RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 KCTD17Q8N5Z5 321 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 ZNF280CQ8ND82 737 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 TNFRSF25Q93038 417 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 DCAF5Q96JK2 942 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 HSH2DQ96JZ2 352 aa8.15□□□□□ -1.1
ZNF560-202ENST00000585974 NOP53Q9NZM5 478 aaKnown RBP8.15□□□□□ -1.1
ZNF560-202ENST00000585974 SNRPNP63162 240 aaKnown RBP8.14□□□□□ -1.11
ZNF560-202ENST00000585974 NGLY1Q96IV0 654 aa8.14□□□□□ -1.11
ZNF560-202ENST00000585974 MDFIQ99750 246 aa8.14□□□□□ -1.11
ZNF560-202ENST00000585974 HOXB4P17483 251 aaPredicted RBP8.13□□□□□ -1.11
ZNF560-202ENST00000585974 DGKGP49619 791 aa8.13□□□□□ -1.11
ZNF560-202ENST00000585974 C11orf91Q3C1V1 193 aa8.13□□□□□ -1.11
ZNF560-202ENST00000585974 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
ZNF560-202ENST00000585974 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
ZNF560-202ENST00000585974 PBXIP1Q96AQ6 731 aa8.13□□□□□ -1.11
ZNF560-202ENST00000585974 SLC30A3Q99726 388 aa8.12□□□□□ -1.11
ZNF560-202ENST00000585974 DMGDHQ9UI17 866 aaKnown RBP8.12□□□□□ -1.11
ZNF560-202ENST00000585974 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
ZNF560-202ENST00000585974 PRDM6Q9NQX0 595 aa8.11□□□□□ -1.11
ZNF560-202ENST00000585974 SPDYE3A6NKU9 549 aa8.1□□□□□ -1.11
ZNF560-202ENST00000585974 PCSK7Q16549 785 aa8.1□□□□□ -1.11
ZNF560-202ENST00000585974 FAM69CQ0P6D2 419 aa8.09□□□□□ -1.11
ZNF560-202ENST00000585974 CCINQ13939 588 aa8.09□□□□□ -1.11
ZNF560-202ENST00000585974 QTRT2Q9H974 415 aaKnown RBP8.09□□□□□ -1.11
ZNF560-202ENST00000585974 ZMIZ1Q9ULJ6 1067 aa8.09□□□□□ -1.11
ZNF560-202ENST00000585974 BCS1LQ9Y276 419 aa8.09□□□□□ -1.11
ZNF560-202ENST00000585974 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.08□□□□□ -1.12
ZNF560-202ENST00000585974 PTCD1O75127 700 aaKnown RBP8.08□□□□□ -1.12
ZNF560-202ENST00000585974 MICAL2O94851 1124 aa8.08□□□□□ -1.12
ZNF560-202ENST00000585974 INPP5BP32019 993 aa8.08□□□□□ -1.12
ZNF560-202ENST00000585974 ARSDP51689 593 aa8.08□□□□□ -1.12
ZNF560-202ENST00000585974 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
ZNF560-202ENST00000585974 GSX2Q9BZM3 304 aa8.08□□□□□ -1.12
ZNF560-202ENST00000585974 LGR5O75473 907 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 PPP1R15AO75807 674 aaPredicted RBP8.07□□□□□ -1.12
ZNF560-202ENST00000585974 MAP3K6O95382 1288 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 ADH7P40394 386 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 IDH3AP50213 366 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 DGKZQ13574 1117 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 GRIN2CQ14957 1233 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 OCLNQ16625 522 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 PLA2G4EQ3MJ16 856 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 BHMTQ93088 406 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 IFT43Q96FT9 208 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 KLK14Q9P0G3 267 aa8.07□□□□□ -1.12
ZNF560-202ENST00000585974 MSTNO14793 375 aa8.06□□□□□ -1.12
ZNF560-202ENST00000585974 ARID4AP29374 1257 aaPredicted RBP8.06□□□□□ -1.12
ZNF560-202ENST00000585974 FKBP5Q13451 457 aaPredicted RBP8.06□□□□□ -1.12
ZNF560-202ENST00000585974 GPAT2Q6NUI2 795 aa8.06□□□□□ -1.12
ZNF560-202ENST00000585974 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.06□□□□□ -1.12
ZNF560-202ENST00000585974 BRD2P25440 801 aaKnown RBP8.05□□□□□ -1.12
ZNF560-202ENST00000585974 COL8A1P27658 744 aa8.05□□□□□ -1.12
ZNF560-202ENST00000585974 STK32AQ8WU08 396 aa8.05□□□□□ -1.12
ZNF560-202ENST00000585974 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
ZNF560-202ENST00000585974 CXXC1Q9P0U4 656 aaPredicted RBP8.05□□□□□ -1.12
ZNF560-202ENST00000585974 PRMT3O60678 531 aa8.04□□□□□ -1.12
ZNF560-202ENST00000585974 EGFRP00533 1210 aa8.04□□□□□ -1.12
ZNF560-202ENST00000585974 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
ZNF560-202ENST00000585974 C16orf46Q6P387 395 aa8.04□□□□□ -1.12
ZNF560-202ENST00000585974 MICALL1Q8N3F8 863 aa8.04□□□□□ -1.12
ZNF560-202ENST00000585974 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
ZNF560-202ENST00000585974 KRBA1A5PL33 1030 aa8.03□□□□□ -1.12
ZNF560-202ENST00000585974 COX20Q5RI15 118 aa8.03□□□□□ -1.12
ZNF560-202ENST00000585974 PLVAPQ9BX97 442 aa8.03□□□□□ -1.12
ZNF560-202ENST00000585974 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
ZNF560-202ENST00000585974 LRFN2Q9ULH4 789 aa8.03□□□□□ -1.12
ZNF560-202ENST00000585974 M0R082 166 aa8.02□□□□□ -1.13
ZNF560-202ENST00000585974 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
ZNF560-202ENST00000585974 C20orf204Q6ZNR8 217 aa8.02□□□□□ -1.13
ZNF560-202ENST00000585974 ZNF417Q8TAU3 575 aa8.02□□□□□ -1.13
ZNF560-202ENST00000585974 TRIM11Q96F44 468 aa8.02□□□□□ -1.13
ZNF560-202ENST00000585974 ZNF587Q96SQ5 575 aaPredicted RBP8.02□□□□□ -1.13
ZNF560-202ENST00000585974 UBE2OQ9C0C9 1292 aaKnown RBP8.02□□□□□ -1.13
ZNF560-202ENST00000585974 STARD13Q9Y3M8 1113 aa8.02□□□□□ -1.13
ZNF560-202ENST00000585974 OPLAHO14841 1288 aa8.01□□□□□ -1.13
ZNF560-202ENST00000585974 LILRB5O75023 590 aa8.01□□□□□ -1.13
ZNF560-202ENST00000585974 PRRT3Q5FWE3 981 aa8.01□□□□□ -1.13
ZNF560-202ENST00000585974 RAB44Q7Z6P3 723 aaPredicted RBP8.01□□□□□ -1.13
ZNF560-202ENST00000585974 TREML1Q86YW5 311 aa8.01□□□□□ -1.13
ZNF560-202ENST00000585974 SLC6A14Q9UN76 642 aa8.01□□□□□ -1.13
ZNF560-202ENST00000585974 RTCBQ9Y3I0 505 aaKnown RBP8.01□□□□□ -1.13
ZNF560-202ENST00000585974 ARID3CA6NKF2 412 aa8□□□□□ -1.13
ZNF560-202ENST00000585974 ALBP02768 609 aa8□□□□□ -1.13
ZNF560-202ENST00000585974 NFKB1P19838 968 aa8□□□□□ -1.13
ZNF560-202ENST00000585974 C14orf37Q86TY3 774 aa8□□□□□ -1.13
ZNF560-202ENST00000585974 TRPM4Q8TD43 1214 aa8□□□□□ -1.13
ZNF560-202ENST00000585974 SPOCK3Q9BQ16 436 aa8□□□□□ -1.13
ZNF560-202ENST00000585974 DNAJB12Q9NXW2 375 aaKnown RBP8□□□□□ -1.13
ZNF560-202ENST00000585974 ITGB2P05107 769 aa7.99□□□□□ -1.13
ZNF560-202ENST00000585974 TTC9Q92623 222 aa7.99□□□□□ -1.13
ZNF560-202ENST00000585974 FRRS1LQ9P0K9 344 aa7.99□□□□□ -1.13
ZNF560-202ENST00000585974 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
ZNF560-202ENST00000585974 GRNP28799 593 aaKnown RBP7.98□□□□□ -1.13
ZNF560-202ENST00000585974 TRIM28Q13263 835 aaKnown RBP7.98□□□□□ -1.13
ZNF560-202ENST00000585974 COL9A3Q14050 684 aaPredicted RBP7.98□□□□□ -1.13
ZNF560-202ENST00000585974 CCDC82Q8N4S0 544 aa7.98□□□□□ -1.13
ZNF560-202ENST00000585974 ABTB2Q8N961 1025 aa7.98□□□□□ -1.13
ZNF560-202ENST00000585974 NACC1Q96RE7 527 aa7.98□□□□□ -1.13
ZNF560-202ENST00000585974 RARAP10276 462 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms