RNA–Protein interactions for RNA: ENST00000585951.1

CTDP1-203, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 3

Gene CTDP1, Length 381 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-203ENST00000585951 UTP14AQ9BVJ6 771 aaKnown RBP25.41■■□□□ 1.66
CTDP1-203ENST00000585951 CACNA1FO60840 1977 aa25.41■■□□□ 1.66
CTDP1-203ENST00000585951 GOLGA2Q08379 1002 aa25.4■■□□□ 1.66
CTDP1-203ENST00000585951 RNF123Q5XPI4 1314 aa25.39■■□□□ 1.66
CTDP1-203ENST00000585951 CRY2Q49AN0 593 aa25.39■■□□□ 1.66
CTDP1-203ENST00000585951 MYH16Q9H6N6 1097 aa25.39■■□□□ 1.66
CTDP1-203ENST00000585951 PRPF40BQ6NWY9 871 aaKnown RBP25.38■■□□□ 1.65
CTDP1-203ENST00000585951 ISCA1Q9BUE6 129 aa25.38■■□□□ 1.65
CTDP1-203ENST00000585951 FER1L6Q2WGJ9 1857 aa25.37■■□□□ 1.65
CTDP1-203ENST00000585951 STK31Q9BXU1 1019 aa25.37■■□□□ 1.65
CTDP1-203ENST00000585951 EXOSC9Q06265 439 aaKnown RBP25.36■■□□□ 1.65
CTDP1-203ENST00000585951 SLC10A5Q5PT55 438 aa25.36■■□□□ 1.65
CTDP1-203ENST00000585951 RIC3Q7Z5B4 369 aa25.36■■□□□ 1.65
CTDP1-203ENST00000585951 CCDC88AQ3V6T2 1871 aa25.35■■□□□ 1.65
CTDP1-203ENST00000585951 C21orf2O43822 256 aa25.35■■□□□ 1.65
CTDP1-203ENST00000585951 VAMP4O75379 141 aa25.35■■□□□ 1.65
CTDP1-203ENST00000585951 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
CTDP1-203ENST00000585951 TCERG1O14776 1098 aaKnown RBP25.34■■□□□ 1.65
CTDP1-203ENST00000585951 TRIM28Q13263 835 aaKnown RBP25.34■■□□□ 1.65
CTDP1-203ENST00000585951 TRMT112Q9UI30 125 aaKnown RBP25.34■■□□□ 1.65
CTDP1-203ENST00000585951 DDX58O95786 925 aaKnown RBP25.33■■□□□ 1.65
CTDP1-203ENST00000585951 ALDH1B1P30837 517 aa25.33■■□□□ 1.65
CTDP1-203ENST00000585951 RASSF7Q02833 373 aa25.33■■□□□ 1.65
CTDP1-203ENST00000585951 C9orf131Q5VYM1 1079 aa25.33■■□□□ 1.65
CTDP1-203ENST00000585951 C7orf43Q8WVR3 580 aa25.33■■□□□ 1.65
CTDP1-203ENST00000585951 ZNF219Q9P2Y4 722 aaPredicted RBP25.33■■□□□ 1.65
CTDP1-203ENST00000585951 SH3TC1Q8TE82 1336 aa25.33■■□□□ 1.64
CTDP1-203ENST00000585951 LAMB2P55268 1798 aa25.32■■□□□ 1.64
CTDP1-203ENST00000585951 NFKBIEO00221 500 aa25.32■■□□□ 1.64
CTDP1-203ENST00000585951 SLC4A2P04920 1241 aa25.32■■□□□ 1.64
CTDP1-203ENST00000585951 HOXA10P31260 410 aaPredicted RBP25.32■■□□□ 1.64
CTDP1-203ENST00000585951 C3orf67Q6ZVT6 689 aa25.32■■□□□ 1.64
CTDP1-203ENST00000585951 MIER1Q8N108 512 aa25.32■■□□□ 1.64
CTDP1-203ENST00000585951 NLRP3Q96P20 1036 aa25.32■■□□□ 1.64
CTDP1-203ENST00000585951 SOGA3Q5TF21 947 aa25.31■■□□□ 1.64
CTDP1-203ENST00000585951 SYNE4Q8N205 404 aa25.31■■□□□ 1.64
CTDP1-203ENST00000585951 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
CTDP1-203ENST00000585951 DDX60Q8IY21 1712 aaKnown RBP25.3■■□□□ 1.64
CTDP1-203ENST00000585951 METTL22Q9BUU2 404 aaPredicted RBP25.3■■□□□ 1.64
CTDP1-203ENST00000585951 RNF181Q9P0P0 153 aa25.3■■□□□ 1.64
CTDP1-203ENST00000585951 LMNB1P20700 586 aa25.29■■□□□ 1.64
CTDP1-203ENST00000585951 PRELPP51888 382 aa25.29■■□□□ 1.64
CTDP1-203ENST00000585951 KSR2Q6VAB6 950 aa25.29■■□□□ 1.64
CTDP1-203ENST00000585951 G2E3Q7L622 706 aa25.29■■□□□ 1.64
CTDP1-203ENST00000585951 MYD88Q99836 296 aa25.29■■□□□ 1.64
CTDP1-203ENST00000585951 PI4KAP2A4QPH2 592 aa25.28■■□□□ 1.64
CTDP1-203ENST00000585951 HCLS1P14317 486 aaPredicted RBP25.28■■□□□ 1.64
CTDP1-203ENST00000585951 PI4KAP1Q8N8J0 262 aa25.28■■□□□ 1.64
CTDP1-203ENST00000585951 ZNF428Q96B54 188 aa25.28■■□□□ 1.64
CTDP1-203ENST00000585951 RBM17Q96I25 401 aaKnown RBP25.28■■□□□ 1.64
CTDP1-203ENST00000585951 CRAMP1Q96RY5 1269 aa25.28■■□□□ 1.64
CTDP1-203ENST00000585951 MAP3K2Q9Y2U5 619 aa25.28■■□□□ 1.64
CTDP1-203ENST00000585951 LTBP3Q9NS15 1303 aa25.28■■□□□ 1.64
CTDP1-203ENST00000585951 DICER1Q9UPY3 1922 aaKnown RBP25.27■■□□□ 1.64
CTDP1-203ENST00000585951 E9PSI1 815 aa25.27■■□□□ 1.64
CTDP1-203ENST00000585951 FLIIQ13045 1269 aa25.26■■□□□ 1.63
CTDP1-203ENST00000585951 CCDC93Q567U6 631 aa25.26■■□□□ 1.63
CTDP1-203ENST00000585951 CCDC191Q8NCU4 936 aa25.26■■□□□ 1.63
CTDP1-203ENST00000585951 FAM89AQ96GI7 184 aa25.26■■□□□ 1.63
CTDP1-203ENST00000585951 TAOK3Q9H2K8 898 aa25.26■■□□□ 1.63
CTDP1-203ENST00000585951 GPBP1L1Q9HC44 474 aaPredicted RBP25.26■■□□□ 1.63
CTDP1-203ENST00000585951 SLFN5Q08AF3 891 aa25.25■■□□□ 1.63
CTDP1-203ENST00000585951 ZC3H4Q9UPT8 1303 aaKnown RBP25.24■■□□□ 1.63
CTDP1-203ENST00000585951 ZBTB38Q8NAP3 1195 aaPredicted RBP25.24■■□□□ 1.63
CTDP1-203ENST00000585951 ZNF526Q8TF50 670 aaPredicted RBP25.24■■□□□ 1.63
CTDP1-203ENST00000585951 OLFM4Q6UX06 510 aa25.23■■□□□ 1.63
CTDP1-203ENST00000585951 CWC25Q9NXE8 425 aaPredicted RBP25.23■■□□□ 1.63
CTDP1-203ENST00000585951 TIAM2Q8IVF5 1701 aa25.23■■□□□ 1.63
CTDP1-203ENST00000585951 SNED1Q8TER0 1413 aa25.22■■□□□ 1.63
CTDP1-203ENST00000585951 RTL5Q5HYW3 569 aaPredicted RBP25.22■■□□□ 1.63
CTDP1-203ENST00000585951 RTKN2Q8IZC4 609 aa25.22■■□□□ 1.63
CTDP1-203ENST00000585951 TAF1P21675 1872 aa25.21■■□□□ 1.63
CTDP1-203ENST00000585951 ABCC4O15439 1325 aa25.21■■□□□ 1.63
CTDP1-203ENST00000585951 IRS4O14654 1257 aaPredicted RBP25.21■■□□□ 1.63
CTDP1-203ENST00000585951 IGKV5-2P06315 115 aa25.21■■□□□ 1.63
CTDP1-203ENST00000585951 NEXNQ0ZGT2 675 aa25.21■■□□□ 1.63
CTDP1-203ENST00000585951 FKBP5Q13451 457 aaPredicted RBP25.21■■□□□ 1.63
CTDP1-203ENST00000585951 CC2D2BQ6DHV5 1058 aa25.21■■□□□ 1.63
CTDP1-203ENST00000585951 PPEF1O14829 653 aaPredicted RBP25.2■■□□□ 1.62
CTDP1-203ENST00000585951 PCCAP05165 728 aaPredicted RBP25.2■■□□□ 1.62
CTDP1-203ENST00000585951 FKBP4Q02790 459 aaKnown RBP eCLIP25.2■■□□□ 1.62
CTDP1-203ENST00000585951 SF3B3Q15393 1217 aaKnown RBP25.2■■□□□ 1.62
CTDP1-203ENST00000585951 CDCA7LQ96GN5 454 aa25.2■■□□□ 1.62
CTDP1-203ENST00000585951 DDX46Q7L014 1031 aaKnown RBP25.18■■□□□ 1.62
CTDP1-203ENST00000585951 TRMT2AQ8IZ69 625 aaKnown RBP25.18■■□□□ 1.62
CTDP1-203ENST00000585951 DNAAF4Q8WXU2 420 aa25.18■■□□□ 1.62
CTDP1-203ENST00000585951 NEURL1BA8MQ27 555 aa25.17■■□□□ 1.62
CTDP1-203ENST00000585951 BBOX1O75936 387 aa25.17■■□□□ 1.62
CTDP1-203ENST00000585951 HSP90B1P14625 803 aaKnown RBP25.17■■□□□ 1.62
CTDP1-203ENST00000585951 CWF19L2Q2TBE0 894 aaKnown RBP25.17■■□□□ 1.62
CTDP1-203ENST00000585951 GRIPAP1Q4V328 841 aa25.17■■□□□ 1.62
CTDP1-203ENST00000585951 GRAPQ13588 217 aa25.16■■□□□ 1.62
CTDP1-203ENST00000585951 GRAPLQ8TC17 118 aaPredicted RBP25.16■■□□□ 1.62
CTDP1-203ENST00000585951 PSMD1Q99460 953 aa25.16■■□□□ 1.62
CTDP1-203ENST00000585951 ATP6V0A2Q9Y487 856 aa25.16■■□□□ 1.62
CTDP1-203ENST00000585951 CDHR2Q9BYE9 1310 aa25.15■■□□□ 1.62
CTDP1-203ENST00000585951 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
CTDP1-203ENST00000585951 MYH3P11055 1940 aa25.15■■□□□ 1.62
CTDP1-203ENST00000585951 KDM2BQ8NHM5 1336 aa25.14■■□□□ 1.62
CTDP1-203ENST00000585951 JARID2Q92833 1246 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms