2.15
DDX39A-205ENST00000586993 DNAAF4Q8WXU2 420 aa28.47■■■□□ 2.15
DDX39A-205ENST00000586993 FKBP4Q02790 459 aaKnown RBP eCLIP28.46■■■□□ 2.15
DDX39A-205ENST00000586993 NEXNQ0ZGT2 675 aa28.46■■■□□ 2.15
DDX39A-205ENST00000586993 SF3B3Q15393 1217 aaKnown RBP28.46■■■□□ 2.15
DDX39A-205ENST00000586993 F6X3S4 739 aa28.45■■■□□ 2.14
DDX39A-205ENST00000586993 RTKN2Q8IZC4 609 aa28.45■■■□□ 2.14
DDX39A-205ENST00000586993 ZNF277Q9NRM2 450 aaPredicted RBP28.45■■■□□ 2.14
DDX39A-205ENST00000586993 ZC3H4Q9UPT8 1303 aaKnown RBP28.44■■■□□ 2.14
DDX39A-205ENST00000586993 DDX46Q7L014 1031 aaKnown RBP28.44■■■□□ 2.14
DDX39A-205ENST00000586993 NMRK2Q9NPI5 230 aa28.44■■■□□ 2.14
DDX39A-205ENST00000586993 GRAPQ13588 217 aa28.43■■■□□ 2.14
DDX39A-205ENST00000586993 GRAPLQ8TC17 118 aaPredicted RBP28.43■■■□□ 2.14
DDX39A-205ENST00000586993 LRRC37AA6NMS7 1700 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms