RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 TNRC6CQ9HCJ0 1690 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 ERFEQ4G0M1 354 aa13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 PRPF40BQ6NWY9 871 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 NLRP10Q86W26 655 aa13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 NUTM1Q86Y26 1132 aa13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 CCDC88AQ3V6T2 1871 aa13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 DICER1Q9UPY3 1922 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
SMARCA4-209ENST00000586122 LMNB1P20700 586 aa13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 HOXA10P31260 410 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 TSPYL6Q8N831 410 aa13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 SH3TC1Q8TE82 1336 aa13.38□□□□□ -0.27
SMARCA4-209ENST00000586122 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-209ENST00000586122 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
SMARCA4-209ENST00000586122 C9orf131Q5VYM1 1079 aa13.37□□□□□ -0.27
SMARCA4-209ENST00000586122 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
SMARCA4-209ENST00000586122 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-209ENST00000586122 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-209ENST00000586122 ZNF521Q96K83 1311 aa13.37□□□□□ -0.27
SMARCA4-209ENST00000586122 LAMB2P55268 1798 aa13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 C21orf2O43822 256 aa13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 CCDC93Q567U6 631 aa13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 CRAMP1Q96RY5 1269 aa13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 TAOK3Q9H2K8 898 aa13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 RNF181Q9P0P0 153 aa13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 TRMT112Q9UI30 125 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-209ENST00000586122 SENP3-EIF4A1A0A087X0R7 540 aa13.35□□□□□ -0.27
SMARCA4-209ENST00000586122 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
SMARCA4-209ENST00000586122 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
SMARCA4-209ENST00000586122 PHAXQ9H814 394 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-209ENST00000586122 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 NFKBIEO00221 500 aa13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 VAMP4O75379 141 aa13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 EXOSC9Q06265 439 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 KSR2Q6VAB6 950 aa13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 CCDC191Q8NCU4 936 aa13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 METTL22Q9BUU2 404 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
SMARCA4-209ENST00000586122 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
SMARCA4-209ENST00000586122 E9PSI1 815 aa13.33□□□□□ -0.28
SMARCA4-209ENST00000586122 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
SMARCA4-209ENST00000586122 RASSF7Q02833 373 aa13.33□□□□□ -0.28
SMARCA4-209ENST00000586122 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
SMARCA4-209ENST00000586122 DIEXFQ68CQ4 756 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-209ENST00000586122 TMX4Q9H1E5 349 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-209ENST00000586122 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
SMARCA4-209ENST00000586122 FKBP4Q02790 459 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCA4-209ENST00000586122 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
SMARCA4-209ENST00000586122 ZBTB38Q8NAP3 1195 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-209ENST00000586122 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-209ENST00000586122 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-209ENST00000586122 PI4KAP2A4QPH2 592 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 BBOX1O75936 387 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 FLIIQ13045 1269 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 PI4KAP1Q8N8J0 262 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 PSMD1Q99460 953 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 MYD88Q99836 296 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 MAP3K2Q9Y2U5 619 aa13.31□□□□□ -0.28
SMARCA4-209ENST00000586122 IRS4O14654 1257 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 HCLS1P14317 486 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 MYH3P11055 1940 aa13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 SNED1Q8TER0 1413 aa13.3□□□□□ -0.28
SMARCA4-209ENST00000586122 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-209ENST00000586122 GRAPQ13588 217 aa13.29□□□□□ -0.28
SMARCA4-209ENST00000586122 C3orf67Q6ZVT6 689 aa13.29□□□□□ -0.28
SMARCA4-209ENST00000586122 GRAPLQ8TC17 118 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-209ENST00000586122 ATP6V0A2Q9Y487 856 aa13.29□□□□□ -0.28
SMARCA4-209ENST00000586122 ABCC4O15439 1325 aa13.29□□□□□ -0.28
SMARCA4-209ENST00000586122 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
SMARCA4-209ENST00000586122 GLTPD2A6NH11 291 aa13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 PRELPP51888 382 aa13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 C1QTNF8P60827 252 aa13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 G2E3Q7L622 706 aa13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 SYNE4Q8N205 404 aa13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 VPS33BQ9H267 617 aa13.28□□□□□ -0.28
SMARCA4-209ENST00000586122 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.28
SMARCA4-209ENST00000586122 KIF3CO14782 793 aa13.27□□□□□ -0.29
SMARCA4-209ENST00000586122 PDE8AO60658 829 aa13.27□□□□□ -0.29
SMARCA4-209ENST00000586122 CT47B1P0C2W7 299 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-209ENST00000586122 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
SMARCA4-209ENST00000586122 SP8Q8IXZ3 490 aa13.27□□□□□ -0.29
SMARCA4-209ENST00000586122 SUPT20HQ8NEM7 779 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms